Add vagrant.

Add a directory contrib/vagrant/ to help creating a vagrant VM.

Add cmake to contrib/conda.sh.

Allow contrib/devenv/create.sh to take an argument.

.travis.yml

@@ -65,13 +65,13 @@ script:
   # C++ debug build
   - mkdir -p ${TRAVIS_BUILD_DIR}/build/debug
   - cd ${TRAVIS_BUILD_DIR}/build/debug
-  - cmake -DTESTFILTER="*" -DCMAKE_BUILD_TYPE=Debug -DPYTHON_EXECUTABLE=`which python` ${TRAVIS_BUILD_DIR}
+  - cmake -DTESTFILTER="*" -DCMAKE_BUILD_TYPE=Debug ${TRAVIS_BUILD_DIR}
   - cd ${TRAVIS_BUILD_DIR}
   - make -C build/debug run_gtest
   # C++ release build
   - mkdir -p ${TRAVIS_BUILD_DIR}/build/release
   - cd ${TRAVIS_BUILD_DIR}/build/release
-  - cmake -DTESTFILTER="*" -DCMAKE_BUILD_TYPE=Release -DPYTHON_EXECUTABLE=`which python` ${TRAVIS_BUILD_DIR}
+  - cmake -DTESTFILTER="*" -DCMAKE_BUILD_TYPE=Release ${TRAVIS_BUILD_DIR}
   - cd ${TRAVIS_BUILD_DIR}
   - make -C build/release run_gtest
   # Build Python extension

contrib/conda.sh

@@ -1,6 +1,6 @@
 #!/bin/bash
 conda install -y \
-  six setuptools pip sphinx ipython jupyter \
+  cmake six setuptools pip sphinx ipython jupyter \
   cython numpy netcdf4 nose paramiko boto graphviz
 lret=$?; if [[ $lret != 0 ]] ; then exit $lret; fi
 conda install -y -c https://conda.anaconda.org/yungyuc \

contrib/devenv/create.sh

@@ -1,6 +1,12 @@
 #!/bin/bash
-SCDEV_SRC="$( cd "$( dirname "${BASH_SOURCE[0]}" )" && pwd )"
-SCDEV_ROOT=${SCDEV_SRC}/../../build/env
-mkdir -p ${SCDEV_ROOT}
-conda create -p ${SCDEV_ROOT}/install --no-default-packages -y python
-cp -f ${SCDEV_SRC}/start ${SCDEV_ROOT}/start
+SCDEVENV_SRC="$( cd "$( dirname "${BASH_SOURCE[0]}" )" && pwd )"
+if [ -z "$1" ]; then
+  SCDEVENV_DST=env
+else
+  SCDEVENV_DST=$1
+fi
+SCDEVENV_DST=${SCDEVENV_SRC}/../../build/${SCDEVENV_DST}
+echo "Create environment at ${SCDEVENV_DST}"
+mkdir -p ${SCDEVENV_DST}
+conda create -p ${SCDEVENV_DST}/install --no-default-packages -y python
+cp -f ${SCDEVENV_SRC}/start ${SCDEVENV_DST}/start

contrib/devenv/start

@@ -1,5 +1,5 @@
-export SCDEV_ROOT="$( cd "$( dirname "${BASH_SOURCE[0]}" )" && pwd )"
-export SCSRC="$( cd ${SCDEV_ROOT}/../.. && pwd )"
+export SCDEVENV="$( cd "$( dirname "${BASH_SOURCE[0]}" )" && pwd )"
+export SCSRC="$( cd ${SCDEVENV}/../.. && pwd )"
 namemunge () {
   if ! echo ${!1} | egrep -q "(^|:)$2($|:)" ; then
     if [ -z "${!1}" ] ; then
@@ -21,5 +21,5 @@ namemunge () {
 #fi
 namemunge PATH $SCSRC
 namemunge PYTHONPATH $SCSRC
-source activate ${SCDEV_ROOT}/install
+source activate ${SCDEVENV}/install
 # vim: set ff=unix fenc=utf8 nobomb ft=sh:

contrib/vagrant/.gitignore

@@ -0,0 +1 @@
+.vagrant/

contrib/vagrant/Vagrantfile

@@ -0,0 +1,33 @@
+# -*- mode: ruby -*-
+# vi: set ft=ruby :
+
+Vagrant.configure("2") do |config|
+  config.vm.box = "ubuntu/trusty64"
+
+  config.ssh.forward_agent = true
+
+  config.vm.provider "virtualbox" do |vb|
+    vb.name = "solvcon_trusty64"
+    vb.memory = "2048"
+    if ENV["SC_VIRTUALBOX_DESKTOP"]
+      vb.gui = true
+      vb.customize ["modifyvm", :id, "--vram", "16"]
+      vb.customize ["modifyvm", :id, "--accelerate3d", "on"]
+      vb.customize ["modifyvm", :id, "--clipboard", "bidirectional"]
+    else
+      vb.gui = false
+    end
+  end
+
+  # expose for jupyter notebook
+  config.vm.network "forwarded_port", guest: 8888, host: 8888, host_ip: 'localhost', protocol: 'tcp', auto_correct: true
+
+  config.vm.provision :shell, path: "bootstrap.sh"
+  config.vm.provision :shell, path: "bootstrap-anaconda.sh", privileged: false
+  config.vm.provision :shell, path: "setup-dotfiles.sh", privileged: false
+  if ENV["SC_VIRTUALBOX_DESKTOP"]
+    config.vm.provision :shell, path: "bootstrap-desktop.sh"
+    config.vm.provision :shell, path: "setup-launcher.sh", privileged: false
+  end
+
+end

contrib/vagrant/bootstrap-anaconda.sh

@@ -0,0 +1,22 @@
+#!/bin/bash
+
+mkdir -p ${HOME}/tmp/miniconda
+cd ${HOME}/tmp/miniconda
+
+miniconda3=Miniconda3-latest-Linux-x86_64.sh
+if [[ ! -f $miniconda3 ]]; then
+  echo "Download from http://repo.continuum.io/miniconda/$miniconda3"
+  wget --quiet http://repo.continuum.io/miniconda/$miniconda3
+  if [[ `which conda` != "${HOME}/opt/miniconda3/bin/conda" ]]; then
+    bash $miniconda3 -b -p ${HOME}/opt/miniconda3
+  fi
+fi
+
+miniconda2=Miniconda2-latest-Linux-x86_64.sh
+if [[ ! -f $miniconda2 ]]; then
+  echo "Download from http://repo.continuum.io/miniconda/$miniconda2"
+  wget --quiet http://repo.continuum.io/miniconda/$miniconda2
+  if [[ `which conda` != "${HOME}/opt/miniconda2/bin/conda" ]]; then
+    bash $miniconda2 -b -p ${HOME}/opt/miniconda2
+  fi
+fi

contrib/vagrant/bootstrap-desktop.sh

@@ -0,0 +1,11 @@
+#!/bin/bash
+
+# NOTE: linux-generic contains drm kernel module, which is required for
+# vboxvideo kernel module.  Without vboxvideo Ubuntu unity graphics will be
+# extremely slow.  See
+# http://askubuntu.com/questions/287532/how-do-i-resolve-slow-and-choppy-performance-in-virtualbox.
+# "/usr/lib/nux/unity_support_test -p" is a convenient tool to check Ubuntu's
+# video acceleration status.
+apt-get install -y \
+  ubuntu-desktop linux-generic \
+  virtualbox-guest-dkms virtualbox-guest-utils virtualbox-guest-x11 \

contrib/vagrant/bootstrap.sh

@@ -0,0 +1,14 @@
+#!/bin/bash
+
+sudo timedatectl set-timezone Asia/Taipei
+
+# Update repository.
+apt-get update
+
+# Make the system up-to-date.
+apt-get dist-upgrade -y
+
+# For development environment.
+apt-get install -y \
+  build-essential liblapack-pic liblapack-dev \
+  git mercurial vim exuberant-ctags cscope

contrib/vagrant/dotfiles/dot_bashrc

@@ -0,0 +1,73 @@
+umask 002
+
+#[ -z "$PS1" ] && return
+
+# don't put duplicate lines in the history. See bash(1) for more options
+export HISTCONTROL=ignoredups
+# check the window size after each command and, if necessary,
+# update the values of LINES and COLUMNS.
+shopt -s checkwinsize
+# set a fancy prompt (non-color, unless we know we "want" color)
+PS1='\u@\h[\!]:\w$(__git_ps1 "(%s)")\n\$ '
+# locale.
+export LANG=en_US.UTF-8
+export LANGUAGE=en_US.UTF-8
+export LC_ALL=en_US.UTF-8
+# make less more friendly for non-text input files, see lesspipe(1)
+[ -x /usr/bin/lesspipe ] && eval "$(lesspipe)"
+# set default editor.
+export EDITOR=vim
+
+# determine ls color.
+ARCH=`uname`
+if [ "$TERM" != "dumb" ]; then
+  if [ $ARCH == "Linux" ]; then
+    if [ -f ~/.dir_colors ]; then
+      eval "`dircolors -b ~/.dir_colors`"
+    else
+      eval "`dircolors -b`"
+    fi
+  elif [ $ARCH == "FreeBSD" ]; then
+    export LSCOLORS="Exfxcxdxbxegedabagacad"
+  elif [ $ARCH == "Darwin" ]; then
+    export CLICOLOR=1
+    export LSCOLORS="Exfxcxdxbxegedabagacad"
+  fi
+fi
+
+. ~/.git-completion.bash
+. ~/.git-prompt.bash
+
+namemunge () {
+  if ! echo ${!1} | egrep -q "(^|:)$2($|:)" ; then
+    if [ -z "${!1}" ] ; then
+      eval "$1=$2"
+    else
+      if [ "$3" == "after" ] ; then
+        eval "$1=\$$1:$2"
+      else
+        eval "$1=$2:\$$1"
+      fi
+    fi
+  fi
+  eval "export $1"
+}
+
+alias j=jobs
+alias h=history
+
+alias quota='quota -s'
+alias ls='ls -F --color=auto'
+alias ll='ls -l'
+alias lla='ll -a'
+alias dfh='df -h'
+alias s='screen -r'
+alias sc=screen
+alias vi=vim
+
+alias use.conda2="namemunge PATH ${HOME}/opt/miniconda2/bin"
+alias use.conda3="namemunge PATH ${HOME}/opt/miniconda3/bin"
+
+if [ -d "${HOME}/opt/miniconda3/bin" ]; then use.conda3; fi
+
+# vim: sw=2 ts=2 tw=76 et nu ft=sh:

contrib/vagrant/dotfiles/dot_dir_colors

@@ -0,0 +1,146 @@
+# Configuration file for dircolors, a utility to help you set the
+# LS_COLORS environment variable used by GNU ls with the --color option.
+# The keywords COLOR, OPTIONS, and EIGHTBIT (honored by the
+# slackware version of dircolors) are recognized but ignored.
+# Below, there should be one TERM entry for each termtype that is colorizable
+TERM linux
+TERM linux-c
+TERM mach-color
+TERM console
+TERM con132x25
+TERM con132x30
+TERM con132x43
+TERM con132x60
+TERM con80x25
+TERM con80x28
+TERM con80x30
+TERM con80x43
+TERM con80x50
+TERM con80x60
+TERM cygwin
+TERM dtterm
+TERM mlterm
+TERM putty
+TERM xterm
+TERM xterm-color
+TERM xterm-debian
+TERM rxvt
+TERM rxvt-unicode
+TERM screen
+TERM screen-bce
+TERM screen-w
+TERM vt100
+TERM Eterm
+# Below are the color init strings for the basic file types. A color init
+# string consists of one or more of the following numeric codes:
+# Attribute codes:
+# 00=none 01=bold 04=underscore 05=blink 07=reverse 08=concealed
+# Text color codes:
+# 30=black 31=red 32=green 33=yellow 34=blue 35=magenta 36=cyan 37=white
+# Background color codes:
+# 40=black 41=red 42=green 43=yellow 44=blue 45=magenta 46=cyan 47=white
+NORMAL 00 # global default, although everything should be something.
+FILE 00 # normal file
+DIR 00;36 # directory
+LINK 01;36 # symbolic link. (If you set this to 'target' instead of a
+ # numerical value, the color is as for the file pointed to.)
+FIFO 40;33 # pipe
+SOCK 01;35 # socket
+DOOR 01;35 # door
+BLK 40;33;01 # block device driver
+CHR 40;33;01 # character device driver
+ORPHAN 40;31;01 # symlink to nonexistent file
+#SETUID 37;41 # file that is setuid (u+s)
+#SETGID 30;43 # file that is setgid (g+s)
+#STICKY_OTHER_WRITABLE 30;42 # dir that is sticky and other-writable (+t,o+w)
+#OTHER_WRITABLE 34;42 # dir that is other-writable (o+w) and not sticky
+#STICKY 37;44 # dir with the sticky bit set (+t) and not other-writable
+# This is for files with execute permission:
+EXEC 01;32
+# List any file extensions like '.gz' or '.tar' that you would like ls
+# to colorize below. Put the extension, a space, and the color init string.
+# (and any comments you want to add after a '#')
+# If you use DOS-style suffixes, you may want to uncomment the following:
+#.cmd 01;32 # executables (bright green)
+#.exe 01;32
+#.com 01;32
+#.btm 01;32
+#.bat 01;32
+# archives or compressed (bright red)
+.tar 01;31
+.tgz 01;31
+.arj 01;31
+.taz 01;31
+.lzh 01;31
+.zip 01;31
+.z 01;31
+.Z 01;31
+.gz 01;31
+.bz2 01;31
+.deb 01;31
+.rpm 01;31
+.jar 01;31
+.rar 01;31
+# document formats (yellow)
+.rtf 01;33
+.doc 01;33
+.docx 01;33
+.xls 01;33
+.xlsx 01;33
+.ppt 01;33
+.pptx 01;33
+.tex 01;33
+.txt 01;33
+.rst 01;33
+# compiled documents (blue)
+.dvi 01;34
+.ps 01;34
+.pdf 01;34
+# source formats (yellow)
+.c 01;33
+.cpp 01;33
+.f 01;33
+.F 01;33
+.f90 01;33
+.F90 01;33
+.py 01;33
+.cu 01;33
+# image formats (magenta)
+.jpg 01;35
+.jpeg 01;35
+.gif 01;35
+.bmp 01;35
+.pbm 01;35
+.pgm 01;35
+.ppm 01;35
+.tga 01;35
+.xbm 01;35
+.xpm 01;35
+.tif 01;35
+.tiff 01;35
+.png 01;35
+.eps 01;35
+.gl 01;35
+.dl 01;35
+.xcf 01;35
+.xwd 01;35
+# video format (magenta)
+.mov 01;31
+.mpg 01;31
+.mpeg 01;31
+.avi 01;31
+.wmv 01;31
+.fli 01;31
+.rm 01;31
+.rmvb 01;31
+.mkv 01;31
+.ts 01;31
+.mp4 01:31
+# audio formats
+.flac 01;34
+.ape 01;34
+.mp3 01;34
+.mpc 01;34
+.ogg 01;34
+.wav 01;34
+.wma 01;34