Epigenetic variation of two populations grown at common site
In a different experiment compared to when Fidalgo siblings were outplanted at two sites, we also examined Hood Canal (HC) and Oyster Bay (SS/South Sound) grown at Clam Bay (Manchester). Descriptor.
These were the oysters Katherine Silliman spawned in the summer of 2015 and represent seed Jake outplanted years ago.
This was run against the BGI scaffolds >10k.
The results are quite interesting.
The full notebook can be found at https://github.com/sr320/nb-2016/blob/master/O_lurida/BSMAP-06-BGIv001.ipynb.