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TypeError: execfile() argument 1 must be string, not None #18

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nbbarrientos opened this issue Nov 6, 2023 · 1 comment
Open

TypeError: execfile() argument 1 must be string, not None #18

nbbarrientos opened this issue Nov 6, 2023 · 1 comment

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@nbbarrientos
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Hello, I was trying to plot a quick locuszoom plot using some GWAS data and user-provided LD data (formatted per instructions) and when I run the command:

../locuszoom/bin/locuszoom --metal metal_file.txt --refgene GBA --ld my_ld.txt

I get the following errors:

Traceback (most recent call last):
File "../LocusZoom/locuszoom/bin/locuszoom", line 28, in
main();
File "/data/amccall2/work/NBB/LocusZoom/locuszoom/bin/../src/m2zfast.py", line 2102, in main
conf = getConf()
File "/data/amccall2/work/NBB/LocusZoom/locuszoom/bin/../src/m2zfast.py", line 130, in getConf
conf = Conf(conf_file)
File "/data/amccall2/work/NBB/LocusZoom/locuszoom/bin/../src/m2zfast.py", line 119, in init
self._load(conf_file)
File "/data/amccall2/work/NBB/LocusZoom/locuszoom/bin/../src/m2zfast.py", line 123, in _load
execfile(file,conf_dict)
TypeError: execfile() argument 1 must be string, not None

@dralhindi
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I keep getting this error too. Did you find a solution elsewhere?

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