viewer syntax at the end does not provide correct output file name

[jcohenadad]

while working on #4477 I noticed that the output syntax of sct_apply_transfo is missing the output file name:

julien-macbook:~/temp/Lydia/results_20240430_225215/data_processed/sub-BB277/anat $ sct_apply_transfo -i sub-BB277_T2_straight.nii.gz -d sub-BB277_T2.nii.gz -w warp_straight2curve.nii.gz 

--
Spinal Cord Toolbox (git-master-4e3b9ebbbd6672169a8bdfd9c5fde4b81716eaa7)

sct_apply_transfo -i sub-BB277_T2_straight.nii.gz -d sub-BB277_T2.nii.gz -w warp_straight2curve.nii.gz
--


Parse list of warping fields...

Get dimensions of data...
  63 x 89 x 318 x 1

Apply transformation...

Apply transformation and resample to destination space...
/Users/julien/code/spinalcordtoolbox/bin/isct_antsApplyTransforms -d 3 -i sub-BB277_T2_straight.nii.gz -o sub-BB277_T2_straight_reg.nii.gz -t warp_straight2curve.nii.gz -r sub-BB277_T2.nii.gz -n 'BSpline[3]' # in /Users/julien/temp/Lydia/results_20240430_225215/data_processed/sub-BB277/anat
Copy affine matrix from destination space to make sure qform/sform are the same.

Done! To view results, type:
fsleyes sub-BB277_T2.nii.gz . &

Notice the last line. I would expect to see this instead:

fsleyes sub-BB277_T2.nii.gz sub-BB277_T2_straight_reg.nii.gz &

[joshuacwnewton]

Thanks for catching this! I'll fix this ASAP.