intro.ipynb notebook not running first cell on CPU environment: missing modules

[jramirezpr]

If you try to run the first cell, you get as the end of the trace the error:
modulenotfounderror: No module named 'git'
I fixed it with

pip install GitPython

then you get an error about missing transformers so ran this

 pip install transformers[torch]

then it runs fine.
these two packages should be added to the CPU environment yaml file, or added to the README.md as part of the install instructions.

[okhat]

Please don't install with pip. Follow the conda instructions in the README. Does that fix the issue?

[jramirezpr]

I did not install ColBERT with pip, I created the environment using the CPU .yml with conda. The pip is for resolving the issues about the two missing packages.

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________________________________ De: Omar Khattab ***@***.***> Enviado: lunes, 12 de diciembre de 2022 12:37 p. m. Para: stanford-futuredata/ColBERT ***@***.***> CC: Juan Carlos Ramirez ***@***.***>; Author ***@***.***> Asunto: Re: [stanford-futuredata/ColBERT] intro.ipynb notebook not running first cell on CPU environment: missing modules (Issue #146) Please don't install with pip. Follow the conda instructions in the README. Does that fix the issue? — Reply to this email directly, view it on GitHub<#146 (comment)>, or unsubscribe<https://github.com/notifications/unsubscribe-auth/AGDJUUVJ6PFFT5NLTLBGSRDWM6EJ7ANCNFSM6AAAAAASPBCSQY>. You are receiving this because you authored the thread.Message ID: ***@***.***>

[okhat]

Hmm are you sure the conda env you created is being used in jupyter then? This error seems like it's not aware of the conda stuff.

[jramirezpr]

I think that solved it. I just deleted it and recreated it, then ran conda install -c anaconda jupyter, and now it is working. It is most likely that I was using another environment's jupyter like you mentioned (makes sense, since the environment created with the .yml didn't have jupyter as dependency, usually I install jupyter on Anaconda UI homepage but cannot recall doing so)

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________________________________ De: Omar Khattab ***@***.***> Enviado: martes, 10 de enero de 2023 11:26 a. m. Para: stanford-futuredata/ColBERT ***@***.***> CC: Juan Carlos Ramirez ***@***.***>; Author ***@***.***> Asunto: Re: [stanford-futuredata/ColBERT] intro.ipynb notebook not running first cell on CPU environment: missing modules (Issue #146) Hmm are you sure the conda env you created is being used in jupyter then? This error seems like it's not aware of the conda stuff. — Reply to this email directly, view it on GitHub<#146 (comment)>, or unsubscribe<https://github.com/notifications/unsubscribe-auth/AGDJUURRBAOAXCOFECQH2LTWRWZXNANCNFSM6AAAAAASPBCSQY>. You are receiving this because you authored the thread.Message ID: ***@***.***>

[okhat]

Awesome! Feel free to close or re-open as needed