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ssbio/README.md

Welcome to the GitHub page for the Systems and Synthetic Biology group at the University of Nebraska - Lincoln!

Found here are the codes, input files, supplemental files, etc. related to our various published works.

Questions can be addressed to: PI: Dr. Rajib Saha email: rsaha2@unl.edu

Popular repositories

  1. iSA863 iSA863 Public

    Genome-scale metabolic model of Staphylococcus aureus USA300_FPR3757 (iSA863): GAMS simulation files

    GAMS 1

  2. GAMS_scripts GAMS_scripts Public

  3. models models Public

  4. E_dermatitidis_model E_dermatitidis_model Public

    Model files and codes which were used in the building of a genome-scale model of Exophiala dermatitidis called iEde2091

    GAMS 1

  5. OptFill OptFill Public

    Code related to the implementation of OptFill

    GAMS 1

  6. p-ath773 p-ath773 Public

    Files required for the p-ath773 model demonstrating the ORKA method

    GAMS