This project was in collaboration with *Ms. A Agrawal, University of Connecticut, Special Program in Medicine (BS/MD), Experiential Learning Program Project: "Identifying biomarkers between lymphoma and leukemia cancer patients" (Fall 2021). CT STEM and Norwalk Science Fair (Poster Presentation). Date created/updated: December, 9, 2024. [R: Affy, Limma]. (May 1, 2024- August 31, 2024). Award (Start date- End date). Title III and Special Initiative Office SEED Funding, Claflin University, Orangeburg, South Carolina, USA: "Biomarker Identification for the Diagnosis of Chronic Lymphocytic Leukemia (CLL)" (2024): Total Award (Direct and indirect costs) $8,840.00 Github Students involved **Lierra Rivera π​++.Presently doctoral student at Clemson University, Bioengineering Program School of Computing, Biomedical Data Science & Informatics, **Germari Cull π​++., **Mr. †Adrian Lockwood, Student Graduations: https://shorturl.at/jAmLF †: The Alice Carson Tisdale Honors College/Center at Claflin University. Student Mentoring and Research Training program (SMaRT) Intern, University of Tennessee-Oak Ridge Innovation Institute, Presently Internship at Oak Ridge National Laboratory, Tennessee, United States. https://www.ornl.gov/ https://utorii.com/smart-internships/ https://www.claflin.edu/academics-research/special-programs-and-opportunities/honors-college (National Institute of Health (NIH) Undergraduate Research Training Initiative for Student Enhancement (U-RISE), Biomedical Research Summer Internship Program (BR-SIP) mentor π​++.), and ***Kalyn Wesby. Role: PI, (Direct costs, Effort=100%). π​++. Co-PI/co-PI (Principal Investigator). https://www.claflin.edu/ https://github.com/WKalynn Graduate Student, Claflin University, Orangeburg, South Carolina, United States of America (USA). †: The Alice Carson Tisdale Honors College/Center at Claflin University. Student Graduations: https://shorturl.at/jAmLF https://www.claflin.edu/academics-research/special-programs-and-opportunities/honors-college https://github.com/lerivera27 https://github.com/AdrianL769 https://github.com/germari https://www.claflin.edu/ https://www.claflin.edu/academics-research/schools-departments/school-of-natural-sciences-and-mathematics/department-of-mathematics-computer-science/computer-science https://www.linkedin.com/in/leiara-rivera-3a3069233 https://www.linkedin.com/in/adrian-lockwood-703244109 https://www.linkedin.com/in/germari-cull-a9b980264 Presentation Video PPT: https://campuspress.yale.edu/shrikantpawar/files/2025/03/Adrian-M.-Lockwood.pptx https://github.com/spawar2/Prostrate-Cancer-Biomarker-Analysis/tree/main https://campuspress.yale.edu/shrikantpawar/files/2025/03/Adrian-Lockwood-300x224.png https://campuspress.yale.edu/shrikantpawar/files/2025/04/Kalyn-Wesby.pptx https://github.com/spawar2/Prostrate-Cancer-Biomarker-Analysis/tree/main Blood-Cancer-Analysis.R: Multiple myeloma Microarray data read, robust multi array (RMA) Normalization, Fold change analysis. selected function(getGEO, normalize.quantiles, merge, cluster_analysis, hclust, Kmeans, mas5, rowMeans, randomForest, survfit, chisq.test, pData, rep, colnames, factor, eBayes, decideTests, topTable, read.tree, plot, str, write.tree, library, setwd, ReadAffy, exprs, read.csv, read.delim, write.table, roundPhylogram, unroot, str, write.tree, RMA, read.table, BGmix, ccParams, TailPP, ccTrace, histTailPP, FDRplotTailPP, histccPred, plotFDR, plotPredChecks, exprSet).

Programming language: + Python. π: Classes taught: CSCI/HNTH391/392 (https://pawar1550.wixsite.com/claflin-courses/copy-of-csci-hnth-391-1).

https://www.java.com/ https://www.php.net/ https://www.mysql.com/ https://www.mathworks.com/products/matlab.html

https://www.r-project.org/ https://www.bioconductor.org/packages/3.21/BiocViews.html#___Software https://bioconductor.org/packages/release/bioc/html/GenomicFeatures.html https://bioconductor.org/packages/release/bioc/html/clusterProfiler.html https://www.bioconductor.org/packages/release/bioc/html/enrichplot.html https://ggplot2.tidyverse.org/ https://cran.r-project.org/package=randomForest https://topepo.github.io/caret/ https://bioconductor.org/packages/release/bioc/html/DESeq2.html https://cran.r-project.org/package=missForest https://bioconductor.org/packages/release/bioc/html/affy.html https://bioconductor.org/packages/release/bioc/html/limma.html https://rstudio.github.io/DT/ https://bioconductor.org/packages/release/bioc/html/edgeR.html https://apps.cytoscape.org/apps/cytohubba https://cytoscape.org/ https://string-db.org/ https://www.gsea-msigdb.org/ https://bioconductor.org/packages//2.13/bioc/html/BGmix.html https://ggplot2.tidyverse.org/ https://www.htmlwidgets.org/ https://cran.r-project.org/package=cluster https://cran.r-project.org/package=fpc https://cran.r-project.org/package=survival https://www.bioconductor.org/packages/release/bioc/html/multiClust.html https://www.bioconductor.org/packages/release/bioc/html/GEOquery.html https://cran.r-project.org/package=dendextend https://cran.r-project.org/package=amap https://www.bioconductor.org/packages/release/bioc/html/preprocessCore.html https://www.bioconductor.org/packages/3.21/BiocViews.html#___Software https://shiny.posit.co/ https://cran.r-project.org/package=ggbeeswarm https://cran.r-project.org/package=speedglm https://magrittr.tidyverse.org/

https://www.python.org/ https://scikit-learn.org/ https://pandas.pydata.org/ https://matplotlib.org/ https://www.tidyverse.org/ https://numpy.org/ https://www.tensorflow.org/ https://kivy.org/ https://pydicom.github.io/ https://docs.python.org/3/library/shlex.html https://scipy.org/ https://scikit-image.org/ https://seaborn.pydata.org/ https://librosa.org/doc/ https://docs.python.org/3/library/glob.html https://pytorch.org/ https://pydicom.github.io/ https://biopython.org/docs/dev/api/Bio.Blast.html https://pypi.org/project/openai/0.26.5/ https://docs.python.org/3/library/tkinter.html https://docs.fast.ai/ https://pypi.org/project/torchvision/