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tag v0.2.0

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@standage standage released this 19 Jan 06:11
· 61 commits to master since this release

Added

  • An index class for efficient in-memory access of sequence features.
  • Module for mRNA handling, with a function for selecting the primary mRNA from
    a gene or other feature.
  • New CLI command tag pmrna.
  • A new Score class for internal handling of feature scores. Not yet included
    in the API, and may not ever be.

Changed

  • Modules focused on classes / data structure now support more concise imports
    (for example, from tag import Feature and tag.Feature now supported and
    preferred over from tag.feature import feature and tag.feature.Feature).

Fixed

  • Resolved a bug with the GFF3Writer failing to print ##FASTA directives
    before writing sequences to output.