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Sourmash panicked when it "Couldn't find End Of Central Directory Record" #3190
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ah-hah! I am virtually positive that the error is from zip itself, so It may also be that I'll have to think about ways to track this down and/or better handle this kind of error. Thanks for reporting! |
The final command I listed worked like a charm. Took some time to run through all 700 files, but I was easily able to find the culprit by searching the log file created. While each of the commands @ctb listed return a similar error,
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OK, so this error is triggered by faulty zip files. Maybe we should be returning a better error when the zip file is faulty 🤔 |
punting to #3213 |
The command
While building the AllTheBacteria sourmash DB, I am using:
The error
The error produced:
The investigation
I seen two possible errors immediately:
Due to the random order when using the
find
command I do not know which file the error occurred on. Therefore, I have run two separate attempts to find a signature that replicates the error above:I am currently running this command to investigate further:
I am also attempting to
sig cat
only one k size at a time instead of all three. In case it is a working memory error.The text was updated successfully, but these errors were encountered: