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Clarified documentation #2650

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merged 1 commit into from Mar 31, 2020
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Clarified documentation #2650

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10 changes: 9 additions & 1 deletion scripts/sct_dmri_concat_b0_and_dwi.py
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Expand Up @@ -24,7 +24,15 @@

def get_parser():
parser = argparse.ArgumentParser(
description="Concatenate b=0 scans with DWI time series and update the bvecs and bvals files.",
description="Concatenate b=0 scans with DWI time series and update the bvecs and bvals files.\n\n"
"Example 1: Add two b=0 file at the beginning and one at the end of the DWI time series:\n"
">> sct_dmri_concat_b0_and_dwi -i b0-1.nii b0-2.nii dmri.nii b0-65.nii -bvec bvecs.txt -bval "
"bvals.txt -order b0 b0 dwi b0 -o dmri_concat.nii -obval bvals_concat.txt -obvec "
"bvecs_concat.txt\n\n"
"Example 2: Concatenate two DWI series and add one b=0 file at the beginning:\n"
">> sct_dmri_concat_b0_and_dwi -i b0-1.nii dmri1.nii dmri2.nii -bvec bvecs1.txt bvecs2.txt -bval "
"bvals1.txt bvals2.txt -order b0 dwi dwi -o dmri_concat.nii -obval bvals_concat.txt -obvec "
"bvecs_concat.txt",
formatter_class=SmartFormatter,
add_help=None,
prog=os.path.basename(__file__).strip(".py")
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