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Repository: ome/bio-formats-build
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Merged PRs:
  - PR 604 dependabot[bot] 'Bump bio-formats-examples from `74d4def` to `9955ace`'
  - PR 608 dependabot[bot] 'Bump bioformats from `682bc7e` to `bf2c462`'
  - PR 609 dependabot[bot] 'Bump bio-formats-documentation from `afd4c11` to `7a2cfff`'

Repository: ome/ZarrReader
Excluded PRs:
  - PR 73 dgault 'Update ReadMe and Change Log' (status: failure)
  - PR 20 dgault 'ZarrReader: Use chunk API' (exclude comment)
Already up to date.

Merged PRs:
  - PR 75 dgault 'Update handling and parsing of acquisition metadata'
  - PR 82 dgault 'Reintroduce S3FileSystemStore'

Repository: ome/bio-formats-documentation
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Repository: ome/bio-formats-examples
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Merged PRs:
  - PR 69 dgault 'Add macro examples from OME 2020 NGFF workshop'
  - PR 127 jburel 'Matlab Examples'
  - PR 128 sbesson 'Relicense Bio-Formats examples under BSD 2-clause'

Repository: openmicroscopy/bioformats
Excluded PRs:
  - PR 4181 melissalinkert 'Add support for reading compressed NDPI tiles' (label: exclude)
  - PR 4180 melissalinkert 'Columbus: update to use micrometers instead of `reference frame` for positions' (label: exclude)
  - PR 4172 sbesson 'testSaneUsedFiles: check getCurrentFile is the first file in the getUsedFiles list' (stage: draft)
  - PR 4164 melissalinkert 'Reduce DICOM write time' (stage: draft)
  - PR 4131 dgault 'VirtualImagePlus: Retain B&C settings for each slice' (status: failure)
  - PR 4092 NicoKiaru 'Commits an alternative Zeiss CZI Reader' (user: NicoKiaru)
  - PR 4000 XLEFReaderForBioformats 'Reworking LMSMetadata package and adding a new lif reader' (user: XLEFReaderForBioformats)
  - PR 3898 melissalinkert 'InCell 1000/2000 field count and plane metadata fixes' (stage: draft)
  - PR 3794 dgault 'Chunk API: Add new API and functionality for reading and writing chunks' (label: exclude)
  - PR 3680 iwbh15 'Performance increase in writeIFD' (user: iwbh15)
  - PR 3618 dgault 'Memoizer: Persist caching to sub readers' (label: breaking)
  - PR 3537 dgault 'Flex: Merge IDR changes and add new group plate option' (label: exclude)
Already up to date.

Merged PRs:
  - PR 4130 carandraug 'matlab/bfGetPlane.m: avoid use of makeDataArray2D when Octave (ome/bio-formats-octave-docker#29)'
  - PR 4188 melissalinkert 'Fix a few string comparisons, fixes #4184'

Repository: ome/ome-codecs
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Merged PRs:
  - PR 37 melissalinkert 'JPEG: warn if quality is outside [0.25, 1.0]'

Repository: ome/ome-common-java
Excluded PRs:
  - PR 59 NicoKiaru 'adds AverageImageScaler implementation of IImageScaler' (user: NicoKiaru)
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Repository: ome/ome-jai
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Repository: ome/ome-mdbtools
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Repository: ome/ome-metakit
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Repository: ome/ome-model
Excluded PRs:
  - PR 180 joshmoore 'xsd-fu: templates for linkml generation' (stage: draft)
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Conflicting PRs (not included):
  - PR 174 jburel 'Remove docs'

Repository: ome/ome-poi
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Repository: ome/ome-stubs
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Generated by BIOFORMATS-push#73 (https://merge-ci.openmicroscopy.org/jenkins/job/BIOFORMATS-push/73/)
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snoopycrimecop committed May 18, 2024
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48 changes: 24 additions & 24 deletions .gitmodules
Original file line number Diff line number Diff line change
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[submodule "ome-common-java"]
path = ome-common-java
url = https://github.com/ome/ome-common-java.git
branch = master
url = https://github.com/snoopycrimecop/ome-common-java.git
branch = merge_ci
[submodule "ome-model"]
path = ome-model
url = https://github.com/ome/ome-model.git
branch = master
url = https://github.com/snoopycrimecop/ome-model.git
branch = merge_ci
[submodule "ome-poi"]
path = ome-poi
url = https://github.com/ome/ome-poi.git
branch = master
url = https://github.com/snoopycrimecop/ome-poi.git
branch = merge_ci
[submodule "ome-mdbtools"]
path = ome-mdbtools
url = https://github.com/ome/ome-mdbtools.git
branch = master
url = https://github.com/snoopycrimecop/ome-mdbtools.git
branch = merge_ci
[submodule "ome-jai"]
path = ome-jai
url = https://github.com/ome/ome-jai.git
branch = master
url = https://github.com/snoopycrimecop/ome-jai.git
branch = merge_ci
[submodule "ome-codecs"]
path = ome-codecs
url = https://github.com/ome/ome-codecs.git
branch = master
url = https://github.com/snoopycrimecop/ome-codecs.git
branch = merge_ci
[submodule "ome-metakit"]
path = ome-metakit
url = https://github.com/ome/ome-metakit.git
branch = master
url = https://github.com/snoopycrimecop/ome-metakit.git
branch = merge_ci
[submodule "ome-stubs"]
path = ome-stubs
url = https://github.com/ome/ome-stubs.git
branch = master
url = https://github.com/snoopycrimecop/ome-stubs.git
branch = merge_ci
[submodule "bioformats"]
path = bioformats
url = https://github.com/openmicroscopy/bioformats.git
branch = develop
url = https://github.com/snoopycrimecop/bioformats.git
branch = merge_ci
[submodule "bio-formats-documentation"]
path = bio-formats-documentation
url = https://github.com/ome/bio-formats-documentation.git
branch = master
url = https://github.com/snoopycrimecop/bio-formats-documentation.git
branch = merge_ci
[submodule "bio-formats-examples"]
path = bio-formats-examples
url = https://github.com/ome/bio-formats-examples.git
branch = master
url = https://github.com/snoopycrimecop/bio-formats-examples.git
branch = merge_ci
[submodule "ZarrReader"]
path = ZarrReader
url = https://github.com/ome/ZarrReader.git
branch = main
url = https://github.com/snoopycrimecop/ZarrReader.git
branch = merge_ci
2 changes: 1 addition & 1 deletion bio-formats-documentation
2 changes: 1 addition & 1 deletion ome-codecs
2 changes: 1 addition & 1 deletion ome-common-java
Submodule ome-common-java updated 0 files
2 changes: 1 addition & 1 deletion ome-jai
Submodule ome-jai updated 0 files
2 changes: 1 addition & 1 deletion ome-mdbtools
Submodule ome-mdbtools updated 0 files
2 changes: 1 addition & 1 deletion ome-metakit
Submodule ome-metakit updated 0 files
2 changes: 1 addition & 1 deletion ome-model
Submodule ome-model updated 0 files
2 changes: 1 addition & 1 deletion ome-poi
Submodule ome-poi updated 0 files
2 changes: 1 addition & 1 deletion ome-stubs
Submodule ome-stubs updated 0 files

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