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358134681255936000 Jul 19 04:02 @robinhaw @ThomasKelder is trying to identify anti-diabetic interventions using functional interaction networks #netbiosig #ismbeccb
358134689640775680 Jul 19 04:02 @Chris_Evelo My former PhD student Thomas Kelder, now at TNO: finding the most relevant genes is like finding the nicest pebbles on a beach #ismbeccb
358134924617850880 Jul 19 04:03 @manuelcorpas Nice to see @StacySlagor at #GOBLET meeting #ISMBECCB
358135363996368896 Jul 19 04:04 @laxvid #HiTSEQ2013 #ISMBECCB Inanc Birol: Assembling the 20 Gb White Spruce Genome.
358135390370136064 Jul 19 04:05 @Chris_Evelo TK there is direction in gene network from intervention through progression to disease parameters. #ismbeccb #nbsig
358135723402465280 Jul 19 04:06 @DNADigest RT @luispedrocoelho: "nobody ever got a Nobel Prize for building great infrastructure" @CameronNeylon #ismbeccb #BOSC2013
358135738052771841 Jul 19 04:06 @Chris_Evelo TK progression related genes should cluster (eg in expression) and correlate with disease progression. #ismbeccb #nbsig
358135780218511360 Jul 19 04:06 @pjacock #ISMBECCB RT @danmaclean: The great thing about this conference is I'm I'm SNPsig, but many tweeps in other sessions. #Twoplacesatonce
358135865690058752 Jul 19 04:06 @DNADigest RT @bffo: Cameron Neylon on Network Ready Research t, the role for open source & open thinking http://cameronneylon.net/ #ismbeccb #BOSC2013
358136099983466496 Jul 19 04:07 @laxvid @IB: #ISMBECCB hacked miSeq to modify reaction cartrdige to do 2X300bp :-)
358136288118980608 Jul 19 04:08 @Chris_Evelo TK once upstream regulatory gene modules leading to disease progression you can hunt for interventions. #ismbeccb #nbsig
358136330728902656 Jul 19 04:08 @luispedrocoelho "It's the potential for commercial opportunities which pushes politicians to like openness in research" (!) #ismbeccb #BOSC2013
358136710128877570 Jul 19 04:10 @Chris_Evelo Since resulting disease regulatory network clusters are big TK used random walk algorithm between intervention & disease #ismbeccb #nbsig
358136896368553984 Jul 19 04:11 @luispedrocoelho "You don't evaluate software quality by the impact factor of the journal it is published in" @CameronNeylon #ismbeccb #BOSC2013
358136964412751872 Jul 19 04:11 @nskunca Call for action form Alex Bateman to edit Wikipedia: we get so much from it, it is time to give back. Join ISCB Wiki competition #ismbeccb
358137014509916160 Jul 19 04:11 @Chris_Evelo In the end TK's approach leads to a method to selected effective interventions preventing disease #nbsig #ismbeccb
358137035338821632 Jul 19 04:11 @bffo RT @luispedrocoelho: "It's the potential for commercial opportunities which pushes politicians to like openness in research" (!) #ismbeccb #BOSC2013
358137085078683648 Jul 19 04:11 @luispedrocoelho "We have unit tests in the wet lab, we call them controls" @CameronNeylon #ismbeccb #BOSC2013
358137159837949952 Jul 19 04:12 @GigaScience .@CameronNeylon "peer review of software & data probably a dead loss" instead need validation tools. #BOSC2013 #ismbeccb
358137209050124288 Jul 19 04:12 @braincode RT @luispedrocoelho: "It's the potential for commercial opportunities which pushes politicians to like openness in research" (!) #ismbeccb #BOSC2013
358137223377461248 Jul 19 04:12 @jandot Does anyone automatically forward #googleplus posts to #twitter? Trying to find a good way to do this #ismbeccb #bosc2013
358137496275664896 Jul 19 04:13 @team_myGrid RT @GigaScience: .@CameronNeylon "nobody ever got a nobel prize for infrastructure" #BSOC2013 #ismbeccb
358137513308733440 Jul 19 04:13 @Chris_Evelo Some drugs used for life style related diseases did not lead to changes in this selected causal networks (life style does!) #ismbeccb #nbsig
358139669512736768 Jul 19 04:22 @yaydinson RT @Chris_Evelo: In the end TK's approach leads to a method to selected effective interventions preventing disease #nbsig #ismbeccb
358139905123172354 Jul 19 04:23 @arneelof Disorder session keynote by Keith presenting mainly 2-5 years old results. #3dsig #ismbeccb
358140071582924800 Jul 19 04:23 @danmaclean RT @luispedrocoelho: "It's the potential for commercial opportunities which pushes politicians to like openness in research" (!) #ismbeccb #BOSC2013
358140215862767616 Jul 19 04:24 @StacySlagor My pleasure! RT @manuelcorpas Nice to see @StacySlagor at #GOBLET meeting #ISMBECCB
358141085761404928 Jul 19 04:27 @mfenner RT @GigaScience: .@CameronNeylon "peer review of software & data probably a dead loss" instead need validation tools. #BOSC2013 #ismbeccb
358141129805795328 Jul 19 04:27 @mfenner RT @luispedrocoelho: "You don't evaluate software quality by the impact factor of the journal it is published in" @CameronNeylon #ismbeccb #BOSC2013
358142046541844480 Jul 19 04:31 @AlonKeinan Martin Kircher from Shendure lab on a framework for estimating the relative pathogenicity of human genetic variants. #ismbeccb #SNPSIG
358142281742028800 Jul 19 04:32 @arneelof Conclusion by Dunkeris that we need five or ten more years of studies to know why disorder is there and what it does #3dsig #ismbeccb
358145320523673600 Jul 19 04:44 @DNADigest RT @luispedrocoelho: "We have unit tests in the wet lab, we call them controls" @CameronNeylon #ismbeccb #BOSC2013
358145573561446400 Jul 19 04:45 @bffo which room is goblet meeting in? #ismbeccb
358146549999607808 Jul 19 04:49 @satagopam Open science data framework: a could enabled system to store, access, and analyse scientific data by Anup Muhurkar #BOSC2013 #ISMBECCB
358146687283372033 Jul 19 04:49 @AlonKeinan MK: introduces c-score for deleteriousness, use SVM to train on practically all annotations predictions out there #ismbeccb #SNPSIG
358146909443063808 Jul 19 04:50 @AlonKeinan MK: training set: benign are all mutations fixedin humans for derived allele; deleterious are simulated random mutations #ismbeccb #SNPSIG
358147279657504768 Jul 19 04:52 @AlonKeinan MK: computed (and available) c-score for all possible 9 billion potential SNVs on the human reference #ismbeccb #SNPSIG
358147342966333440 Jul 19 04:52 @OBF_BOSC Just a reminder, the #BOSC2013 schedule is online here http://www.open-bio.org/wiki/BOSC_2013_Schedule and we aim to have most slides online afterwards #ISMBECCB
358147792163708929 Jul 19 04:54 @AlonKeinan Bjoern Stade on snpActs: A versatile analysis tool for annotating and prioritizing SNV data sets #ismbeccb #SNPSIG
358148200948957185 Jul 19 04:55 @bffo .@BioMickWatson ok, I will have to miss #GOBLET then, hope you guys are having a great day, see you later tomorrow or at #ISMBECCB ?
358148245408579584 Jul 19 04:56 @reactome Natasa Przulj - hairballs frequently appear with biological networks! #netbiosig #ismbeccb
358148247207952385 Jul 19 04:56 @robinhaw Natasa Przulj - hairballs frequently appear with biological networks! #netbiosig #ismbeccb
358148273741529088 Jul 19 04:56 @Chris_Evelo Natasa Przulj network topology (as derived from experimental information) is a source biological information. How do we get it out #ismbeccb
358148997644423168 Jul 19 04:59 @satagopam Anup using CVs - MIGS, MIMS, MIMARKS #ismbeccb #BOSC2013
358149020935393283 Jul 19 04:59 @Chris_Evelo NP graphlets (described in 2007) describe connections and symmetry can be used for wiring similarity analysis #ismbeccb #nbsig
358149195783352320 Jul 19 04:59 @GigaScience The GSC will be happy, as Anup Mahurkar says OSDF making sure they follow MiXS standards http://gensc.org/index.php?title=MIxS #BOSC2013 #ISMBECCB
358152123982168065 Jul 19 05:11 @Chris_Evelo NP alignment of networks based on different techniques (eg PPI & coexpression) finds functionally related clusters #ismbeccb #netbiosig
358152922770583555 Jul 19 05:14 @Chris_Evelo The de facto standard hashtag for the network biology sig at #ismbeccb is #netbiosig (would have preferred shorter #nbsig)
358153633222758401 Jul 19 05:17 @GenomeBiology Not sure whether it's #ISMBECCB, #ISMB2013 or #ISMB13 - but, either way, make sure you look out for Genome Biology's Editor, Clare Garvey
358154632394047488 Jul 19 05:21 @GigaScience Now up is Judy Klemm presenting on the open developments at the NCI Cancer Informatics program #BOSC2013 #ISMBECCB
358155054895071232 Jul 19 05:23 @DNADigest RT @GigaScience: Now up is Judy Klemm presenting on the open developments at the NCI Cancer Informatics program #BOSC2013 #ISMBECCB
358155229188984832 Jul 19 05:23 @luispedrocoelho "Don't figure it all out, take action, and iterate" #BOSC2013 #ISMBECCB
358155621624848384 Jul 19 05:25 @arneelof Roland Dunbrack is describing his work in bioligcal relecant interfaces #ismbeccb #3dsig
358155864839962624 Jul 19 05:26 @Chris_Evelo NP answering questions: we don't tweak our network alignment methods for better results in specific conditions! #ismbeccb #netbiosig
358156395083866112 Jul 19 05:28 @manuelcorpas RT @luispedrocoelho: "Don't figure it all out, take action, and iterate" #BOSC2013 #ISMBECCB
358156396937748480 Jul 19 05:28 @luispedrocoelho "May all of your problems be technical." Jim Gray quoted at #BOSC2013 #ISMBECCB
358156732528619520 Jul 19 05:29 @bffo .@jklemm talking about some of the challenges on working with cancer biology software - technical stuff was easy! #ismbeccb #BOSC2013
358156961478893569 Jul 19 05:30 @DNADigest RT @bffo: .@jklemm talking about some of the challenges on working with cancer biology software - technical stuff was easy! #ismbeccb #BOSC2013
358156997075546112 Jul 19 05:30 @Chris_Evelo Social science: RT @manuelcorpas: RT @luispedrocoelho: "Don't figure it all out, take action, and iterate" #BOSC2013 #ISMBECCB”
358157102772002816 Jul 19 05:31 @manuelcorpas RT @dnadigest: #BOSC2013 @jklemm "may all your problems be technical" let's hold on to that as our thought for today :-) #ISMBECCB
358157924243222528 Jul 19 05:34 @laxvid #ISMBECCB Michelle Scott. Investigation of a possible role for stably accumulating snoRNA-derived small RNAs in the reg alternative splice
358158638365421568 Jul 19 05:37 @OBF_BOSC RT @bffo: .@jklemm talking about some of the challenges on working with cancer biology software - technical stuff was easy! #ismbeccb #BOSC2013
358159109461254144 Jul 19 05:39 @Chris_Evelo David Amar shows how the construction, alignment and within pathway/complex and between network connections really work #ismbeccb #netbiosig
358160191176450048 Jul 19 05:43 @arneelof To identify surface core residues you need to use closer sequence homologs. 60% identity #3dsig #ismbeccb
358160319635398656 Jul 19 05:44 @luispedrocoelho I'm up next at #BOSC2013 #ISMBECCB to talk about jug: https://jug.readthedocs.org/ !
358160339310870528 Jul 19 05:44 @reactome David Amar gave a very interesting talk on creating module maps #netbiosig #ismbeccb
358160340917305345 Jul 19 05:44 @robinhaw David Amar gave a very interesting talk on creating module maps #netbiosig #ismbeccb
358160461444820992 Jul 19 05:44 @reactome 10 posters presentation in 25 minutes, #netbiosig #ismbeccb
358160463223193602 Jul 19 05:44 @robinhaw 10 posters presentation in 25 minutes, #netbiosig #ismbeccb
358160521079435266 Jul 19 05:44 @ISMBECCB @GenomeBiology The official hashtag is #ismbeccb. Looking forward to having Clare attend!
358160618919968769 Jul 19 05:45 @Chris_Evelo Getting ready for 10 poster teasers in 25 minutes at #netbiosig #ismbeccb
358160720480833537 Jul 19 05:45 @GenomeBiology RT @ISMBECCB: @GenomeBiology The official hashtag is #ismbeccb. Looking forward to having Clare attend!
358160947619168256 Jul 19 05:46 @reactome biotapestry at ISB, creates gene regulatory networks #netbiosig #ismbeccb
358160948701720576 Jul 19 05:46 @robinhaw biotapestry at ISB, creates gene regulatory networks #netbiosig #ismbeccb
358160950324494336 Jul 19 05:46 @Chris_Evelo Biotapestry allows arrangement of results based on high level biology view #netbiosig #ismbeccb
358161016409956352 Jul 19 05:46 @VickySchneiderG @GenomeAnalysis team discussing #GOBLET long term sustainability with commitment and benefits for users #ISMBECCB http://t.co/f4ouyVQO3c
358161200594423809 Jul 19 05:47 @GenomeAnalysis RT @VickySchneiderG: @GenomeAnalysis team discussing #GOBLET long term sustainability with commitment and benefits for users #ISMBECCB http://t.co/f4ouyVQO3c
358161203903725568 Jul 19 05:47 @reactome lusima escudero is using network analysis to study neuromuscular disease #netbiosig #ismbeccb
358161207527604224 Jul 19 05:47 @robinhaw lusima escudero is using network analysis to study neuromuscular disease #netbiosig #ismbeccb
358161382610448384 Jul 19 05:48 @reactome qtlnetminer - candidate gene discovery for knowledge discovery #netbiosig #ismbeccb
358161384518860801 Jul 19 05:48 @robinhaw qtlnetminer - candidate gene discovery for knowledge discovery #netbiosig #ismbeccb
358161425908236288 Jul 19 05:48 @mkutmon QTLNETMINER - candidate gene discovery webtool #netbiosig #ismbeccb
358161437065101312 Jul 19 05:48 @laxvid @laxvid #ISMBECCB
358161839697309696 Jul 19 05:50 @arneelof Now Tim Wiegels talking about how to get more complete models from density maps #ismbeccb
358161853999878144 Jul 19 05:50 @reactome tim kacprowski is talking about a gene prioritizer using own data in biological networks #netbiosig #ismbeccb
358161855782457345 Jul 19 05:50 @robinhaw tim kacprowski is talking about a gene prioritizer using own data in biological networks #netbiosig #ismbeccb
358162113379827712 Jul 19 05:51 @ongenetics Michelle Scott #ISMBECCB #RNASIG snoRNA-derived small RNAs appear to have unique expression patterns, may regulate alternative splicing.
358162168237543424 Jul 19 05:51 @reactome visualizing open linked data (in TRIPLES) in pathways and networks using cityscape with semscape and pathway loom #netbiosig #ismbeccb
358162169696759808 Jul 19 05:51 @robinhaw visualizing open linked data (in TRIPLES) in pathways and networks using cityscape with semscape and pathway loom #netbiosig #ismbeccb
358162235857707008 Jul 19 05:51 @manuelcorpas #ISMBECCB one presentation down 3 more to go! #GOBLET
358162467534282752 Jul 19 05:52 @Chris_Evelo PathVisio Loom a curator assistant tool, allowing to get suggestions for pathway extensions from various data sources #netbiosig #ismbeccb
358162583800393728 Jul 19 05:53 @PathVisio @andrawaag has a poster about PathwayLoom, a PathVisio plugin to find known first neighbors of a node in a pathway. #netbiosig #ismbeccb
358162617736507392 Jul 19 05:53 @reactome natasa djurdevac (ZIB) is using a random walk based algorithms to understand biological networks #netbiosig #ismbeccb
358162619376476161 Jul 19 05:53 @robinhaw natasa djurdevac (ZIB) is using a random walk based algorithms to understand biological networks #netbiosig #ismbeccb
358162955449675776 Jul 19 05:54 @arneelof Nice intro to model building #3dsig #ismbeccb
358162994540199936 Jul 19 05:54 @reactome high thoroughput data integration, network inference and pathway prediction #netbiosig #ismbeccb
358162996339556352 Jul 19 05:54 @robinhaw high thoroughput data integration, network inference and pathway prediction #netbiosig #ismbeccb
358163408140505088 Jul 19 05:56 @GigaScience Markus List now on an open LIMS system developed at Uni of Southern Denmark called OpenLabFramework #BOSC2013 #ISMBECCB
358163424670253057 Jul 19 05:56 @reactome massive associative k-biclustering #netbiosig #ismbeccb
358163426557698048 Jul 19 05:56 @robinhaw massive associative k-biclustering #netbiosig #ismbeccb
358163729310949376 Jul 19 05:57 @reactome dexter pratt, google docs for scientists with networks - share, store and publish cytoscape networks #netbiosig #ismbeccb
358163731051581441 Jul 19 05:57 @robinhaw dexter pratt, google docs for scientists with networks - share, store and publish cytoscape networks #netbiosig #ismbeccb
358163967098617856 Jul 19 05:58 @Alexbateman1 I'm enjoying the ISCB Student Council Symposium at ISMB/ECCB #ismbeccb
358164214445117440 Jul 19 05:59 @Chris_Evelo Ideker lab creating "Google Doc" like method to share network data. Useful for eg CyTargetLinker RINs #ismbeccb #netbiosig
358164242572537856 Jul 19 05:59 @DNADigest RT @GigaScience: Markus List now on an open LIMS system developed at Uni of Southern Denmark called OpenLabFramework #BOSC2013 #ISMBECCB
358164279209373696 Jul 19 05:59 @arneelof improved medium resolution models by using non crystallography symmetry and better loop modeling #ismbeccb
358164287526670336 Jul 19 05:59 @WonderMixTape RT @Chris_Evelo: Ideker lab creating "Google Doc" like method to share network data. Useful for eg CyTargetLinker RINs #ismbeccb #netbiosig
358164302349352960 Jul 19 05:59 @reactome inna kuperstein, using @reactome data and #sbgn to create atlas of cancer signaling network and navicell #netbiosig #ismbeccb
358164303863488512 Jul 19 05:59 @robinhaw inna kuperstein, using @reactome data and #sbgn to create atlas of cancer signaling network and navicell #netbiosig #ismbeccb
358165132175622145 Jul 19 06:03 @GigaScience Would be fun to have a similar discussion for "How Not to Be a Bioinformatician" next year http://www.scfbm.org/content/7/1/3 #BOSC2013 #ISMBECCB
358165143458287616 Jul 19 06:03 @WonderMixTape Modeling #CNV with disjoint paths #ISMBECCB #HiTSeq
358165197581586432 Jul 19 06:03 @WonderMixTape Viral quasispecies reconstruction as general case of polyploid haplotype assembly #ISMBECCB #HiTSeq
358165487181496321 Jul 19 06:04 @luispedrocoelho "Automate things so you never have to think about them ever ever again" #BOSC2013 #ISMBECCB
358165921841422336 Jul 19 06:06 @arneelof Next keynote is Patricia Babbitt who will talk about mapping 3d structures to protein similarity mapping #3dsig #ismbeccb
358166057347194880 Jul 19 06:06 @arneelof RT @luispedrocoelho: "Automate things so you never have to think about them ever ever again" #BOSC2013 #ISMBECCB
358166134698160128 Jul 19 06:07 @soilandreyes RT @luispedrocoelho: "Automate things so you never have to think about them ever ever again" #BOSC2013 #ISMBECCB
358166420850356224 Jul 19 06:08 @bffo markus list from openlabframework discussing open LIMsS software , challenging IMHO #ismbeccb #BOSC2013 https://github.com/NanoCAN/OpenLabFramework/wiki
358166434934816768 Jul 19 06:08 @luispedrocoelho "If you contribute to a larger project, this is good for everyone; but academic recognition systems does not reward it" #BOSC2013 #ISMBECCB
358166455134588928 Jul 19 06:08 @AlonKeinan Keynote by Manolis Kellis, "Integrating genetic and epigenetic variation in Alzheimer's disease". Standing room only. #ismbeccb #SNPSIG
358166551440007168 Jul 19 06:08 @WonderMixTape Adaptive reference-free compression of sequence quality scores - Anthony Cox @illumina Cambridge #ISMBECCB #HiTSeq
358166664912707585 Jul 19 06:09 @propicee At #ismbeccb , enjoyed #Alexbateman1's talk a lot.
358166802494271488 Jul 19 06:09 @AlonKeinan MK can go head-to-head with George Church with regards to results-presented-per-minutes rate #ismbeccb #SNPSIG
358167313662476288 Jul 19 06:11 @bffo wish I would have been there! 2 many gr8 parallel sessions! “@propicee: At #ismbeccb , enjoyed #Alexbateman1's talk a lot.” #ISMBECCB
358167824314802178 Jul 19 06:13 @WonderMixTape Adaptive reference-free compression reference: http://tinyurl.com/m3m3n8v #ISMBECCB #HiTSeq
358168439489175552 Jul 19 06:16 @satagopam Circular RNAs and miRNAs talk by Nikolaus Rajewski #ISMBECCB #IRG-SIG
358168892050374658 Jul 19 06:18 @satagopam iPAR-CLIP method to target RNA binding proteins #ISMBECCB #IRG-SIG
358169166529830912 Jul 19 06:19 @mkutmon http://acsn.curie.fr - signaling networks for the hallmarks of cancer. #netbiosig #ismbeccb
358169625617383424 Jul 19 06:21 @satagopam iCLASH : add a ligation step -> thousands of miRNA:target duplexes came from CLASH #ISMBECCB #IRG-SIG
358169993500188672 Jul 19 06:22 @mkutmon NDEx project: collaborative repository for biological networks. Awesome! #netbiosig #ismbeccb
358170057681022976 Jul 19 06:22 @satagopam 60% of miRNA targets are explained by seed model #ISMBECCB #IRG-SIG
358170221489565696 Jul 19 06:23 @satagopam non-seed pairing seem also functional #ISMBECCB #IRG-SIG
358171233776443392 Jul 19 06:27 @RSGArgentina #SCS #ISMBECCB Workshop: @ThomasAbeel Presenting your science visually!
358171458154921985 Jul 19 06:28 @Colin_at_cu sweet looks like both #ismbeccb #BOSC2013 are trending tags. i might do #gmod2013 for my class.
358171487586357249 Jul 19 06:28 @satagopam miR-7 was one of the miRNA very well evolutionarily conserved in several lineages #ISMBECCB #IRG-SIG
358172070837878784 Jul 19 06:30 @luispedrocoelho "The most downloaded PLoS paper are often not highly cited, except on reddit" @CameronNeylon #BOSC2013 #ISMBECCB
358172169999618049 Jul 19 06:31 @satagopam Sponge and miR-7 are co-expressed in brain tissues #ISMBECCB #IRG-SIG
358172559038087170 Jul 19 06:32 @satagopam miR-7 KB strongly impairs midbrain development in zebrafish #ISMBECCB #IRG-SIG
358172756719845376 Jul 19 06:33 @nskunca Loads of useful information and links from Thomas Abeel on presenting science visually at the Student Council Symposium #ismbeccb
358173051227082753 Jul 19 06:34 @satagopam 1950 circRNAs in human and 742 in C. elegant #ISMBECCB #IRG-SIG
358173646679838720 Jul 19 06:37 @jacarrico RT @luispedrocoelho: "The most downloaded PLoS paper are often not highly cited, except on reddit" @CameronNeylon #BOSC2013 #ISMBECCB
358173797058228224 Jul 19 06:37 @ongenetics Rajewski #ISMBECCB #RNASIG describes the circular miRNA sponge (CDR1as) that titrates miR-7, finds other "exons with a 2nd life" as circles
358174230166249472 Jul 19 06:39 @satagopam RNAseR degrades linear molecules, but not the circular RNAs, a method used to filer the circRNAs #ISMBECCB #IRG-SIG
358174291214348288 Jul 19 06:39 @pedrobeltrao A lot of people in Berlin already for ISMB/ECCB http://www.iscb.org/ismbeccb2013 I am going tomorrow #ISMBECCB
358174727661420544 Jul 19 06:41 @GholsonLyon RT @AlonKeinan: MK: introduces c-score for deleteriousness, use SVM to train on practically all annotations predictions out there #ismbeccb #SNPSIG
358174769126326272 Jul 19 06:41 @GholsonLyon RT @AlonKeinan: MK: computed (and available) c-score for all possible 9 billion potential SNVs on the human reference #ismbeccb #SNPSIG
358174859748052992 Jul 19 06:41 @jjspr Registered today at #ismbeccb looking forward to this interesting conference
358175170659229696 Jul 19 06:43 @satagopam circular RNA can function as a negative regulator of miR-7; interaction has migration LOF phenotype - important in brain #ISMBECCB #IRG-SIG
358175451543375872 Jul 19 06:44 @satagopam Sponge hightest mirR bininding capaciy of any know trans 300x70 mir/cell #ISMBECCB #IRG-SIG
358175886605946880 Jul 19 06:46 @satagopam Discovered thousands of stably & well expfess circRNAs,Nicolau lab and Salzman et al 2012 , Jeck et al 2013 #ISMBECCB #IRG-SIG
358176256262545410 Jul 19 06:47 @satagopam "circRANs new class of post-transcipional regulators" Nicolau #ISMBECCB #IRG-SIG
358177091587940352 Jul 19 06:50 @xanderpico RT @mkutmon: NDEx project: collaborative repository for biological networks. Awesome! #netbiosig #ismbeccb
358182871359438848 Jul 19 07:13 @i_am_kilpatrick Sorry for the lack of SCS poster - online version at: http://bit.ly/kilpatrick_poster - Will hopefully have it in time for RegGen SIG 2mrw! #ismbeccb
358183812099874817 Jul 19 07:17 @i_am_kilpatrick Great student talks this morn, esp. Deborah Chasman on yeast salt stress response & Han Cheng Lie on curse of dimensionality #scs #ismbeccb
358188448332525568 Jul 19 07:35 @mkutmon Afternoon session #netbiosig #ismbeccb about to start with keynote by Esti Yeger-Lotem.
358189358592950272 Jul 19 07:39 @reactome Esti Yeger-Lotem is going to talk about human PPI and tissue interactomes #netbiosig #ismbeccb
358189360400695298 Jul 19 07:39 @robinhaw Esti Yeger-Lotem is going to talk about human PPI and tissue interactomes #netbiosig #ismbeccb
358190448717742082 Jul 19 07:43 @researchobject WF4EVER @ ISMB/ECCB 2013 #ismbeccb.
358190491210620928 Jul 19 07:44 @Chris_Evelo RT @reactome: Esti Yeger-Lotem is going to talk about human PPI and tissue interactomes #netbiosig #ismbeccb
358190972967981056 Jul 19 07:45 @larsjuhljensen Esti Yeger-Lotem - interesting presentation on protein interactions and tissue expression #NetBioSig #ISMBECCB
358191293962264576 Jul 19 07:47 @Chris_Evelo Esti combines PPI with expression data, interacting proteins often also correlated in expression #ismbeccb #netbiosig
358191311121166337 Jul 19 07:47 @larsjuhljensen Most hereditary diseases are manifested in only one or two tissues #NetBioSig #ISMBECCB
358191348555329537 Jul 19 07:47 @jaumebp At the #MachineLearning in #SystemsBiology (#MLSB) SIG meeting in #ISMBECCB 2013
358191615355002881 Jul 19 07:48 @researchobject Technology Track: Marco Ross chairing "Technology for sharing methods and data of computational experiments in a digital era". #ismbeccb.
358192018670891009 Jul 19 07:50 @larsjuhljensen Many disease genes are not tissue specific, but have tissue specific interaction partners #NetBioSig #ISMBECCB
358192204319162368 Jul 19 07:50 @Chris_Evelo To combine different kinds of PPI and gene expression data BridgeDB might come in handy if different ID systems used. #ismbeccb #netbiosig
358192781455400962 Jul 19 07:53 @mkutmon TissueNet database. Tissue specific interactomes. #netbiosig #ismbeccb
358193853658320896 Jul 19 07:57 @emblebi RT @reactome: Esti Yeger-Lotem is going to talk about human PPI and tissue interactomes #netbiosig #ismbeccb
358193960923435008 Jul 19 07:57 @emblebi RT @Alexbateman1: I'm enjoying the ISCB Student Council Symposium at ISMB/ECCB #ismbeccb
358193983215771648 Jul 19 07:57 @Chris_Evelo RT @larsjuhljensen: Many disease genes are not tissue specific, but have tissue specific interaction partners #NetBioSig #ISMBECCB
358194700257198081 Jul 19 08:00 @researchobject ISMB/ECCB Keynote: Results may vary: what is reproducible? why do open science and who gets the credit? July 23rd @CaroleAnneGoble #ismbeccb
358194715742576642 Jul 19 08:00 @Chris_Evelo Esti answering question "if it is tissue specific interactions isn't it really cell type specific?" "Yes!" #ismbeccb #netbiosig
358195056236167169 Jul 19 08:02 @mkutmon Gang Su presenting 'coolMap' at #netbiosig #ismbeccb.
358195789639581696 Jul 19 08:05 @reactome Gang Su, heatmaps have been used since 1873 (Loua) #netbiosig #ismbeccb
358195791279554560 Jul 19 08:05 @robinhaw Gang Su, heatmaps have been used since 1873 (Loua) #netbiosig #ismbeccb
358196337184997380 Jul 19 08:07 @danmaclean RT @robinhaw: Gang Su, heatmaps have been used since 1873 (Loua) #netbiosig #ismbeccb
358196341316386817 Jul 19 08:07 @ethanwhite RT @luispedrocoelho: "You don't evaluate software quality by the impact factor of the journal it is published in" @CameronNeylon #ismbeccb #BOSC2013
358196623802773504 Jul 19 08:08 @larsjuhljensen CoolMap - cooler than heatmaps. But where do I find it? #GoogleFail #NetBioSig #ISMBECCB
358196668774514688 Jul 19 08:08 @pjacock RT @luispedrocoelho: "You don't evaluate software quality by the impact factor of the journal it is published in" @CameronNeylon #ismbeccb #BOSC2013
358196844863971328 Jul 19 08:09 @MatthewBStocks RT @luispedrocoelho: "You don't evaluate software quality by the impact factor of the journal it is published in" @CameronNeylon #ismbeccb #BOSC2013
358196919543558144 Jul 19 08:09 @kaythaney RT @luispedrocoelho: "You don't evaluate software quality by the impact factor of the journal it is published in" @CameronNeylon #ismbeccb #BOSC2013
358197489083482112 Jul 19 08:11 @danmaclean RT @larsjuhljensen: CoolMap - cooler than heatmaps. But where do I find it? #GoogleFail #NetBioSig #ISMBECCB
358197520461070338 Jul 19 08:11 @danmaclean RT @luispedrocoelho: "You don't evaluate software quality by the impact factor of the journal it is published in" @CameronNeylon #ismbeccb #BOSC2013
358197843456040961 Jul 19 08:13 @WonderMixTape Mate-CLEVER - focused on good performance to detect deletions in size range of 30-100bp #ISMBECCB #HiTSeq
358198010288680960 Jul 19 08:13 @mkutmon Collapsible heat maps with CoolMap @gangsu #netbiosig #ismbeccb.
358198512355258369 Jul 19 08:15 @tmccormick @kaythaney “’You don’t eval software by impact factor’ @CameronNeylon #ismbeccb #BOSC2013”: you see if it works, can’t usu do that w/paper.
358199079895302144 Jul 19 08:18 @dasmoth RT @tmccormick: @kaythaney “’You don’t eval software by impact factor’ @CameronNeylon #ismbeccb #BOSC2013”: you see if it works, can’t usu do that w/paper.
358199383843946496 Jul 19 08:19 @jmchilton RT @tmccormick: @kaythaney “’You don’t eval software by impact factor’ @CameronNeylon #ismbeccb #BOSC2013”: you see if it works, can’t usu do that w/paper.
358199929807716354 Jul 19 08:21 @Janis3_14159 RT @larsjuhljensen: Many disease genes are not tissue specific, but have tissue specific interaction partners #NetBioSig #ISMBECCB
358199950020067330 Jul 19 08:21 @Janis3_14159 RT @larsjuhljensen: Most hereditary diseases are manifested in only one or two tissues #NetBioSig #ISMBECCB
358200407765417985 Jul 19 08:23 @manuelcorpas RT @larsjuhljensen: Most hereditary diseases are manifested in only one or two tissues #NetBioSig #ISMBECCB
358200457857998848 Jul 19 08:23 @mkutmon Tijana Milenko: networks and aging. #netbiosig #ismbeccb
358201130976690176 Jul 19 08:26 @WonderMixTape Benchmarking recall deletions: 10-29bp: PINDEL; 30-49bp: MATE-CLEVER; 50-99: COMMON-LAW; 100-249bp: MATE-CLEVER #ISMBECCB #HiTSeq
358201184747663362 Jul 19 08:26 @larsjuhljensen Tijana Milenkovic: network alignment based analysis of human aging #NetBioSig #ISMBECCB
358202482712772609 Jul 19 08:31 @WonderMixTape Clinical germline #CNVs 5-10% of all mendelian diseases (#s are underestimate) #ISMBECCB #HiTSeq
358202978299166721 Jul 19 08:33 @larsjuhljensen Open Access: Do Not Enter #OpenAccess #ISMBECCB http://t.co/T4Uy3RP8DB
358203101200646144 Jul 19 08:34 @WonderMixTape CNVitae Talk by @InVitae 's Joshua Paul - Clinical Omics #NGS single exon CNV estimates from targeted sequencing #ISMBECCB #HiTSeq
358203655419613184 Jul 19 08:36 @itisalist RT @luispedrocoelho: "nobody ever got a Nobel Prize for building great infrastructure" @CameronNeylon #ismbeccb #BOSC2013
358203685110689792 Jul 19 08:36 @luispedrocoelho "a visualization is already an interpretation of the data, it may be wrong" #ismbeccb #BOSC2013
358203873384607747 Jul 19 08:37 @homolog_us RT @larsjuhljensen: Open Access: Do Not Enter #OpenAccess #ISMBECCB http://t.co/T4Uy3RP8DB
358204113667895296 Jul 19 08:38 @soilandreyes RT @luispedrocoelho: "a visualization is already an interpretation of the data, it may be wrong" #ismbeccb #BOSC2013
358204288944062464 Jul 19 08:38 @itisalist RT @luispedrocoelho: "We have unit tests in the wet lab, we call them controls" @CameronNeylon #ismbeccb #BOSC2013
358204382971559937 Jul 19 08:39 @tvatanen At #ISMBECCB in Berlin. High-throughput sequencing and SNP-SIG meeting
358204481571258370 Jul 19 08:39 @bffo classic picture! RT @larsjuhljensen: Open Access: Do Not Enter #OpenAccess #ISMBECCB http://t.co/2INHVSKkM7
358204681085911040 Jul 19 08:40 @GenomicsIo RT @bffo: classic picture! RT @larsjuhljensen: Open Access: Do Not Enter #OpenAccess #ISMBECCB http://t.co/2INHVSKkM7
358204851106234369 Jul 19 08:41 @Alexbateman1 RT @bffo: classic picture! RT @larsjuhljensen: Open Access: Do Not Enter #OpenAccess #ISMBECCB http://t.co/2INHVSKkM7
358205280342904832 Jul 19 08:42 @WonderMixTape CNVitae models counts -> neg binom; Model dev to id CNVs; Per target mean = mixture of baseline samples (neg binom regression) #ISMBECCB
358205370012925952 Jul 19 08:43 @WonderMixTape RT @bffo: classic picture! RT @larsjuhljensen: Open Access: Do Not Enter #OpenAccess #ISMBECCB http://t.co/2INHVSKkM7
358205438438817792 Jul 19 08:43 @fabiomarroni RT @larsjuhljensen: Open Access: Do Not Enter #OpenAccess #ISMBECCB http://t.co/T4Uy3RP8DB
358205795701231618 Jul 19 08:44 @Chris_Evelo RT @bffo: classic picture! RT @larsjuhljensen: Open Access: Do Not Enter #OpenAccess #ISMBECCB http://t.co/YGN7I6nkNK
358206237898731520 Jul 19 08:46 @bioinformer RT @bffo: classic picture! RT @larsjuhljensen: Open Access: Do Not Enter #OpenAccess #ISMBECCB http://t.co/2INHVSKkM7
358206321083957248 Jul 19 08:46 @danmaclean Biodalliance - best named genome browser! #ISMBECCB
358206393121120256 Jul 19 08:47 @ypriverol RT @luispedrocoelho: "You don't evaluate software quality by the impact factor of the journal it is published in" @CameronNeylon #ismbeccb #BOSC2013
358206415451602948 Jul 19 08:47 @danmaclean RT @danmaclean: Biodalliance - best named genome browser! #ISMBECCB #BOSC2013
358207002658349056 Jul 19 08:49 @jonathancairns RT @Chris_Evelo: RT @bffo: classic picture! RT @larsjuhljensen: Open Access: Do Not Enter #OpenAccess #ISMBECCB http://t.co/YGN7I6nkNK
358207282745589762 Jul 19 08:50 @janosbinder RT @larsjuhljensen: Open Access: Do Not Enter #OpenAccess #ISMBECCB http://t.co/T4Uy3RP8DB
358207479332605953 Jul 19 08:51 @mkutmon Vuk Janjic: the journey to the core of human disease #netbiosig #ismbeccb
358207687734988801 Jul 19 08:52 @luispedrocoelho "It is designed to be a good citizen" (Thomas Down on Biodalliance) #BOSC2013 #ISMBECCB
358207817800359936 Jul 19 08:52 @Chris_Evelo Interestingly network alignments, e.g. for ageing, helps to get rid of network noise instead of failing from it. Tijana Milenkovic #ISMBECCB
358208191022526464 Jul 19 08:54 @robinhaw priceless! RT @larsjuhljensen: Open Access: Do Not Enter #OpenAccess #ISMBECCB http://t.co/BFjcPuTo4L
358208279899422722 Jul 19 08:54 @WonderMixTape Identification of deleterious synonymous variants in human genomes http://tinyurl.com/mqcmo24 #ISMBECCB #HiTSeq
358208675447443456 Jul 19 08:56 @Alexbateman1 Talk on expansion of dangerous genes by Severine Affeldt at Student council symposium #ismbeccb #soundsworrying
358208738433306624 Jul 19 08:56 @WonderMixTape Silent Variant Analyzer (SilVA) http://tinyurl.com/mnj5vpj #ISMBECCB #HiTSeq
358209021020348418 Jul 19 08:57 @Alexbateman1 Great use of Mediation http://en.wikipedia.org/wiki/Mediation_%28statistics%29 by Severine Affeldt to understand mechanism of dangerous genes #ISMBECCB
358209163681210369 Jul 19 08:58 @watsonhaigh RT @neilfws: Another year, another weekend not at ISMB :( Never mind, follow along @ISMBECCB and #ismbeccb
358211286061944833 Jul 19 09:06 @santiago_baos RT @luispedrocoelho: "You don't evaluate software quality by the impact factor of the journal it is published in" @CameronNeylon #ismbeccb #BOSC2013
358211452034748416 Jul 19 09:07 @Chris_Evelo Not so promising then? VJ the core diseasome is not so big (around 100 genes) and already highly targeted by existing drugs #ismbeccb
358211769153495040 Jul 19 09:08 @jimtill RT @bffo: classic picture! RT @larsjuhljensen: Open Access: Do Not Enter #OpenAccess #ISMBECCB http://t.co/2INHVSKkM7
358212816571875328 Jul 19 09:12 @Chris_Evelo VJ: G-protein coupled receptors and their interacting partners are important part of the core diseasome. #ismbeccb #netbiosig
358213045207576576 Jul 19 09:13 @InterProDB Hope everyone enjoys this year's #ismbeccb. InterPro will be attending the AFP SIG. Hope to see some of you there!
358213104817020929 Jul 19 09:13 @larsjuhljensen "Highly homologous" - that term just hurts #NetBioSig #ISMBECCB
358213223880728576 Jul 19 09:14 @soilandreyes Significant #BOSC2013 and #ISMBECCB presence by @team_myGrid this year: http://www.mygrid.org.uk/2013/07/mygrid-and-taverna-at-ismb-2013-and-bosc-2013/ including keynote by @CaroleAnneGoble on Tue.
358214084862279680 Jul 19 09:17 @EBImetagenomics EBI metagenomics will be at #ISMBECCB this year. Come and visit us at poster I10 and at the @emblebi booth
358214152835182593 Jul 19 09:18 @danmaclean RT @larsjuhljensen: "Highly homologous" - that term just hurts #NetBioSig #ISMBECCB
358214173203120128 Jul 19 09:18 @frank_foerster RT @bffo: classic picture! RT @larsjuhljensen: Open Access: Do Not Enter #OpenAccess #ISMBECCB http://t.co/2INHVSKkM7
358214223551139840 Jul 19 09:18 @janosbinder RT @luispedrocoelho: "Automate things so you never have to think about them ever ever again" #BOSC2013 #ISMBECCB
358214226881413120 Jul 19 09:18 @reactome Stefan Schuster is showing a snapshot of the "Biochemical Pathways" published by Boehringer Mannheim #netbiosig #ismbeccb
358214228588503044 Jul 19 09:18 @robinhaw Stefan Schuster is showing a snapshot of the "Biochemical Pathways" published by Boehringer Mannheim #netbiosig #ismbeccb
358216865736175616 Jul 19 09:28 @bffo RT @larsjuhljensen: "Highly homologous" - that term just hurts #NetBioSig #ISMBECCB
358216983512219651 Jul 19 09:29 @bffo Sure does! When will it stop? RT @larsjuhljensen: "Highly homologous" - that term just hurts #NetBioSig #ISMBECCB
358217106938007552 Jul 19 09:29 @OHSUBCB @OHSUBCB Postdoc Fellow David Gibbs discusses OMICS Data Integration at #ISMBECCB in Berlin #MSSIG http://fb.me/23S8n7qzn
358217207966216193 Jul 19 09:30 @arneelof Innapropriate comment about Hamburg and their clubs in last talk before lunch at #3dsig hope to not see more of that #ismbeccb
358217222793072642 Jul 19 09:30 @WonderMixTape RT @OHSUBCB: @OHSUBCB Postdoc Fellow David Gibbs discusses OMICS Data Integration at #ISMBECCB in Berlin #MSSIG http://fb.me/23S8n7qzn
358217657411051520 Jul 19 09:31 @arneelof wwPDB introduced with a new format for pdb files (again) :-) #3dsig #ismbeccb
358217719009001472 Jul 19 09:32 @arneelof RT @larsjuhljensen: "Highly homologous" - that term just hurts #NetBioSig #ISMBECCB
358217951868366849 Jul 19 09:33 @arneelof RT @Chris_Evelo: RT @bffo: classic picture! RT @larsjuhljensen: Open Access: Do Not Enter #OpenAccess #ISMBECCB http://t.co/YGN7I6nkNK
358218529444605954 Jul 19 09:35 @aniko99 RT @bffo: classic picture! RT @larsjuhljensen: Open Access: Do Not Enter #OpenAccess #ISMBECCB http://t.co/2INHVSKkM7
358218562130833408 Jul 19 09:35 @arneelof Beautiful conference bag (mine) #ismbeccb http://t.co/Q73FNnA6pv
358219016969519106 Jul 19 09:37 @julientap RT @larsjuhljensen: Open Access: Do Not Enter #OpenAccess #ISMBECCB http://t.co/T4Uy3RP8DB
358219203494416384 Jul 19 09:38 @GenaliceDNA Excellent performance data GENALICE MAP presented at HiTSeq 2013 meeting in Berlin: http://bit.ly/1aXEDHw #ismbeccb #bioinformatics #ngs
358219352719765504 Jul 19 09:38 @klmr RT @bffo: classic picture! RT @larsjuhljensen: Open Access: Do Not Enter #OpenAccess #ISMBECCB http://t.co/2INHVSKkM7
358219750599434241 Jul 19 09:40 @Chris_Evelo Stefan Schuster: If pathway based flux analysis is down well it can be used to discover missing parts of a pathway #ISMBECCB
358220224559976449 Jul 19 09:42 @genetics_blog Archiving all #ISMB #ISMBECCB tweets on Github: https://github.com/stephenturner/twitterchive/blob/master/ismbeccb.txt. Analysis with #Rstats coming later a la http://gettinggeneticsdone.blogspot.com/2013/05/automated-analysis-tweets-bioinformatics-twitterchive.html
358220573740380160 Jul 19 09:43 @gerrit_sevilla RT @GenaliceDNA: Excellent performance data GENALICE MAP presented at HiTSeq 2013 meeting in Berlin: http://bit.ly/1aXEDHw #ismbeccb #bioinformatics #ngs
358220842238750720 Jul 19 09:44 @Bioinfomatic RT @genetics_blog: Archiving all #ISMB #ISMBECCB tweets on Github: https://github.com/stephenturner/twitterchive/blob/master/ismbeccb.txt. Analysis with #Rstats coming later a la http://t.co/WbvEQvKef7
358220919623254020 Jul 19 09:44 @genetics_blog Also, if any #ISMB #ISMBECCB folks need some comic relief, I archived all the #altbioinf tweets from a few weeks ago https://github.com/stephenturner/twitterchive/blob/master/altbioinf.txt
358221028624838656 Jul 19 09:45 @StefanieButland RT @bffo: Sure does! When will it stop? RT @larsjuhljensen: "Highly homologous" - that term just hurts #NetBioSig #ISMBECCB
358223540199243777 Jul 19 09:55 @arneelof Symmetry in proteins #ismbeccb
358223874128740352 Jul 19 09:56 @arneelof I need coffee #ismbeccb
358223940465856515 Jul 19 09:56 @ThoughtCulture RT @bffo: classic picture! RT @larsjuhljensen: Open Access: Do Not Enter #OpenAccess #ISMBECCB http://t.co/2INHVSKkM7
358224574456270848 Jul 19 09:59 @GPMDB RT @bffo: Sure does! When will it stop? RT @larsjuhljensen: "Highly homologous" - that term just hurts #NetBioSig #ISMBECCB
358224687106494465 Jul 19 09:59 @jeffk8900 RT @reactome: Benno Schwikowski encouraging developers to embrace @cytsocape v3.0 #netsigbio #ismbeccb /Yes please.
358225558104047616 Jul 19 10:03 @cdsouthan RT @larsjuhljensen: "Highly homologous" - that term just hurts #NetBioSig #ISMBECCB
358225679977938944 Jul 19 10:03 @homolog_us RT @genetics_blog: Also, if any #ISMB #ISMBECCB folks need some comic relief, I archived all the #altbioinf tweets from a few weeks ago https://t.co/XjXqHerZF3
358226384746848257 Jul 19 10:06 @larsjuhljensen Michael Schroeder: will mention the bible ... to keep the audience awake ;-) #NetBioSig #ISMBECCB
358226601621716992 Jul 19 10:07 @mkutmon Michael Schröder on PowerGraphs. #netbiosig #ismbeccb
358227267568148480 Jul 19 10:10 @Chris_Evelo Compress networks to something more understandable RT @mkutmon: Michael Schröder on PowerGraphs. #netbiosig #ismbeccb
358227440998817792 Jul 19 10:10 @emblebi RT @EBImetagenomics: EBI metagenomics will be at #ISMBECCB this year. Come and visit us at poster I10 and at the @emblebi booth
358227713712062465 Jul 19 10:11 @EDNACEDO RT @EBImetagenomics: EBI metagenomics will be at #ISMBECCB this year. Come and visit us at poster I10 and at the @emblebi booth
358228017077698561 Jul 19 10:13 @reactome Stefan Schuster: Power graph algorithms are useful to compress networks. #netbiosig #ismbeccb
358228018860277762 Jul 19 10:13 @robinhaw Stefan Schuster: Power graph algorithms are useful to compress networks. #netbiosig #ismbeccb
358228473912889345 Jul 19 10:14 @Chris_Evelo Stefan Schuster power nodes found based on topology often contain functionally related genes (e.g. same GO class) #ISMBECCB #netbiosig
358229065280393218 Jul 19 10:17 @marinkazitnik Just had a talk on data fusion at CAMDA meeting in Berlin. Great experience and received responses. #ISMBECCB
358229904543854592 Jul 19 10:20 @sk_ap Michael Schroeder: "these networks are not binary", soooo right #ismbeccb #NetBioSig
358230437769916416 Jul 19 10:22 @luispedrocoelho "We don't just participate in Google summer of code just for the code, but also to grow the community" @pjacock #BOSC2013 #ISMBECCB
358230677034385408 Jul 19 10:23 @arneelof Yana Goldman talks about beta adrenergic receptor prediction by evfold and it's limitations will present a solution #ismbeccb
358231273724063744 Jul 19 10:26 @Chris_Evelo MS: Method on interaction detection influences compressibility (which suggests quality), Y2H being less that MS and AP. #ISMBECCB #netbiosig
358231538736955392 Jul 19 10:27 @marc_rr RT @genetics_blog: Archiving all #ISMB #ISMBECCB tweets on Github: https://github.com/stephenturner/twitterchive/blob/master/ismbeccb.txt. Analysis with #Rstats coming later a la http://t.co/WbvEQvKef7
358231551110164481 Jul 19 10:27 @marc_rr RT @genetics_blog: Also, if any #ISMB #ISMBECCB folks need some comic relief, I archived all the #altbioinf tweets from a few weeks ago https://t.co/XjXqHerZF3
358231556164288512 Jul 19 10:27 @arneelof Yana Goldman refined the evfold model from 5 to 2.8 Å #ismbeccb
358231677597786112 Jul 19 10:27 @larsjuhljensen Wondering if the better compressibility of AP-MS over Y2H is a reflection of the spoke representation of pull-downs #NetBioSig #ISMBECCB
358232581952634882 Jul 19 10:31 @WonderMixTape RT @genetics_blog: Archiving all #ISMB #ISMBECCB tweets on Github: https://github.com/stephenturner/twitterchive/blob/master/ismbeccb.txt. Analysis with #Rstats coming later a la http://t.co/WbvEQvKef7
358232986052870147 Jul 19 10:32 @WonderMixTape Interesting analysis of complete & accurate networks - noted outlier: US Power Grid -issue of network heterogeneity? #ISMBECCB #netbiosig
358233947177619456 Jul 19 10:36 @WonderMixTape Power graph application for Drug Repositioning Ref: Daminelli et al Integrative Biology (2012) #ISMBECCB #netbiosig
358234438481616897 Jul 19 10:38 @bffo What ever it takes, but this is extreme :) MT @larsjuhljensen: MS: will mention the bible, 2 keep audience awake ;-) #NetBioSig #ISMBECCB
358234492802056192 Jul 19 10:38 @EduEyras RT @ongenetics: Rajewski #ISMBECCB #RNASIG describes the circular miRNA sponge (CDR1as) that titrates miR-7, finds other "exons with a 2nd life" as circles
358234853801598977 Jul 19 10:40 @EduEyras RT @luispedrocoelho: "You don't evaluate software quality by the impact factor of the journal it is published in" @CameronNeylon #ismbeccb #BOSC2013
358238477080477696 Jul 19 10:54 @iddux I've just been informed that the official tag for ISMB 2013 is #ISMBECCB. If you use another tag, we won't visit your poster :)
358238891171520512 Jul 19 10:56 @Chris_Evelo RT @iddux: I've just been informed that the official tag for ISMB 2013 is #ISMBECCB. If you use another tag, we won't visit your poster :)
358238990543372288 Jul 19 10:56 @pjacock RT @iddux: I've just been informed that the official tag for ISMB 2013 is #ISMBECCB. If you use another tag, we won't visit your poster :)
358239600709341184 Jul 19 10:59 @Chris_Evelo .@iddux The more twitter savvy a conference is the shorter the hashtag: #ismbeccb halfway between #ismb and #ismbeccb2013berlin
358240166731083776 Jul 19 11:01 @pjacock The #ISMBECCB #wifi had been working pretty well for me until now, as we approach the end of #BOSC2013 day one… hope it stays up!
358240390052184064 Jul 19 11:02 @larsjuhljensen RT @Chris_Evelo: .@iddux The more twitter savvy a conference is the shorter the hashtag: #ismbeccb halfway between #ismb and #ismbeccb2013berlin
358240784916971520 Jul 19 11:03 @_alitxu_ RT @genetics_blog: Archiving all #ISMB #ISMBECCB tweets on Github: https://github.com/stephenturner/twitterchive/blob/master/ismbeccb.txt. Analysis with #Rstats coming later a la http://t.co/WbvEQvKef7
358240971307237377 Jul 19 11:04 @OBF_BOSC RT @pjacock: The #ISMBECCB #wifi had been working pretty well for me until now, as we approach the end of #BOSC2013 day one… hope it stays up!
358241316070629376 Jul 19 11:06 @froggleston @pjacock #ISMBECCB #wifi #BOSC2013 Driving me bonkers trying to stay VPNed into work. God bless you, screen.
358241449864728576 Jul 19 11:06 @WonderMixTape Steve Brenner @CAGInews 2013 Results #ISMBECCB #SNPSIG
358241775384666112 Jul 19 11:07 @arneelof Janusz Bujnicki presents rna as the new protein. Using evolution and statistical models #3dsig #ismbeccb
358242025897865216 Jul 19 11:08 @flowing attending some SIGs at the #ISMBECCB in #Berlin over the weekend; already missing my @AlexThe55th ...
358242240897892352 Jul 19 11:09 @WonderMixTape Revisiting CAGI2011 Crohn's Disease - batch effects & variant calling issues - as well as appropriate controls #ISMBECCB #SNPSIG
358242552191152128 Jul 19 11:10 @_alitxu_ @xdopazo Patricia Sebastian-Leon is talking about pathway analysis applied to predict drug responses #camda #ismbeccb http://t.co/DVn8ap10Af
358242739416465408 Jul 19 11:11 @mcaccamo RT @VickySchneiderG: @GenomeAnalysis team discussing #GOBLET long term sustainability with commitment and benefits for users #ISMBECCB http://t.co/f4ouyVQO3c
358243356691804161 Jul 19 11:14 @WonderMixTape Personal Genome Project as form of "Genome Exhibitionism" @CAGInews #ISMBECCB #SNPSIG
358243607074988032 Jul 19 11:15 @janosbinder Wow, this hand-made poster must have been a lot of work. 88/H27-28 student symposium #ISMBECCB http://t.co/ohS9RBovHK
358243694719152128 Jul 19 11:15 @soilandreyes RT @iddux: I've just been informed that the official tag for ISMB 2013 is #ISMBECCB. If you use another tag, we won't visit your poster :)
358244418606088192 Jul 19 11:18 @arneelof RT @iddux: I've just been informed that the official tag for ISMB 2013 is #ISMBECCB. If you use another tag, we won't visit your poster :)
358244437702344705 Jul 19 11:18 @soilandreyes #BOSC2013 poster session starting really soon, come see me at this poster (#myExperiment #ResearchObject): http://www.slideshare.net/soilandreyes/2013-0718bosc-2013myexperimentresearchobjectsposter-24242509 #ISMBECCB
358244636424273920 Jul 19 11:19 @AMathelier @bffo Waiting for your tweets from #ISMBECCB as I could not make it!
358245475486412803 Jul 19 11:22 @pjacock I’ve tried to capture the BOSC 2013 Day One tweets on #storify - but missing some of the morning http://storify.com/pjacock/bosc-2013-day-one #bosc2013 #ismbeccb
358245499339415552 Jul 19 11:22 @arneelof Rna puzzle is casp for RNA reasonable 3d predictions. continuous benchmark of rna secondary structure predicting #3dsig #ismbeccb
358245735155765252 Jul 19 11:23 @marinkazitnik RT @bffo: classic picture! RT @larsjuhljensen: Open Access: Do Not Enter #OpenAccess #ISMBECCB http://t.co/2INHVSKkM7
358246332768587777 Jul 19 11:25 @mcaccamo Deserted bioinformatics offices at @GenomeAnalysis - it must be #ISMBECCB time! Looking forward to joining ISMB on Monday.
358246457792401408 Jul 19 11:26 @arneelof Check http://genesilico.pl/ for all tools that are presented by Janusz #ismbeccb
358247848002850817 Jul 19 11:31 @arneelof Check poster number 19 about rna interactions #3dsig #ismbeccb
358249166536847360 Jul 19 11:37 @arneelof challenges in homology searches using hmmer3 (coiled coil are hard). Who is surprised? #3dsig #ismbeccb
358250249829101572 Jul 19 11:41 @andorsch Marco Punta on possible error modes of HMMER3 #3dsig #ISMBECCB
358250850231136256 Jul 19 11:43 @OHSUBCB @OHSUBCB Faculty Michael Mooney presents his work on polygenic effects #ISMBECCB in Berlin #MLSB http://fb.me/10WbvdsUT
358250998034206722 Jul 19 11:44 @WonderMixTape RT @OHSUBCB: @OHSUBCB Faculty Michael Mooney presents his work on polygenic effects #ISMBECCB in Berlin #MLSB http://fb.me/10WbvdsUT
358251894474420224 Jul 19 11:48 @BIOBASE BIOBASE will be at #ISMBECCB in booth 10! Come by for a demo and to meet our experts.
358252324386377729 Jul 19 11:49 @BIOBASE BIOBASE is hosting a lunch & learn workshop on July 22. You must register if you would like to attend #ISMBECCB
358253408773365761 Jul 19 11:54 @kiwi_k1 The QTLNetMiner poster won the best tool & resource poster price at #ismbeccb #netbiosig http://t.co/KX74URVD0E
358253496111341568 Jul 19 11:54 @WonderMixTape RT @luispedrocoelho: "You don't evaluate software quality by the impact factor of the journal it is published in" @CameronNeylon #ismbeccb #BOSC2013
358253530219425792 Jul 19 11:54 @favstar_pop RT @luispedrocoelho: "You don't evaluate software quality by the impact factor of the journal it is published in" @CameronNeylon #ismbeccb #BOSC2013
358253553288097792 Jul 19 11:54 @sebhtml RT @luispedrocoelho: "You don't evaluate software quality by the impact factor of the journal it is published in" @CameronNeylon #ismbeccb #BOSC2013
358254295990677504 Jul 19 11:57 @bwreijmerink RT @GenaliceDNA: Excellent performance data GENALICE MAP presented at HiTSeq 2013 meeting in Berlin: http://bit.ly/1aXEDHw #ismbeccb #bioinformatics #ngs
358254642536251392 Jul 19 11:58 @andorsch Emily Tai - on template free modeling in CASP10 #3dsig #ISMBECCB
358254896568471552 Jul 19 11:59 @arneelof final talk of first day of #3dsig at #ismbeccb about casp ten evaluation of new fold category. Another talk I already heard.
358254985408028672 Jul 19 12:00 @arneelof How to improve #3dsig at #ismbeccb?
358255959552323584 Jul 19 12:04 @avinashtn RT @larsjuhljensen: Most hereditary diseases are manifested in only one or two tissues #NetBioSig #ISMBECCB
358255980297351168 Jul 19 12:04 @avinashtn RT @larsjuhljensen: Many disease genes are not tissue specific, but have tissue specific interaction partners #NetBioSig #ISMBECCB
358258021283012608 Jul 19 12:12 @GenomeAnalysis RT @mcaccamo: Deserted bioinformatics offices at @GenomeAnalysis - it must be #ISMBECCB time! Looking forward to joining ISMB on Monday.
358258115172909056 Jul 19 12:12 @andorsch Template free modeling is still hard. Best group got 4 out of 19 right #3dsig #ISMBECCB
358258729210220546 Jul 19 12:15 @arneelof We were ranked number 3 in the free modeling assessment. Perhaps worth writing paper about it. Guess not too many other to write. #ismbeccb
358261814192119809 Jul 19 12:27 @PLOSCompBiol Looking forward to seeing you at #ismbeccb! Come meet the @PLOSCompBiol editors @ Booth13 Jul 21-23. Find out more: http://www.plos.org/computational-biology-news/
358274512162283520 Jul 19 13:17 @gray_alasdair Poster on the use of scientific lenses in @Open_PHACTS at #ISMBECCB by @team_myGrid http://t.co/eKmCl4DFkl
358315075922173953 Jul 19 15:59 @lenovere I will attend #ismbeccb from Sunday morning. Looking forward to see you all there.
358330572084482048 Jul 19 17:00 @zetieum RT @luispedrocoelho: "You don't evaluate software quality by the impact factor of the journal it is published in" @CameronNeylon #ismbeccb #BOSC2013
358332951568056320 Jul 19 17:10 @xanderpico RT @kiwi_k1: The QTLNetMiner poster won the best tool & resource poster price at #ismbeccb #netbiosig http://t.co/KX74URVD0E
358339440302764032 Jul 19 17:35 @sjcockell and so to Berlin and #ismbeccb tomorrow - be sure to mute the hashtag if you couldn't care less ;)
358340188407201792 Jul 19 17:38 @GigaScience New in GigaBlog: GigaBirthday at ISMB http://blogs.biomedcentral.com/gigablog/2013/07/19/gigabirthday-at-ismb/ #ISMBECCB
358342775361646593 Jul 19 17:49 @rtraborn Enjoying some late-night work in Mitte. #ismbeccb folk looking for a good stop to get a drink/free internet should check out St. Oberlitz
358344811415625728 Jul 19 17:57 @fiamh RT @rtraborn: Enjoying some late-night work in Mitte. #ismbeccb folk looking for a good stop to get a drink/free internet should check out St. Oberlitz
358347288063655936 Jul 19 18:07 @AidanBudd RT @larsjuhljensen: Open Access: Do Not Enter #OpenAccess #ISMBECCB http://t.co/SQ2iWVHnJZ
358348383397752832 Jul 19 18:11 @JohnMHancock RT @AidanBudd: RT @larsjuhljensen: Open Access: Do Not Enter #OpenAccess #ISMBECCB http://t.co/SQ2iWVHnJZ
358349949940936704 Jul 19 18:17 @bffo I actually thought you were older! Happy Birthday! RT @GigaScience: New in GigaBlog: GigaBirthday at ISMB http://blogs.biomedcentral.com/gigablog/2013/07/19/gigabirthday-at-ismb/ #ISMBECCB
358351693932539905 Jul 19 18:24 @mattjhodgkinson If you're going to the ISMB/ECCB meeting in Berlin, you'll get to meet my PLOS ONE colleague Christna Chap http://blogs.plos.org/everyone/2013/07/09/meet-plos-one-at-ismbeccb-2013-in-berlin/ #ISMBECCB
358353615796588544 Jul 19 18:32 @JChrisPires RT @pedrobeltrao: A lot of people in Berlin already for ISMB/ECCB http://www.iscb.org/ismbeccb2013 I am going tomorrow #ISMBECCB
358354054797209600 Jul 19 18:33 @AidanBudd Quickly spot myself in the photo ie guy with large bald patch. Yay. MT @VickySchneiderG: discussing #GOBLET #ISMBECCB http://t.co/30XRjDj7j2
358357160142450688 Jul 19 18:46 @kastacholamine This is great. RT @AidanBudd @larsjuhljensen: Open Access: Do Not Enter #OpenAccess #ISMBECCB http://t.co/3A8GNJMbJP
358362194121338880 Jul 19 19:06 @BUbioinfo Have an amazing weekend everyone! Stay tuned for some tweets from #ISMBECCB Sun - Tue.
358379850731905024 Jul 19 20:16 @yaydinson RT @Chris_Evelo: RT @iddux: I've just been informed that the official tag for ISMB 2013 is #ISMBECCB. If you use another tag, we won't visit your poster :)
358382075100925952 Jul 19 20:25 @yaydinson Look forward to catch up with new and folks at #ISMBECCB. Our posters will be up on Sunday morning till Monday. @GENformatik @METUSNP
358382185663180800 Jul 19 20:25 @ayhanserkans RT @yaydinson: Look forward to catch up with new and folks at #ISMBECCB. Our posters will be up on Sunday morning till Monday. @GENformatik @METUSNP
358461629500882944 Jul 20 01:41 @i_am_kilpatrick Really looking forward to #RegGenSIG meeting today at #ISMBECCB!
358464980540461056 Jul 20 01:54 @JonathanCFuller RT @AidanBudd: RT @larsjuhljensen: Open Access: Do Not Enter #OpenAccess #ISMBECCB http://t.co/SQ2iWVHnJZ
358470856332148737 Jul 20 02:18 @GigaScience Torn at #ISMBECCB today between the #usegalaxy talks in #BOSC2013 & the great #AFP13 lineup (see our series: http://blogs.biomedcentral.com/gigablog/2013/07/01/automated-function-prediction-call-for-papers-for-a-special-series/)
358473318317715456 Jul 20 02:27 @santoshnilla RT @bffo: classic picture! RT @larsjuhljensen: Open Access: Do Not Enter #OpenAccess #ISMBECCB http://t.co/2INHVSKkM7
358473697956331520 Jul 20 02:29 @nskunca Attending the Automatic Function prediction SIG. Looking forward! #ismbeccb
358473755510587392 Jul 20 02:29 @yaydinson Look forward to catch up with new and folks at #ISMBECCB. Our posters 55 63 will be up on Sunday morning till Monday @GENformatik @METUSNP
358474432353804289 Jul 20 02:32 @METUSNP RT @yaydinson: Look forward to catch up with new and folks at #ISMBECCB. Our posters 55 63 will be up on Sunday morning till Monday @GENformatik @METUSNP
358478059516993536 Jul 20 02:46 @bmcmatt RT @GigaScience: Torn at #ISMBECCB today between the #usegalaxy talks in #BOSC2013 & the great #AFP13 lineup (see our series: http://twitter.com/isaachmzEpuhrX2)
358480727555321856 Jul 20 02:57 @arvestad On my way to #ismbeccb Dont start without me.
358481787443363840 Jul 20 03:01 @laxvid #ISMBECCB #HiTSeq2013 Steve Brenner on Critical Assessment of Genome Interpretation 2011 and 2013 - I will tweet if I find these interesting
358483678869344256 Jul 20 03:09 @jaumebp Second day of the #mlsb workshop at #ISMBECCB 1st talk on modelling complex phenotypes by Sayan Mukherjee. Lots of equations :p
358486221997088768 Jul 20 03:19 @ISMBECCB SIGs, Satellite & Junior PI meetings, and Opening Reception with Sponsors & Exhibitors, it's a great day at #ismbeccb!
358486909187653632 Jul 20 03:21 @luispedrocoelho "One thing I've heard a lot and don't believe is 'don't reinvent the wheel'" S. Eddy #BOSC2013 #ISMBECCB
358487251778416640 Jul 20 03:23 @laxvid #ISMBECCB @SB making good case for CAGI https://genomeinterpretation.org/
358487616926134272 Jul 20 03:24 @DNADigest RT @luispedrocoelho: "One thing I've heard a lot and don't believe is 'don't reinvent the wheel'" S. Eddy #BOSC2013 #ISMBECCB
358487925773709312 Jul 20 03:25 @sk_ap I. Kulakovskiy presents diChIPMunk, still one of my favorably named tools. #ismbeccb #reggensig
358488578399019008 Jul 20 03:28 @frank_foerster Junior PI meeting started with a lot of interesting people #ismbeccb
358488820666212353 Jul 20 03:29 @arneelof Interactome3d with a nice website is presented at #ismbeccb
358489468300308480 Jul 20 03:32 @DNADigest Sean Eddy: It _is_ worth the time and effort to engineer useful tools. #BOSC2013 #ISMBECCB
358489672575500289 Jul 20 03:32 @OBF_BOSC RT @DNADigest: Sean Eddy: It _is_ worth the time and effort to engineer useful tools. #BOSC2013 #ISMBECCB
358489759221809152 Jul 20 03:33 @iddux #AFP13 at Hall 4 #ISMBECCB. Now: Valentini discussing using Big Graph analysis. http://homes.di.unimi.it/~valenti/
358490252836483073 Jul 20 03:35 @dasmoth RT @DNADigest: Sean Eddy: It _is_ worth the time and effort to engineer useful tools. #BOSC2013 #ISMBECCB
358490346558619648 Jul 20 03:35 @iddux RT @GigaScience: Torn at #ISMBECCB today between the #usegalaxy talks in #BOSC2013 & the great #AFP13 lineup (see our series: http://twitter.com/isaachmzEpuhrX2)
358490403093225472 Jul 20 03:35 @ProfLHunter Peter Robinson up at #BioOntologiesSIG talking about phenotype description. #ISMBECCB #ISMBECCB2013 #ISMB2013 #TooManyHashTags
358490408084852736 Jul 20 03:35 @pjacock RT @DNADigest: Sean Eddy: It _is_ worth the time and effort to engineer useful tools. #BOSC2013 #ISMBECCB
358490905717649408 Jul 20 03:37 @marinkazitnik It is a miRNA sponge! N. R. Keynote at #CAMDA #ISMBECCB
358491231779057664 Jul 20 03:39 @GenomeBiology RT @GigaScience: Torn at #ISMBECCB today between the #usegalaxy talks in #BOSC2013 & the great #AFP13 lineup (see our series: http://twitter.com/isaachmzEpuhrX2)
358491611921416192 Jul 20 03:40 @ssatta RT @DNADigest: Sean Eddy: It _is_ worth the time and effort to engineer useful tools. #BOSC2013 #ISMBECCB
358492425871831040 Jul 20 03:43 @DNADigest Sean Eddy: Why the fuss about 'open' today? It is more about the mechanisms than the principle. The principle is not new #BOSC2013 #ISMBECCB
358492951565332480 Jul 20 03:45 @Bioinfomatic RT @GigaScience: Torn at #ISMBECCB today between the #usegalaxy talks in #BOSC2013 & the great #AFP13 lineup (see our series: http://twitter.com/isaachmzEpuhrX2)
358493129424388096 Jul 20 03:46 @Alfons_Valencia Second day at the ISCB BoD. Interesting ideas, discussions and challenges ... but missing the SIGs and tutorials :-(( #ISMBECCB
358493176920670208 Jul 20 03:46 @GenomeBiology #ISMBECCB Sean Eddy - Encode style experiments on single neuron cells.
358493370341408768 Jul 20 03:47 @Bioinfomatic RT @GenomeBiology: #ISMBECCB Sean Eddy - Encode style experiments on single neuron cells.
358493863331119104 Jul 20 03:49 @arneelof Talk about non natural amino acids at #3dsig and new modeling tools #ismbeccb
358494059372879873 Jul 20 03:50 @rtraborn As someone who made a similar transition to CompBio, I'm heartened to learn that Sean Eddy got his start as a wet-lab biologist. #ISMBECCB
358494066943606784 Jul 20 03:50 @ProfLHunter Robinson's Exomiser (http://www.sanger.ac.uk/resources/databases/exomiser/) calls pathogenicity of exome variants, along with mapping to mouse phenotypes. #ISMBECCB
358494169032949760 Jul 20 03:50 @GenomeBiology It's ok for computational biologists to build up trusted methods that are not shared with others- SE. #ISMBECCB
358494925379219457 Jul 20 03:53 @arneelof If you think there is too little talks about structure prediction at #3dsig see me at poster 20 at the poster session #ismbeccb
358495074126012416 Jul 20 03:54 @luispedrocoelho "I don't think of this as interdisciplinary, data analysis is part of the discipline [of Biology]" S. Eddy #BOSC2013 #ISMBECCB
358495095579869186 Jul 20 03:54 @GenomeBiology Lincoln steins great 'bioinformatics gone by 2012' review mentioned. But not cited. Tsk! #ISMBECCB
358495524762447872 Jul 20 03:56 @glyn_dk RT @DNADigest: Sean Eddy: It _is_ worth the time and effort to engineer useful tools. #BOSC2013 #ISMBECCB
358496075230883840 Jul 20 03:58 @larsjuhljensen Interesting presentation on drug similarity by Maria Kissa https://docs.google.com/viewer?a=v&pid=sites&srcid=ZGVmYXVsdGRvbWFpbnxiaW9saW5rc2lnMjAxM3xneDozYTE5NjdjMzdiMDlhNGM1 #BioLink #ISMBECCB
358496137600188416 Jul 20 03:58 @jonathancairns #ISMBECCB #RegGen Erik van Nimwegen's ISMARA tool looks at how expression regresses against motif activity.
358496314381705216 Jul 20 03:59 @GigaScience Gutted to be missing probably the best titled talk of #ISMBECCB by Christos Ouzounis "We still haz a job: genome annotashuns" #AFP13
358496399153184768 Jul 20 03:59 @DNADigest RT @larsjuhljensen: Open Access: Do Not Enter #OpenAccess #ISMBECCB http://t.co/T4Uy3RP8DB
358496724026789889 Jul 20 04:00 @mwilsonsayres Really? RT @GenomeBiology It's ok for computational biologists to build up trusted methods that are not shared with others- SE. #ISMBECCB
358496983389962240 Jul 20 04:01 @mwilsonsayres RT @DNADigest: Sean Eddy: It _is_ worth the time and effort to engineer useful tools. #BOSC2013 #ISMBECCB
358497700112646144 Jul 20 04:04 @luispedrocoelho "Tools are evaluated against databases which themselves consist (to a large extent) of the output of other tools" S Eddy #BOSC2013 #ISMBECCB
358498403396759552 Jul 20 04:07 @jandot Anyone from #cytoscape at #ISMBECCB ? Want to talk to you before my talk on Tuesday on #dataviz
358498560033042432 Jul 20 04:08 @arneelof Next talk in #3dsig about who is publishing with whom in structural bioinformatics #ismbeccb if you published with a keynote see poster
358498776379437056 Jul 20 04:09 @larsjuhljensen Nigam Shah: making sense of clinical text https://docs.google.com/viewer?a=v&pid=sites&srcid=ZGVmYXVsdGRvbWFpbnxiaW9saW5rc2lnMjAxM3xneDo2M2U5NTc2NjJiYjBkZDc5 #BioLink #ISMBECCB
358498909376626688 Jul 20 04:09 @jonathancairns #ISMBECCB #RegGen Amused by how many speakers are using the term "junk DNA" then adding an apology, including the word "ENCODE".
358499551050596353 Jul 20 04:12 @iddux Ouzounis: 250 protiens are annotated as "putaive". Many are homologous. #AFP13 #ISMBECCB http://www.ncbi.nlm.nih.gov/protein/?term=putaive
358499664636551168 Jul 20 04:12 @pjacock #BOSC2013 finished all their coffee at #ISMBECCB yesterday, Nomi has asked them to provide more today. Geeks and their caffeine ;)
358499740419227648 Jul 20 04:12 @SCEdmunds @mcdawg its only a SIG (satellite) of #ISMBECCB, but a lot of people (esp open-source geeks) like it better than the main meeting
358499815468310529 Jul 20 04:13 @danmaclean RT @DNADigest: Sean Eddy: It _is_ worth the time and effort to engineer useful tools. #BOSC2013 #ISMBECCB
358499951401123842 Jul 20 04:13 @arneelof Structural activity similarity between DNA small molecules are in the behold of the beholder #ismbeccb
358499996913905664 Jul 20 04:13 @arneelof RT @jonathancairns: #ISMBECCB #RegGen Amused by how many speakers are using the term "junk DNA" then adding an apology, including the word "ENCODE".
358500113121308672 Jul 20 04:14 @frank_foerster #ISMBECCB #JPI Dr. Mikhail Spivakov @mikhailspivakov is talking about functional genomic and population genetic analyses
358500154422202370 Jul 20 04:14 @iddux Ouzounis shows this hilarious cartoon: http://www.genomicglossaries.com/images/shenemangenome.gif #AFP13 #ISMBECCB
358500235045109763 Jul 20 04:14 @arneelof "@pjacock: #3dsig finished all their coffee at #ISMBECCB yesterday Geeks and their caffeine ;)"
358500335926513664 Jul 20 04:15 @McDawg RT @bffo: classic picture! RT @larsjuhljensen: Open Access: Do Not Enter #OpenAccess #ISMBECCB http://t.co/2INHVSKkM7
358500370525335552 Jul 20 04:15 @rtraborn RT @jonathancairns: #ISMBECCB #RegGen Amused by how many speakers are using the term "junk DNA" then adding an apology, including the word "ENCODE".
358500662662807553 Jul 20 04:16 @arneelof Great talk about structure addiction in #3dsig award talk by sir Tom Blundell #ismbeccb
358500866296254464 Jul 20 04:17 @rtraborn For people at #ISMBECCB w/o data plans in Germany, I've been using the free 'Berlin Subway' app to get around on the U/S-Bahn- useful that.
358500878744956929 Jul 20 04:17 @trished “@bffo: classic picture! RT @larsjuhljensen: Open Access: Do Not Enter #OpenAccess #ISMBECCB http://t.co/fPfGQJrIEJ”:-)
358501733816737792 Jul 20 04:20 @laxvid AK #ISMBECCB PALMapper fully variant aware alignments
358501961974284289 Jul 20 04:21 @AliciaOshlack Check out our poster at #ISMBECCB on Sunday:N089. Differential expression for denovo assembled transcriptomes. https://code.google.com/p/corset-project/
358502146687246336 Jul 20 04:22 @nskunca A cool talk by Christos Ouzounis about the open questions in genome annotations at AFP SIG. And catz. :) #ISMBECCB
358502657243099138 Jul 20 04:24 @arneelof If we all want open access why do we then not stream all talks from #ismbeccb directly to the Web #OpenAccess
358503480295563264 Jul 20 04:27 @jonathancairns #ISMBECCB #RegGen Fascinating stuff from Alan Moses. Plants have v basic regulatory mechanisms, yet many cell types.
358503711959969792 Jul 20 04:28 @alastair_kerr RT @pjacock: #BOSC2013 finished all their coffee at #ISMBECCB yesterday, Nomi has asked them to provide more today. Geeks and their caffeine ;)
358503776883580928 Jul 20 04:28 @DNADigest RT @pjacock: #BOSC2013 finished all their coffee at #ISMBECCB yesterday, Nomi has asked them to provide more today. Geeks and their caffeine ;)
358504662250422272 Jul 20 04:32 @satagopam Theodore Alexandrov is introducing “About My Lab”, a new series of publications at PLoS Computational #ISMBECCB #JPI2013
358504954371129344 Jul 20 04:33 @kiwi_k1 I would love to see some #cagi challenges https://genomeinterpretation.org/ specific for the plant community #ismbeccb #hitseq
358505004032094208 Jul 20 04:33 @arneelof RT @satagopam: Theodore Alexandrov is introducing “About My Lab”, a new series of publications at PLoS Computational #ISMBECCB #JPI2013
358505638944448512 Jul 20 04:36 @satagopam PI - need to take total responsibility, solve the problems, you are manager of projects, time #ISMBECCB #JPI2013
358506556851109888 Jul 20 04:39 @satagopam PI - good communicator, listen to students, cooperate the students #ISMBECCB #JPI2013
358507920738095104 Jul 20 04:45 @oliveacid RT @arneelof: Structural activity similarity between DNA small molecules are in the behold of the beholder #ismbeccb
358507930686988288 Jul 20 04:45 @bffo BMC has removed the offensive banner from their booth! MT @larsjuhljensen: #OpenAccess: Do Not Enter #ISMBECCB http://t.co/2INHVSKkM7
358507958176456704 Jul 20 04:45 @satagopam Theodore says - PI need to good team builder, motivate, stimulate creativity, empower the team, acknowledge, create trust #ISMBECCB #JPI2013
358508054288941056 Jul 20 04:45 @McDawg RT @bffo: BMC has removed the offensive banner from their booth! MT @larsjuhljensen: #OpenAccess: Do Not Enter #ISMBECCB http://t.co/2INHVSKkM7
358508603201691649 Jul 20 04:48 @cdessimoz If you are at #ISMBECCB, consider attending @nskunca’s talk about function prediction and the open world assumption today at 11.35am #AFP13!
358508761872220160 Jul 20 04:48 @OBF_BOSC RT @pjacock: #BOSC2013 finished all their coffee at #ISMBECCB yesterday, Nomi has asked them to provide more today. Geeks and their caffeine ;)
358508988398596096 Jul 20 04:49 @marinkazitnik RT @iddux: Ouzounis shows this hilarious cartoon: http://www.genomicglossaries.com/images/shenemangenome.gif #AFP13 #ISMBECCB
358509465680625665 Jul 20 04:51 @bffo Enis Afgan on BioBlend, enabling pipelines: a galaxy wrapper http://www.ncbi.nlm.nih.gov/pubmed/23630176 #ISMBECCB #BOSC2013
358509741019901952 Jul 20 04:52 @DNADigest The @DNAdigest poster is still up until 4pm today. Look for the #BOSC2013 poster boards at #ISMBECCB
358511070652420096 Jul 20 04:57 @VickySchneiderG RT @iddux: Ouzounis shows this hilarious cartoon: http://www.genomicglossaries.com/images/shenemangenome.gif #AFP13 #ISMBECCB
358511254715252736 Jul 20 04:58 @AndreaCiolfi RT @GenomeBiology: It's ok for computational biologists to build up trusted methods that are not shared with others- SE. #ISMBECCB
358511813417107456 Jul 20 05:00 @satagopam PI is a founder, researcher, scientific director, manager; management skills are learned-by-doing #ISMBECCB #JPI2013
358512132041613317 Jul 20 05:02 @satagopam Philip Bourne introduce about my lab is - an informal interview with a PI, will be published in PLoS #ISMBECCB #JPI2013
358512426058137600 Jul 20 05:03 @pjacock Tweeting photos during #BOSC2013 is frustrating, seem the #ISMBECCB #wifi struggles - thus requires retries and delayed tweet posting :(
358512771941404672 Jul 20 05:04 @JonathanCFuller @JonathanCFuller also available at #ISMBECCB
358512899657969666 Jul 20 05:05 @satagopam Philip Bourne says, one can learn from other PIs this is the main reason why we are started this publication series. #ISMBECCB #JPI2013
358513542359560196 Jul 20 05:07 @arneelof #ismbeccb Michael J. E. Stern berg talking about SNPs at protein protein interfaces.
358514351981858816 Jul 20 05:10 @WonderMixTape deStruct's goal is to estimate prevalence of given rearrangement in given tumor sample #ISMBECCB #HiTSEQ
358514609755394049 Jul 20 05:11 @arneelof All SNPs do not have the same probability to cause disease 21419 diseases 36835 polymorphism in db #ismbeccb
358514790781558784 Jul 20 05:12 @laxvid #ISMBECCB #wifi struggle is indeed frustrating....
358514801560915968 Jul 20 05:12 @WonderMixTape Utilizes genome graphs; annotate graph w/ fractional copies - potential issue of over fitting due to spurious cycles #ISMBECCB #HiTSEQ
358515255665631232 Jul 20 05:14 @arneelof Disease resistant domains are resistant because they can accommodate mutations #ismbeccb
358515828821471234 Jul 20 05:16 @WonderMixTape With balanced rearrangements - predictions only marginally better than using read depth #ISMBECCB #HiTSEQ
358516005469163520 Jul 20 05:17 @kiwi_k1 RT @iddux: Ouzounis shows this hilarious cartoon: http://www.genomicglossaries.com/images/shenemangenome.gif #AFP13 #ISMBECCB
358516238441394177 Jul 20 05:18 @jonathancairns #ISMBECCB #RegGen Useful vocab word from Struan Grant: "Apophenia - seeing patterns in meaningless data"
358516548719226880 Jul 20 05:19 @arneelof Stenberg "when you develop algorithms you always do better than in blind tests" #ismbeccb
358516575194058752 Jul 20 05:19 @mjskwark RT @arneelof: "@pjacock: #3dsig finished all their coffee at #ISMBECCB yesterday Geeks and their caffeine ;)"
358516622106963969 Jul 20 05:19 @marinkazitnik RT @jonathancairns: #ISMBECCB #RegGen Useful vocab word from Struan Grant: "Apophenia - seeing patterns in meaningless data"
358517077159583745 Jul 20 05:21 @rtraborn My key to not sleeping much during conferences: open blinds. That summer sun in Berlin rises early, forcing me to do the same! #ismbeccb
358517402339778560 Jul 20 05:23 @AliciaOshlack RT @jonathancairns: #ISMBECCB #RegGen Useful vocab word from Struan Grant: "Apophenia - seeing patterns in meaningless data"
358517566903685120 Jul 20 05:23 @DNADigest RT @WonderMixTape: deStruct's goal is to estimate prevalence of given rearrangement in given tumor sample #ISMBECCB #HiTSEQ
358517754833276929 Jul 20 05:24 @WonderMixTape deStruct website: http://compbio.bccrc.ca #ISMBECCB #HiTSeq
358517808855912448 Jul 20 05:24 @jonathancairns #ISMBECCB #RegGen Terrific talk from Struan Broad on the gene TCF7L2, a surprising genetic link between diabetes and colorectal cancer
358517863512309760 Jul 20 05:24 @easduncan RT @trished: “@bffo: classic picture! RT @larsjuhljensen: Open Access: Do Not Enter #OpenAccess #ISMBECCB http://t.co/fPfGQJrIEJ”:-)
358517898597244930 Jul 20 05:25 @i_am_kilpatrick Nice talk on possible roles of PARP-1 in diabetes/cancer by Struan Grant #RegGenSIG #ISMBECCB
358518196690620417 Jul 20 05:26 @arneelof #ismbeccb 088 ANALYSIS AND PREDICTION OF THE BIOCHEMICAL EFFECTS OF MISSENSE MUTATIONS USING HOMOLOGY MODELING Andrew bordner
358518446797361152 Jul 20 05:27 @DNADigest RT @WonderMixTape: With balanced rearrangements - predictions only marginally better than using read depth #ISMBECCB #HiTSEQ
358518475784216576 Jul 20 05:27 @DNADigest RT @WonderMixTape: deStruct website: http://compbio.bccrc.ca #ISMBECCB #HiTSeq
358518778436403200 Jul 20 05:28 @arneelof "@rtraborn: My key to not sleeping much during conferences: open blinds." but then you sleep during talks O:-) #ismbeccb
358519288530870272 Jul 20 05:30 @WonderMixTape @quaidmorris inferring heterogeneous population from NGS freq data; targeted seq for deep coverage #ISMBECCB #HiTSeq
358519410555764736 Jul 20 05:31 @satagopam MyLab series will be launched Nov 2013 #ISMBECCB #JPI2013
358519583054888960 Jul 20 05:31 @arneelof More disease causing binding sites in binding sites than on other sites #ismbeccb
358519586255151104 Jul 20 05:31 @WonderMixTape Original Method: PyClone (Shah et al Nature 2012) http://compbio.bccrc.ca/software/pyclone/ #ISMBECCB #HiTSeq
358520014749839360 Jul 20 05:33 @iddux RT @cdessimoz: If you are at #ISMBECCB, consider attending @nskunca’s talk about function prediction and the open world assumption today at 11.35am #AFP13!
358520179312951298 Jul 20 05:34 @WonderMixTape Model assumptions for tumor evolution; : SNPs that occur in ancestral lineage to another SNP will have higher freq #ISMBECCB #HiTSeq
358520331511668736 Jul 20 05:34 @frank_foerster #ISMBECCB #JPI Gang Fang talks about third generation sequencing of DNA modifications
358520407566983170 Jul 20 05:35 @i_am_kilpatrick Ivan Kulakovskiy's talk on constructing dinucleotide models of TF binding sites (w/ diChIPMunk) also v interesting. #RegGenSIG #ISMBECCB
358520414344978432 Jul 20 05:35 @WonderMixTape Modification of PyClone: Infer Tree Structure and subclonal lineage frequencies #ISMBECCB #HiTSeq
358520610634620928 Jul 20 05:35 @iddux Rachael Huntley from @emblebi talking about misconceptions of using GO #ISMBECCB #AFP13
358520690732826624 Jul 20 05:36 @arneelof Essentially no clusters in 3d aning dbSNP but many among disease causing SNPs #ismbeccb
358521367915798528 Jul 20 05:38 @frank_foerster #ISMBECCB #JPI Theodore Alexandrov, Philip Bourne, and Olga Vitek talked about the series "About My Lab" in @PLOSCompBiol starting in Nov.
358521410815148032 Jul 20 05:39 @i_am_kilpatrick RT @jonathancairns: #ISMBECCB #RegGen Useful vocab word from Struan Grant: "Apophenia - seeing patterns in meaningless data"
358521548627390464 Jul 20 05:39 @WonderMixTape PhyloSub Bayesian Model; Prior: Nonparametric tree-structured stick breaking process (Adams, NIPS 2010) #ISMBECCB #HITSeq
358522408124170241 Jul 20 05:42 @bffo Gunnar Ratsch on Oqtans for #RNA-Seq Data analysis http://www.oqtans.org/ #usegalaxy #ISMBECCB #BOSC2013
358522618451738624 Jul 20 05:43 @WonderMixTape Phylosub Reference: http://arxiv.org/abs/1210.3384 #ISMBECCB #HiTSeq
358524107203162112 Jul 20 05:49 @iddux @nskunca is talking about the protein annotations we do not know at #AFP13 #ISMBECCB
358524226619187201 Jul 20 05:50 @LonsBio #ISMBECCB seems as good a time as any to get this twitter account going!
358524404956807168 Jul 20 05:50 @WonderMixTape James Sun from @FoundationATCG Determining Somatic vs germline mutation without matched normal sample #ISMBECCB #HiTSeq #ClinicalOmics
358524411604766721 Jul 20 05:50 @arneelof #gendercount at #3dsig at #ismbeccb keynote 1/9 women, selected speakers 4/20, participants (estimated) 10%. Ok?
358524546141257728 Jul 20 05:51 @sk_ap apparently schedule has changed and I missed a talk :-( #camda, #ismbeccb
358524554387271680 Jul 20 05:51 @iddux @nskunca: many protein annotations are updated over time. When we assess AFP methods, how do we determine false positives #AFP13 #ISMBECCB
358524637484818432 Jul 20 05:51 @WonderMixTape @FoundationATCG 's NGS-based profiling Test via @illumina 14-17 days turnaround time #HiTSeq #ISMBECCB
358524774517325824 Jul 20 05:52 @DNADigest RT @WonderMixTape: @FoundationATCG 's NGS-based profiling Test via @illumina 14-17 days turnaround time #HiTSeq #ISMBECCB
358524969849864192 Jul 20 05:53 @larsjuhljensen RT @bffo: BMC has removed the offensive banner from their booth! MT @larsjuhljensen: #OpenAccess: Do Not Enter #ISMBECCB http://t.co/2INHVSKkM7
358525080349188096 Jul 20 05:53 @markwassy RT @GigaScience: Torn at #ISMBECCB today between the #usegalaxy talks in #BOSC2013 & the great #AFP13 lineup (see our series: http://twitter.com/isaachmzEpuhrX2)
358525268933083136 Jul 20 05:54 @jonathancairns #ISMBECCB #RegGen Felicia Ng is regressing exp changes against ChIP counts in peak regions, using spline-based "generalized additive model".
358525810707152896 Jul 20 05:56 @larsjuhljensen My BioLink keynote: http://www.slideshare.net/larsjuhljensen/the-pragmatic-text-miner-from-literature-to-electronic-health-records #BioLink #ISMBECCB
358525830508462080 Jul 20 05:56 @arneelof From structure to evolution of mutations using a fitness landscape in hiv proteases #ismbeccb
358525979058110464 Jul 20 05:57 @WonderMixTape Pipeline I: 1. Seq to high depth median >500X ; 2. fit CN model for entire genome CGH-like log ration profile of sample #ISMBECCB #HiTSeq
358526359041085440 Jul 20 05:58 @WonderMixTape Pipeline II: 3. Use model fit to assess LOH; 4. use model fit to assess diff in allele freq between germline & somatic; #ISMBECCB #HiTSeq
358526456458387456 Jul 20 05:59 @arneelof RT @larsjuhljensen: My BioLink keynote: http://www.slideshare.net/larsjuhljensen/the-pragmatic-text-miner-from-literature-to-electronic-health-records #BioLink #ISMBECCB
358526628894224385 Jul 20 05:59 @WonderMixTape Need sufficiently admixed sample to differentiate somatic vs germline #ISMBECCB #HiTSeq
358526701757669376 Jul 20 06:00 @bffo VS availability of Oqtans on Amazon at this AMI: ami-5e839a37 #usegalaxy #BOSC2013 #ISMBECCB http://t.co/Nzwzc0gzQu
358526932708622336 Jul 20 06:00 @WonderMixTape Pipeline III: 5. Within somatic, assess differences to differentiate clonal vs subclonal #HiTSeq #ISMBECCB
358527078464892928 Jul 20 06:01 @frank_foerster #ISMBECCB #JPI Current topic: Systems Biology methods for image analysis in development and disease by Dr. Luis M Escudero
358527250800455682 Jul 20 06:02 @arneelof Soon poster session at #3dsig #ismbeccb
358528277818122241 Jul 20 06:06 @fgibson RT @bffo: BMC has removed the offensive banner from their booth! MT @larsjuhljensen: #OpenAccess: Do Not Enter #ISMBECCB http://t.co/2INHVSKkM7
358528303105179649 Jul 20 06:06 @arneelof Nir Ben Tal claims that he will give a cool talk so that I should listen to him and not tweet #ismbeccb
358528334424047616 Jul 20 06:06 @jamesmalone Jyotishman Pathak keynote #ISMBECCB #bioontology "sem web community need to forget killer app and focus on small useful apps." Quite.
358528703103766528 Jul 20 06:07 @DNADigest Using admixed sample and deep sequencing @FoundationATCG determines both germline and somatic variants w/o matched normal #HiTSeq #ISMBECCB
358528897773600768 Jul 20 06:08 @arneelof It was an interesting presentation but the wrong one according to Nir. The slide was made by the computer #ismbeccb
358529049225732096 Jul 20 06:09 @kastacholamine Obviously needs an RT @arneelof: Nir Ben Tal claims that he will give a cool talk so that I should listen to him and not tweet #ismbeccb
358529249944154112 Jul 20 06:10 @arneelof Influenza can mutations by shift by combining genetic information from two strains #ismbeccb
358529370710753281 Jul 20 06:10 @WonderMixTape Gavin Ha - subclonal CN inference from whole genome sequencing #HiTSEQ #ISMBECCB
358529940435648512 Jul 20 06:12 @i_am_kilpatrick Vitruvian mouse! #RegGenSIG #ISMBECCB
358530723289894913 Jul 20 06:16 @iddux Noah Youngs from @nyuniversity is talking about how to generate negative examples for machine learning in #AFP13 #ISMBECCB
358530954232475648 Jul 20 06:16 @EBIgoldman RT @cdessimoz: If at #ISMBECCB consider attending @nskunca’s talk: function prediction & the open world assumption today, 11.35am #AFP13!
358531475727065090 Jul 20 06:18 @frank_foerster Hey @rfschwarz, yes I am at the #ismbeccb. Sounds like we will have a lot of fun :-)
358531643495034880 Jul 20 06:19 @WonderMixTape subclonal events share similar cellular prevelances - use of finite clustering #HiTSeq #ISMBECCB
358532293154992128 Jul 20 06:22 @soilandreyes #ResearchObject poster at #BOSC2013 #ISMBECCB Come see and meet @team_myGrid during lunch now! http://www.slideshare.net/soilandreyes/2013-0718bosc-2013myexperimentresearchobjectsposter-24242509 http://t.co/fEHYwemxFD
358532561108086784 Jul 20 06:23 @WonderMixTape @GavinHa #APOLLOH http://compbio.bccrc.ca/software/apolloh/ Note: talk was for APOLLOH 2 #HITSeq #ISMBECCB
358533310458249216 Jul 20 06:26 @arneelof Why do R149K in influenza haeomoglutanun? Close to an highly conserved surface patch. It is a dynamic hub! #ismbeccb
358533786490781697 Jul 20 06:28 @i_am_kilpatrick Nice to see a talk on prokaryotic regulation :) #RegGenSIG #ISMBECCB
358534223793106944 Jul 20 06:29 @WonderMixTape Kjong-Van Lehmann (Gunnar Rätsch's lab) Cancer Transcriptome variability #HitSeq #ISMBECCB
358534301014433792 Jul 20 06:30 @AidanBudd @konradfoerstner we do a wrkshp @ #ismbeccb trying to understand features of high-impact netwrks/communities of bioinformtns #ismbnetworking
358535176818667520 Jul 20 06:33 @NetCommBioinf RT @AidanBudd: @konradfoerstner we do a wrkshp @ #ismbeccb trying to understand features of high-impact netwrks/communities of bioinformtns #ismbnetworking
358535407547322368 Jul 20 06:34 @janhjensen RT @bffo: BMC has removed the offensive banner from their booth! MT @larsjuhljensen: #OpenAccess: Do Not Enter #ISMBECCB http://t.co/2INHVSKkM7
358535538384453632 Jul 20 06:35 @janhjensen RT @larsjuhljensen: Open Access: Do Not Enter #OpenAccess #ISMBECCB http://t.co/T4Uy3RP8DB
358535569061593089 Jul 20 06:35 @WonderMixTape Spladder - tool for quantifying splicing http://www.raetschlab.org:10080/fml-migrated/raetsch/suppl/spladder/ #HitSeq #ISMBECCB
358537166944600064 Jul 20 06:41 @i_am_kilpatrick Accessibility of genome for binding can vary: binding/no binding seen in same 10nt sequence! #RegGenSIG #ISMBECCB
358541787746406400 Jul 20 06:59 @i_am_kilpatrick #ISMBECCB poster is up! No.7 in #RegGenSIG area :)
358543452545359873 Jul 20 07:06 @NoWomenSpeakers RT @arneelof: #gendercount at #3dsig at #ismbeccb keynote 1/9 women, selected speakers 4/20, participants (estimated) 10%. Ok?
358543978502696960 Jul 20 07:08 @nlbigas Preparing my presentation for the workshop "Integrated Visualization and Computing for Biomedical Research" on Tuesday at #ISMBECCB
358546233654124545 Jul 20 07:17 @jonathancairns #ISMBECCB Convention centre is like Hogwarts. A sprawl of stairs everywhere; some magically become escalators when you walk into them.
358547392519352322 Jul 20 07:22 @JonathanCFuller Interested in #systemsbiology? @ #ismbeccb? Come and see my poster from now until 3pm, near room 14.2. #wikipathways #ChEMBL
358548423634866176 Jul 20 07:26 @iosefward RT @JonathanCFuller: Interested in #systemsbiology? @ #ismbeccb? Come and see my poster from now until 3pm, near room 14.2. #wikipathways #ChEMBL
358549535146389504 Jul 20 07:30 @jaumebp RT @jonathancairns: #ISMBECCB Convention centre is like Hogwarts. A sprawl of stairs everywhere; some magically become escalators when you walk into them.
358552656131784704 Jul 20 07:43 @rtraborn RT @jonathancairns: #ISMBECCB Convention centre is like Hogwarts. A sprawl of stairs everywhere; some magically become escalators when you walk into them.
358553628610527232 Jul 20 07:47 @Alexbateman1 Anna Tramontano talking about experience of CASP over the years at #AFP SIG at #ISMBECCB
358554174151081986 Jul 20 07:49 @rtraborn As the #PostENCODE workshop starts up, we're getting a pretty thorough pre-ENCODE Introduction. #ismbeccb
358554491571806208 Jul 20 07:50 @iddux Anna Tramontano talks about protein strucutre modeling formats in early CASP: in 1994, people sent in plastic models. #AFP13 #ISMBECCB
358554515655503872 Jul 20 07:50 @nskunca Anna Tramontano at AFP SIG talking about the CASP challenges that can be useful lessons for CAFA. #ISMBECCB
358554849861836800 Jul 20 07:51 @iddux Tramontano on assessing statistical differences between predictions. Is this perediction significantly better than that? #AFP13 #ISMBECCB
358555401433792512 Jul 20 07:54 @iddux Tramontano: "I'm not sure protein structure prediction has improved, but assessment statistics definitely have". #AFP13 #ISMBECCB
358555598956146691 Jul 20 07:54 @jonathancairns #ISMBECCB #RegGen Lovely series of vignettes from Ben Lehnen showing how important it is to think of expression as a function of time.
358555949595754499 Jul 20 07:56 @jonathancairns #ISMBECCB #RegGen In essence, an "eQTL" i.e. SNP -> +/- expression is a gross oversimplification. Regressing out time improves power.
358556182207676418 Jul 20 07:57 @SahaSurya RT @iddux: Tramontano: "I'm not sure protein structure prediction has improved, but assessment statistics definitely have". #AFP13 #ISMBECCB
358556261547122689 Jul 20 07:57 @jonathancairns #ISMBECCB #RegGen Plus, also see non-trivial behaviour, like SNPs inducing phase shifts in expression profiles
358556394934378496 Jul 20 07:58 @WonderMixTape RT @iddux: Tramontano: "I'm not sure protein structure prediction has improved, but assessment statistics definitely have". #AFP13 #ISMBECCB
358557535168512000 Jul 20 08:02 @WonderMixTape Alexandru Tomescu Novel Combinatorial Method for estimating transcript expression - finding bounded number of paths #ISMBECCB #HiTSEQ
358557793332117504 Jul 20 08:03 @rtraborn The #PostENCODE workshop comes with a 183p booklet of the presentation slides. Thankfully, I've been assured there will be no exam #ismbeccb
358557996520964096 Jul 20 08:04 @WonderMixTape Method: Traph (Transcripts in Graphs) http://www.cs.helsinki.fi/en/gsa/traph/ #ISMBECCB #HiTSeq
358558556070481920 Jul 20 08:06 @DNADigest Neat annotation functionality http://mygene.info public API to look up gene information #BOSC2013 #ISMBECCB
358558641680429056 Jul 20 08:06 @marinkazitnik Systematic sequencing errors - all these guys have the same mutations and go to the same sequencing center, very unlikely #CAMDA #ISMBECCB
358560183473029120 Jul 20 08:13 @rtraborn Pisano raises a good point about ENCODE's cell line selection: most were selected for practical, rather than biological, reasons. #ismbeccb
358561791279767552 Jul 20 08:19 @moorejh Great #bioinformatics & #genomics feed from #ISMBECCB. Thanks for all the great tweets!
358561905964621824 Jul 20 08:19 @frank_foerster #ISMBECCB #JPI Jean Peccoud is talking about running a lab like a business
358561956539539459 Jul 20 08:20 @EMBLorg Fancy a break from #ismbeccb info-overload? Feast your eyes on this beauty, based on http://itol.embl.de http://bit.ly/15PEuyV
358562658142138368 Jul 20 08:22 @gray_alasdair RT @luispedrocoelho: "a visualization is already an interpretation of the data, it may be wrong" #ismbeccb #BOSC2013
358562781492019201 Jul 20 08:23 @rtraborn Pisano: ENCODE is by no means complete: 'only' 147 cell types & >100 TFs. At present it is in a build-out phase, filling in gaps. #ismbeccb
358562881488818176 Jul 20 08:23 @gray_alasdair RT @soilandreyes: Significant #BOSC2013 and #ISMBECCB presence by @team_myGrid this year: http://www.mygrid.org.uk/2013/07/mygrid-and-taverna-at-ismb-2013-and-bosc-2013/ including keynote by @CaroleAnneGoble on Tue.
358563078788890624 Jul 20 08:24 @galaxyproject RT @bffo: VS availability of Oqtans on Amazon at this AMI: ami-5e839a37 #usegalaxy #BOSC2013 #ISMBECCB http://t.co/Nzwzc0gzQu
358564138047385600 Jul 20 08:28 @DNADigest @marinkazitnik emphasizes the importance of validation with orthogonal sequencing tech #ISMBECCB
358564923213094912 Jul 20 08:31 @gray_alasdair RT @soilandreyes: #ResearchObject poster at #BOSC2013 #ISMBECCB Come see and meet @team_myGrid during lunch now! http://www.slideshare.net/soilandreyes/2013-0718bosc-2013myexperimentresearchobjectsposter-24242509 http://t.co/fEHYwemxFD
358565510343966720 Jul 20 08:34 @BUbioinfo RT @emblorg: Fancy a break from #ismbeccb info-overload? Feast your eyes on this beauty, based on http://itol.embl.de...
358565558855282688 Jul 20 08:34 @WonderMixTape RT @luispedrocoelho: "a visualization is already an interpretation of the data, it may be wrong" #ismbeccb #BOSC2013
358565769711333378 Jul 20 08:35 @BUbioinfo RT @iddux: Tramontano: "I'm not sure protein structure prediction has improved, but assessment statistics definitely have". #AFP13 #ISMBECCB
358565868352966656 Jul 20 08:35 @DNADigest BigData: volume, velocity, variation, veracity - Gepetto for gene prioritization presented at #BOSC2013 #ISMBECCB http://t.co/xDgOromTSu
358565877534691328 Jul 20 08:35 @sciencestream RT @iddux: Tramontano: "I'm not sure protein structure prediction has improved, but assessment statistics definitely have". #AFP13 #ISMBECCB
358565880478703616 Jul 20 08:35 @zetieum Jean Peccoud: running a lab as a buisness? Young PI startup package is a capital #ismbeccb @peccoud
358565898652614656 Jul 20 08:35 @cdb_gras RT @cdessimoz: If you are at #ISMBECCB, consider attending @nskunca’s talk about function prediction and the open world assumption today at 11.35am #AFP13!
358566003862548482 Jul 20 08:36 @BUbioinfo RT @bffo: classic picture! RT @larsjuhljensen: Open Access: Do Not Enter #OpenAccess #ISMBECCB http://t.co/2INHVSKkM7
358566063602016257 Jul 20 08:36 @BUbioinfo RT @ISMBECCB: Welcome to ISMB/ECCB 2013! The official conference hashtag is #ismbeccb. Check out the conference schedule at http://t.co/3QHAIMF74r.
358567295301324801 Jul 20 08:41 @jamesmalone Tony Burdett presents auto ontology annotated tool Zooma http://www.ebi.ac.uk/fgpt/zooma/ #ISMBECCB #bioontology
358568589843898370 Jul 20 08:46 @rtraborn Would I be wrong in describing the architectural style of ICC Berlin as "Post-Modern Spaceship?" #ismbeccb
358568733842747392 Jul 20 08:47 @BUbioinfo Incredible information already pouring out of the @ISMBECCB ! Are you following along? #ISMBECCB
358569043772854272 Jul 20 08:48 @sciencestream RT @DNADigest: BigData: volume, velocity, variation, veracity - Gepetto for gene prioritization presented at #BOSC2013 #ISMBECCB http://t.co/xDgOromTSu
358569044536209408 Jul 20 08:48 @sciencestream RT @zetieum: Jean Peccoud: running a lab as a buisness? Young PI startup package is a capital #ismbeccb @peccoud
358569045446369280 Jul 20 08:48 @sciencestream RT @jamesmalone: Tony Burdett presents auto ontology annotated tool Zooma http://www.ebi.ac.uk/fgpt/zooma/ #ISMBECCB #bioontology
358569046125854720 Jul 20 08:48 @sciencestream RT @rtraborn: Would I be wrong in describing the architectural style of ICC Berlin as "Post-Modern Spaceship?" #ismbeccb
358569053868535808 Jul 20 08:48 @sciencestream RT @BUbioinfo: Incredible information already pouring out of the @ISMBECCB ! Are you following along? #ISMBECCB
358569340959854593 Jul 20 08:49 @nskunca Predicting gene function form the spatial organisation of the genome by Jianlin Cheng at AFP SIG. #ISMBECCB
358570777521565696 Jul 20 08:55 @bffo RT @rtraborn: Would I be wrong in describing the architectural style of ICC Berlin as "Post-Modern Spaceship?" #ismbeccb
358570781389127681 Jul 20 08:55 @flabiotechnews RT @bubioinfo: Incredible information already pouring out of the @ISMBECCB ! Are you following along? #ISMBECCB
358570948376543232 Jul 20 08:55 @cistronic @rtraborn same here - Constantly feels like being inside Battlestar Galactica - just a few minutes before the Cylons attack #ISMBECCB
358571021479051265 Jul 20 08:56 @i_am_kilpatrick RT @rtraborn: Would I be wrong in describing the architectural style of ICC Berlin as "Post-Modern Spaceship?" #ismbeccb
358571145538580480 Jul 20 08:56 @jonathancairns RT @rtraborn: Would I be wrong in describing the architectural style of ICC Berlin as "Post-Modern Spaceship?" #ismbeccb
358571203851591681 Jul 20 08:56 @Alfons_Valencia Going on Biolink SIG. Text mining alive and moving on. Posters discussed now. #ismbeccb
358571280510885888 Jul 20 08:57 @larsjuhljensen RT @Alfons_Valencia: Going on Biolink SIG. Text mining alive and moving on. Posters discussed now. #ismbeccb
358572099251605506 Jul 20 09:00 @bffo 2 many gr8 parallel sessions! RT @Alfons_Valencia: Going on Biolink SIG. Text mining alive and moving on. Posters discussed now. #ismbeccb
358572172475760641 Jul 20 09:00 @i_am_kilpatrick XXmotif 1st motif discovery method to use p-values to improve PWMs #RegGenSIG #ISMBECCB
358572488068182016 Jul 20 09:01 @sciencestream RT @nskunca: Predicting gene function form the spatial organisation of the genome by Jianlin Cheng at AFP SIG. #ISMBECCB
358572489615884288 Jul 20 09:01 @sciencestream RT @Alfons_Valencia: Going on Biolink SIG. Text mining alive and moving on. Posters discussed now. #ismbeccb
358572490425389056 Jul 20 09:01 @sciencestream RT @i_am_kilpatrick: XXmotif 1st motif discovery method to use p-values to improve PWMs #RegGenSIG #ISMBECCB
358572548579012609 Jul 20 09:02 @SahaSurya Lots of #proteomics, #genomics, #bioinformatics nuggets coming in from @ISMBECCB. Follow along at #ISMBECCB
358573785235980289 Jul 20 09:07 @arneelof From herpes to cancer. Keynote by Michael Schroeder #ismbeccb
358573832845950976 Jul 20 09:07 @sciencestream RT @SahaSurya: Lots of #proteomics, #genomics, #bioinformatics nuggets coming in from @ISMBECCB. Follow along at #ISMBECCB
358574723770224641 Jul 20 09:10 @Slmorg How many members of the training team does it take to lock an iPad?! Setting up at #ISMBECCB http://t.co/577BA2sSq9
358575182824226816 Jul 20 09:12 @luigra1 attendind the "Encode data access" tutorial #ISMBECCB
358575486567325696 Jul 20 09:13 @bffo omicsConnect from Joeri van der Velde | Molgenis | http://www.molgenis.org/wiki/WikiStart | https://github.com/molgenis/molgenis | #ISMBECCB #BOSC2013
358575494130057216 Jul 20 09:13 @DNADigest Molgenis uses blueprint database to support multiple Omics workflows #BOSC2013 #ISMBECCB
358576098579582976 Jul 20 09:16 @sciencestream RT @arneelof: From herpes to cancer. Keynote by Michael Schroeder #ismbeccb
358576099678494720 Jul 20 09:16 @sciencestream RT @Slmorg: How many members of the training team does it take to lock an iPad?! Setting up at #ISMBECCB http://t.co/577BA2sSq9
358576100345397248 Jul 20 09:16 @sciencestream RT @luigra1: attendind the "Encode data access" tutorial #ISMBECCB
358576101276545024 Jul 20 09:16 @sciencestream RT @bffo: omicsConnect from Joeri van der Velde | Molgenis | http://www.molgenis.org/wiki/WikiStart | https://github.com/molgenis/molgenis | #ISMBECCB #BOSC2013
358576102388031488 Jul 20 09:16 @sciencestream RT @DNADigest: Molgenis uses blueprint database to support multiple Omics workflows #BOSC2013 #ISMBECCB
358577967380697088 Jul 20 09:23 @arneelof I need an AI system to pick my talks to see @bffo: 2 many gr8 parallel sessions! RT @Alfons_Valencia: #ismbeccb
358579842029481984 Jul 20 09:31 @sciencestream RT @arneelof: I need an AI system to pick my talks to see @bffo: 2 many gr8 parallel sessions! RT @Alfons_Valencia: #ismbeccb
358580200872763392 Jul 20 09:32 @Slmorg Booth complete #ismbeccb ! http://t.co/y73gVMvafW
358580448362262528 Jul 20 09:33 @bentpetersen RT @Alfons_Valencia: Going on Biolink SIG. Text mining alive and moving on. Posters discussed now. #ismbeccb
358580826906578944 Jul 20 09:35 @bentpetersen RT @iddux: Tramontano: "I'm not sure protein structure prediction has improved, but assessment statistics definitely have". #AFP13 #ISMBECCB
358581348816404480 Jul 20 09:37 @sciencestream RT @Slmorg: Booth complete #ismbeccb ! http://t.co/y73gVMvafW
358582851777748992 Jul 20 09:43 @GenomeBiology #ISMBECCB come and get your turtle. http://t.co/v2ox7BFfaO
358584154185027584 Jul 20 09:48 @sciencestream RT @GenomeBiology: #ISMBECCB come and get your turtle. http://t.co/v2ox7BFfaO
358584251735744512 Jul 20 09:48 @stuffysour Sad I can't be at #ismbeccb, but my lovely colleagues are covering the #biomedbridges exhibition stand!
358584777445609473 Jul 20 09:50 @BillurEngin Tomorrow I have a short talk on integrating structure to phenotype-specific ppi networks. Its in Lounge 81, at 3:10 #ISMBECCB
358585533121175552 Jul 20 09:53 @sciencestream RT @stuffysour: Sad I can't be at #ismbeccb, but my lovely colleagues are covering the #biomedbridges exhibition stand!
358587363942875136 Jul 20 10:01 @moorejh RT @ISMBECCB: Welcome to ISMB/ECCB 2013! The official hashtag is #ismbeccb. Check out the conference schedule http://bit.ly/13QJO9N.
358587507228684289 Jul 20 10:01 @QTFocus RT @moorejh: RT @ISMBECCB: Welcome to ISMB/ECCB 2013! The official hashtag is #ismbeccb. Check out the conference schedule http://t.co/FKTJdA0n4A.
358587665702473728 Jul 20 10:02 @frank_foerster RT @GenomeBiology: #ISMBECCB come and get your turtle. http://t.co/v2ox7BFfaO
358587899308441600 Jul 20 10:03 @sciencestream RT @moorejh: RT @ISMBECCB: Welcome to ISMB/ECCB 2013! The official hashtag is #ismbeccb. Check out the conference schedule http://t.co/FKTJdA0n4A.
358588994247856128 Jul 20 10:07 @jonathancairns #ISMBECCB Plug for official #RegGen website, including "Papers of the Year": http://www.iscb.org/iscb-sigs-regsys/
358589091404722180 Jul 20 10:07 @DNADigest So many variant callers, so many dependencies - BCBio-nextgen presenting #translational #genomics at #BOSC2013 #ISMBECCB
358589209562845185 Jul 20 10:08 @sciencestream RT @jonathancairns: #ISMBECCB Plug for official #RegGen website, including "Papers of the Year": http://www.iscb.org/iscb-sigs-regsys/
358589210397532160 Jul 20 10:08 @sciencestream RT @DNADigest: So many variant callers, so many dependencies - BCBio-nextgen presenting #translational #genomics at #BOSC2013 #ISMBECCB
358589568431296512 Jul 20 10:09 @OBF_BOSC RT @DNADigest: BigData: volume, velocity, variation, veracity - Gepetto for gene prioritization presented at #BOSC2013 #ISMBECCB http://t.co/xDgOromTSu
358589790414839809 Jul 20 10:10 @arneelof Why do you have talks after lunch? #sleeping #ismbeccb
358589848333979651 Jul 20 10:10 @OBF_BOSC RT @DNADigest: Molgenis uses blueprint database to support multiple Omics workflows #BOSC2013 #ISMBECCB
358590103104782336 Jul 20 10:11 @pjacock RT @rtraborn: Would I be wrong in describing the architectural style of ICC Berlin as "Post-Modern Spaceship?" #ismbeccb
358590463579668480 Jul 20 10:13 @DNADigest Some sequencing characteristics are "known unknowns" eg some structural variants. Assess quality where possbl @chapmanb #BOSC2013 #ISMBECCB
358590625522143232 Jul 20 10:14 @sciencestream RT @arneelof: Why do you have talks after lunch? #sleeping #ismbeccb
358590751547990017 Jul 20 10:14 @bffo Brad Chapman uses Gemini for integrating data in sql https://github.com/arq5x/gemini #ISMBECCB #BOSC2013 #translational #bioinformatics
358591064547926016 Jul 20 10:15 @foreveremain Cli variant db access http://gemini.readthedocs.org/en/latest/ via @chapmanb #bosc2013 #ISMBECCB
358591455775825920 Jul 20 10:17 @chunleiwu @chapmanb: using IPython parallel computing for variants calling. #BOSC2013 #ISMBECCB
358591814770909184 Jul 20 10:18 @sciencestream RT @bffo: Brad Chapman uses Gemini for integrating data in sql https://github.com/arq5x/gemini #ISMBECCB #BOSC2013 #translational #bioinformatics
358591815760769024 Jul 20 10:18 @sciencestream RT @foreveremain: Cli variant db access http://gemini.readthedocs.org/en/latest/ via @chapmanb #bosc2013 #ISMBECCB
358591816658333697 Jul 20 10:18 @sciencestream RT @chunleiwu: @chapmanb: using IPython parallel computing for variants calling. #BOSC2013 #ISMBECCB
358592045192974336 Jul 20 10:19 @kiwi_k1 Ryan Chikhi talking about how to choose the optimal k-mer size for genome assembly. #ISMBECCB #hitseq
358592294368182272 Jul 20 10:20 @bffo Brad Chapman uses Arvados for pipelines https://arvados.org/ #ISMBECCB #BOSC2013 #translational #bioinformatics
358592725995630593 Jul 20 10:22 @chunleiwu Noticed @chapmanb 's slides were made from reveal.js: cool JavaScript presentation framework. #BOSC2013 #ISMBECCB
358592992980267008 Jul 20 10:23 @sciencestream RT @kiwi_k1: Ryan Chikhi talking about how to choose the optimal k-mer size for genome assembly. #ISMBECCB #hitseq
358592993919787008 Jul 20 10:23 @sciencestream RT @chunleiwu: Noticed @chapmanb 's slides were made from reveal.js: cool JavaScript presentation framework. #BOSC2013 #ISMBECCB
358593590676557824 Jul 20 10:25 @nskunca A good point at AFP SIG: "Most experimental characterisation happens on proteins we already know about." ~ Alex Bateman #ISMBECCB
358595152073338881 Jul 20 10:32 @kiwi_k1 Check out kmergenie which just won the best paper price at #ISMBECCB #hitseq http://kmergenie.bx.psu.edu/
358595314825322496 Jul 20 10:32 @danmaclean RT @rtraborn: Would I be wrong in describing the architectural style of ICC Berlin as "Post-Modern Spaceship?" #ismbeccb
358595725615456256 Jul 20 10:34 @sciencestream RT @kiwi_k1: Check out kmergenie which just won the best paper price at #ISMBECCB #hitseq http://kmergenie.bx.psu.edu/
358595968054210561 Jul 20 10:35 @jaumebp John Marioni on measuring single-cell expression, in the last talk of the #mlsb workshop #ISMBECCB
358596172396908544 Jul 20 10:36 @anilthanki @danmaclean @rtraborn yes it's like a maze, #ISMBECCB should have an extra activity to find halls or race from A to B in time and prizes
358596784546787329 Jul 20 10:38 @bffo two pancreatic cancer genomics talks at the same time at SIGs of #ISMBECCB (Jeremy Goeks at #BOSC2013 and John McPherson @ #hitsig )
358597206481571840 Jul 20 10:40 @sciencestream RT @jaumebp: John Marioni on measuring single-cell expression, in the last talk of the #mlsb workshop #ISMBECCB
358597208423563264 Jul 20 10:40 @sciencestream RT @anilthanki: @danmaclean @rtraborn yes it's like a maze, #ISMBECCB should have an extra activity to find halls or race from A to B in time and prizes
358597209505677312 Jul 20 10:40 @sciencestream RT @bffo: two pancreatic cancer genomics talks at the same time at SIGs of #ISMBECCB (Jeremy Goeks at #BOSC2013 and John McPherson @ #hitsig )
358597495640694784 Jul 20 10:41 @GenomeAnalysis TGAC stand ready for #ISMBECCB Come say hi at stand no. 4! http://t.co/HAVzW1uwml
358597885933654016 Jul 20 10:42 @anilthanki RT @GenomeAnalysis: TGAC stand ready for #ISMBECCB Come say hi at stand no. 4! http://t.co/HAVzW1uwml
358597909228822528 Jul 20 10:42 @DNADigest RT @bffo: two pancreatic cancer genomics talks at the same time at SIGs of #ISMBECCB (Jeremy Goeks at #BOSC2013 and John McPherson @ #hitsig )
358598241178238976 Jul 20 10:44 @jonathancairns @anilthanki @danmaclean @rtraborn Have you just invented #ISMBECCB Mario Kart? Instead of boosts, you get (transcriptional) bursts. etc...
358599262130937856 Jul 20 10:48 @sciencestream RT @GenomeAnalysis: TGAC stand ready for #ISMBECCB Come say hi at stand no. 4! http://t.co/HAVzW1uwml
358599263502475264 Jul 20 10:48 @sciencestream RT @jonathancairns: @anilthanki @danmaclean @rtraborn Have you just invented #ISMBECCB Mario Kart? Instead of boosts, you get (transcriptional) bursts. etc...
358599782517841920 Jul 20 10:50 @AidanBudd .@konradfoerstner p.s. tweeting about the #ismbeccb #unseminar BoF with #ismb2013unconf would help us keep track of any comments about it
358600522494140416 Jul 20 10:53 @danmaclean RT @anilthanki: @danmaclean @rtraborn yes it's like a maze, #ISMBECCB should have an extra activity to find halls or race from A to B in time and prizes
358600534871539712 Jul 20 10:53 @danmaclean RT @jonathancairns: @anilthanki @danmaclean @rtraborn Have you just invented #ISMBECCB Mario Kart? Instead of boosts, you get (transcriptional) bursts. etc...
358601136661467136 Jul 20 10:55 @jonathancairns #ISMBECCB #RegGen Jan Hapala emphasizing how important it is to consider the rotation of DNA when studying TATA boxes
358601785273249793 Jul 20 10:58 @sciencestream RT @AidanBudd: .@konradfoerstner p.s. tweeting about the #ismbeccb #unseminar BoF with #ismb2013unconf would help us keep track of any comments about it
358601791493373952 Jul 20 10:58 @sciencestream RT @jonathancairns: #ISMBECCB #RegGen Jan Hapala emphasizing how important it is to consider the rotation of DNA when studying TATA boxes
358601941556805633 Jul 20 10:59 @manuelcorpas #ISMBECCB fantastic #JPI meeting: @peccoud presented how to run your lab as a business
358602743008604160 Jul 20 11:02 @manuelcorpas #JPI #ISMBECCB the nature of language barrier: should foreigners decide to learn the local language before carry on their science
358603376931897344 Jul 20 11:04 @manuelcorpas #JPI #ISMBECCB collaboration is not optional!
358603589549162497 Jul 20 11:05 @winhide #ISMBECCB #BOSC @seaneddy critical to publish descr. of software in order to satisfy lab milestones+ensure sustainable impact and funding
358603674387750912 Jul 20 11:05 @sciencestream RT @manuelcorpas: #ISMBECCB fantastic #JPI meeting: @peccoud presented how to run your lab as a business
358603771066068992 Jul 20 11:06 @rtraborn @jonathancairns @anilthanki @danmaclean I'd play it! Also, this place would be tremendous for Hide-and-Seek or Capture the Flag. #ismbeccb
358604652863963136 Jul 20 11:09 @jonathancairns #ISMBECCB #RegGen Idit Kosti claims that exon expression depends on a) DNA methylation relative to local DNA b) local histone modifications
358604730852839427 Jul 20 11:10 @rtraborn Something I learned at #PostEncode: there's an ENCODE VM & Cloud Instance to reproduce published analyses. http://scofield.bx.psu.edu/~dannon/encodevm/ #ismbeccb
358605001842622465 Jul 20 11:11 @manuelcorpas #JPI #ISMBECCB in collaboration, honesty is a long term investment
358605233100181504 Jul 20 11:12 @sciencestream RT @jonathancairns: #ISMBECCB #RegGen Idit Kosti claims that exon expression depends on a) DNA methylation relative to local DNA b) local histone modifications
358605836244889600 Jul 20 11:14 @arneelof Andrei Lukas links protein evolution (claiming that hardly any novel domains are created) with linguistic evolution #ismbeccb
358605915437535232 Jul 20 11:14 @jonathancairns #ISMBECCB #RegGen Good question asking if methylation -> alternative splicing link is proven to be causal. (answer sounds like "not yet")
358606294749835264 Jul 20 11:16 @sciencestream RT @arneelof: Andrei Lukas links protein evolution (claiming that hardly any novel domains are created) with linguistic evolution #ismbeccb
358606295492214784 Jul 20 11:16 @sciencestream RT @jonathancairns: #ISMBECCB #RegGen Good question asking if methylation -> alternative splicing link is proven to be causal. (answer sounds like "not yet")
358606683603750912 Jul 20 11:17 @BUbioinfo RT @jonathancairns: #ISMBECCB #RegGen Idit Kosti claims that exon expression depends on a) DNA methylation relative to local DNA b) local histone modifications
358606791783247872 Jul 20 11:18 @thmourikis RT @manuelcorpas: #JPI #ISMBECCB in collaboration, honesty is a long term investment
358606850331516928 Jul 20 11:18 @DNADigest RT @rtraborn: Would I be wrong in describing the architectural style of ICC Berlin as "Post-Modern Spaceship?" #ismbeccb
358607516906688513 Jul 20 11:21 @bffo RT @GenomeAnalysis: TGAC stand ready for #ISMBECCB Come say hi at stand no. 4! http://t.co/HAVzW1uwml
358607843248705537 Jul 20 11:22 @manuelcorpas #JPI #ISMBECCB @ismbeccb could play a role in helping PI find #ResearchFunding
358607943144443906 Jul 20 11:22 @manuelcorpas RT @genomeanalysis: TGAC stand ready for #ISMBECCB Come say hi at stand no. 4! http://t.co/3fhlFdZdWN
358607998089830400 Jul 20 11:23 @WonderMixTape @OHSUBCB PhD Fellow Aurora Blucher volunteering @ISMBECCB Berlin 2013 #ISMBECCB @iscbsc http://t.co/EXYKipt0l3
358608409589194752 Jul 20 11:24 @manuelcorpas #JPI #ISMBECCB we should consider lobbying to have bioinformatics-specific grants
358608708546207745 Jul 20 11:25 @arneelof No one of the fifty ancestral peptides detected by Lupas are found in the same domain. Why? #ismbeccb
358608936225619968 Jul 20 11:26 @arneelof How? "@manuelcorpas: #JPI #ISMBECCB @ismbeccb could play a role in helping PI find #ResearchFunding"
358609023119400960 Jul 20 11:27 @arneelof RT @manuelcorpas: #JPI #ISMBECCB we should consider lobbying to have bioinformatics-specific grants
358609048922365952 Jul 20 11:27 @marinkazitnik I have been selected as the first prize winner at #CAMDA #ISMBECCB. Talk slides are http://prezi.com/jf0hotfsqzd9/matrix-factorization-based-data-fusion-for-drug-induced-liver-injury-prediction/
358609137451958272 Jul 20 11:27 @sciencestream RT @manuelcorpas: #JPI #ISMBECCB @ismbeccb could play a role in helping PI find #ResearchFunding
358609138965676034 Jul 20 11:27 @GenomeBiology #BOSC2013 DOIs should be assigned to software. #ISMBECCB
358609144565493760 Jul 20 11:27 @sciencestream RT @WonderMixTape: @OHSUBCB PhD Fellow Aurora Blucher volunteering @ISMBECCB Berlin 2013 #ISMBECCB @iscbsc http://t.co/EXYKipt0l3
358609147027529728 Jul 20 11:27 @sciencestream RT @manuelcorpas: #JPI #ISMBECCB we should consider lobbying to have bioinformatics-specific grants
358609153105072128 Jul 20 11:27 @sciencestream RT @arneelof: No one of the fifty ancestral peptides detected by Lupas are found in the same domain. Why? #ismbeccb
358609161229459456 Jul 20 11:27 @sciencestream RT @marinkazitnik: I have been selected as the first prize winner at #CAMDA #ISMBECCB. Talk slides are http://prezi.com/jf0hotfsqzd9/matrix-factorization-based-data-fusion-for-drug-induced-liver-injury-prediction/
358609187070160898 Jul 20 11:27 @manuelcorpas #JPI #ISMBECCB charities don't pay overhead
358609439617593347 Jul 20 11:28 @jamesmalone Wonderful keynote from Anita de Waard "Improve evidence & scale up curation" #ISMBECCB #bioontology
358609699295752192 Jul 20 11:29 @Bioinfomatic RT @GenomeBiology: #BOSC2013 DOIs should be assigned to software. #ISMBECCB
358609808426942466 Jul 20 11:30 @jonathancairns #ISMBECCB Speakers! Pls bear in mind that if you use red & green heatmaps, plots, etc I can't tell the colours apart. #XChromosomeDeficiency
358610147775893504 Jul 20 11:31 @danmaclean RT @GenomeBiology: #BOSC2013 DOIs should be assigned to software. #ISMBECCB
358610148937306113 Jul 20 11:31 @aaronquinlan RT @bffo: Brad Chapman uses Gemini for integrating data in sql https://github.com/arq5x/gemini #ISMBECCB #BOSC2013 #translational #bioinformatics
358610226167037952 Jul 20 11:31 @arneelof There are already (too?) many bioinformatic grants for service "#ISMBECCB we should consider lobbying to have bioinformatics-specific grant"
358610447874154496 Jul 20 11:32 @sciencestream RT @GenomeBiology: #BOSC2013 DOIs should be assigned to software. #ISMBECCB
358610448671072257 Jul 20 11:32 @sciencestream RT @manuelcorpas: #JPI #ISMBECCB charities don't pay overhead
358610840833888258 Jul 20 11:34 @drchriscole Amen to that RT @DNADigest Sean Eddy: It _is_ worth the time and effort to engineer useful tools. #BOSC2013 #ISMBECCB
358611243588136960 Jul 20 11:35 @DNADigest RT @drchriscole: Amen to that RT @DNADigest Sean Eddy: It _is_ worth the time and effort to engineer useful tools. #BOSC2013 #ISMBECCB
358611648422354944 Jul 20 11:37 @sciencestream RT @drchriscole: Amen to that RT @DNADigest Sean Eddy: It _is_ worth the time and effort to engineer useful tools. #BOSC2013 #ISMBECCB
358612194327412736 Jul 20 11:39 @arneelof talk about http://www.ebi.ac.uk/thornton-srv/databases/FunTree/ version 2 has now 379 cath superfamilies #ISMBECCB
358612245644734464 Jul 20 11:39 @PLOSCompBiol The PLOS booth (13) is set up @ #ISMBECCB! Drop by to pick up your free t-shirt from tomorrow: http://blogs.plos.org/biologue/2013/06/20/plos-computational-biology-announces-t-shirt-design-winner/ http://t.co/0df14XMamj
358613258045231104 Jul 20 11:43 @sciencestream RT @arneelof: talk about http://www.ebi.ac.uk/thornton-srv/databases/FunTree/ version 2 has now 379 cath superfamilies #ISMBECCB
358613261669138432 Jul 20 11:43 @sciencestream RT @PLOSCompBiol: The PLOS booth (13) is set up @ #ISMBECCB! Drop by to pick up your free t-shirt from tomorrow: http://blogs.plos.org/biologue/2013/06/20/plos-computational-biology-announces-t-shirt-design-winner/ http://t.co/0df14XMamj
358613311509630977 Jul 20 11:44 @arneelof Fint miss meet the editors with @PLOSCompBiol schedule at http://www.plos.org/computational-biology-news/ I'll be there Sunday 13:45 #ISMBECCB
358614865021526016 Jul 20 11:50 @sciencestream RT @arneelof: Fint miss meet the editors with @PLOSCompBiol schedule at http://www.plos.org/computational-biology-news/ I'll be there Sunday 13:45 #ISMBECCB
358615974477848577 Jul 20 11:54 @frank_foerster RT @PLOSCompBiol: The PLOS booth (13) is set up @ #ISMBECCB! Drop by to pick up your free t-shirt from tomorrow: http://blogs.plos.org/biologue/2013/06/20/plos-computational-biology-announces-t-shirt-design-winner/ http://t.co/0df14XMamj
358616873187172352 Jul 20 11:58 @arneelof #3dsig is still running for 40 minutes although reception started 30 minutes ago. Save a drink for us #ismbeccb
358617778997444608 Jul 20 12:01 @sciencestream RT @arneelof: #3dsig is still running for 40 minutes although reception started 30 minutes ago. Save a drink for us #ismbeccb
358618842546704384 Jul 20 12:06 @arneelof #gendercount at #ismbeccb female keynote 1/6 speaker 20/86 (approximately). Hope to at least see more female keynote speakers next time.
358618956988678144 Jul 20 12:06 @sciencestream RT @arneelof: #gendercount at #ismbeccb female keynote 1/6 speaker 20/86 (approximately). Hope to at least see more female keynote speakers next time.
358620846019334144 Jul 20 12:14 @CaraHameed RT @arneelof: From structure to evolution of mutations using a fitness landscape in hiv proteases #ismbeccb
358621568597237760 Jul 20 12:16 @arneelof DeLano award to Tim Wiegels #3dsig #ismbeccb
358621989717958656 Jul 20 12:18 @PLOSMedicine RT @PLOSCompBiol: The PLOS booth (13) is set up @ #ISMBECCB! Drop by to pick up your free t-shirt from tomorrow: http://blogs.plos.org/biologue/2013/06/20/plos-computational-biology-announces-t-shirt-design-winner/ http://t.co/0df14XMamj
358622220366905344 Jul 20 12:19 @sciencestream RT @arneelof: DeLano award to Tim Wiegels #3dsig #ismbeccb
358622252809465856 Jul 20 12:19 @arneelof awards to Maria Safi for oral presentation and. Iain Moal, Grace Teng, Sikander Hayat, Kate Stafford for posters #ismbeccb
358623556592480256 Jul 20 12:24 @sciencestream RT @arneelof: awards to Maria Safi for oral presentation and. Iain Moal, Grace Teng, Sikander Hayat, Kate Stafford for posters #ismbeccb
358625348079984640 Jul 20 12:32 @Alfons_Valencia Metering with sponsors: Great to see old friends and to meet new ones. THANKS very much for your support!! #ismbeccb
358626721966600192 Jul 20 12:37 @ISMBECCB RT @BUbioinfo: Incredible information already pouring out of the @ISMBECCB ! Are you following along? #ISMBECCB
358627003807055872 Jul 20 12:38 @overlord_tm RT @marinkazitnik: I have been selected as the first prize winner at #CAMDA #ISMBECCB. Talk slides are http://prezi.com/jf0hotfsqzd9/matrix-factorization-based-data-fusion-for-drug-induced-liver-injury-prediction/
358628658229301248 Jul 20 12:45 @jilld17 RT @jonathancairns: #ISMBECCB #RegGen Useful vocab word from Struan Grant: "Apophenia - seeing patterns in meaningless data"
358631283960066048 Jul 20 12:55 @Theo_Bloom RT @PLOSCompBiol: The PLOS booth (13) is set up @ #ISMBECCB! Drop by to pick up your free t-shirt from tomorrow: http://blogs.plos.org/biologue/2013/06/20/plos-computational-biology-announces-t-shirt-design-winner/ http://t.co/0df14XMamj
358631551581425664 Jul 20 12:56 @yaydinson Biked to the opening reception of #ismbeccb at ICC, Berlin. Nice chat with @Chris_Evelo .Look forward for his lecture tomorrow.
358632222485921792 Jul 20 12:59 @sciencestream RT @yaydinson: Biked to the opening reception of #ismbeccb at ICC, Berlin. Nice chat with @Chris_Evelo .Look forward for his lecture tomorrow.
358635759512723456 Jul 20 13:13 @mwilsonsayres RT @arneelof: #gendercount at #ismbeccb female keynote 1/6 speaker 20/86 (approximately). Hope to at least see more female keynote speakers next time.
358639776234090496 Jul 20 13:29 @SahaSurya RT @winhide: #ISMBECCB #BOSC @seaneddy critical to publish descr. of software in order to satisfy lab milestones+ensure sustainable impact and funding
358641231355584512 Jul 20 13:35 @ISMBECCB @DavidBurt8 @BUbioinfo Yes, you do! In the meantime, follow along at #ismbeccb and watch ISCB web site for videos after conference :)
358647535449423872 Jul 20 14:00 @VickieMinton1 RT @arneelof: From structure to evolution of mutations using a fitness landscape in hiv proteases #ismbeccb
358650416613314560 Jul 20 14:11 @BUbioinfo RT @manuelcorpas: #JPI #ISMBECCB we should consider lobbying to have bioinformatics-specific grants
358655213843918848 Jul 20 14:30 @BUbioinfo What was your best take-away from the #ISMBECCB today? Share with us.
358655944584359936 Jul 20 14:33 @sciencestream RT @BUbioinfo: What was your best take-away from the #ISMBECCB today? Share with us.
358657154598707200 Jul 20 14:38 @johnpharmd MT @GigaScience @DNADigest:S.Eddy: Why the fuss about 'open' 2day? More about mechanisms than principle, which isn't new #BOSC2013 #ISMBECCB
358675635524210689 Jul 20 15:51 @kastacholamine Thanks to everyone for a great #3dsig, and I'm honored to have received a poster prize! #ismbeccb
358675646697836545 Jul 20 15:51 @kastacholamine Especially @RNajmanovich (and other organizers if they are on twitter and I don't know about it :) #3dsig #ismbeccb
358675681837727746 Jul 20 15:52 @kastacholamine If any of the picture takers want a pdf of my poster, it's at https://www.dropbox.com/sh/ikciby34r189wks/HQg80zHcyN (3.5M) #3dsig #ismbeccb
358675764490674177 Jul 20 15:52 @kastacholamine And the app I was using to display trajectory movies on my iPad is called @aurasma #3dsig #ismbeccb
358676481083322368 Jul 20 15:55 @AMathelier RT @i_am_kilpatrick: XXmotif 1st motif discovery method to use p-values to improve PWMs #RegGenSIG #ISMBECCB
358676521890103296 Jul 20 15:55 @modernscientist Congrats! RT @kastacholamine: Thanks to everyone for a great #3dsig, and I'm honored to have received a poster prize! #ismbeccb
358676549140504576 Jul 20 15:55 @modernscientist RT @kastacholamine: If any of the picture takers want a pdf of my poster, it's at https://www.dropbox.com/sh/ikciby34r189wks/HQg80zHcyN (3.5M) #3dsig #ismbeccb
358676573203202048 Jul 20 15:55 @modernscientist RT @kastacholamine: And the app I was using to display trajectory movies on my iPad is called @aurasma #3dsig #ismbeccb
358676785484935168 Jul 20 15:56 @pedrobeltrao that was short but nice reception for #ISMBECCB See you all tomorrow
358676887591473152 Jul 20 15:56 @sciencestream RT @kastacholamine: Thanks to everyone for a great #3dsig, and I'm honored to have received a poster prize! #ismbeccb
358676888325468160 Jul 20 15:56 @sciencestream RT @kastacholamine: Especially @RNajmanovich (and other organizers if they are on twitter and I don't know about it :) #3dsig #ismbeccb
358676889034317824 Jul 20 15:56 @sciencestream RT @kastacholamine: If any of the picture takers want a pdf of my poster, it's at https://www.dropbox.com/sh/ikciby34r189wks/HQg80zHcyN (3.5M) #3dsig #ismbeccb
358676889780903936 Jul 20 15:56 @sciencestream RT @kastacholamine: And the app I was using to display trajectory movies on my iPad is called @aurasma #3dsig #ismbeccb
358676890808487937 Jul 20 15:56 @sciencestream RT @pedrobeltrao: that was short but nice reception for #ISMBECCB See you all tomorrow
358680337162842112 Jul 20 16:10 @kastacholamine This is my 1st #3dsig but I'd say 25% women attendees isn't bad. Been to way more skewed conferences. Not sure of #ismbeccb stats @arneelof
358680453244801024 Jul 20 16:10 @kastacholamine RT @arneelof: #gendercount at #ismbeccb female keynote 1/6 speaker 20/86 (approximately). Hope to at least see more female keynote speakers next time.
358685381727768576 Jul 20 16:30 @kastacholamine Also I really have to recommend the @GenomeBiology @biomedcentral turtle. Look at this little guy! #ismbeccb http://t.co/yoAP2tenyT
358686194517176320 Jul 20 16:33 @sciencestream RT @kastacholamine: Also I really have to recommend the @GenomeBiology @biomedcentral turtle. Look at this little guy! #ismbeccb http://t.co/yoAP2tenyT
358693577905287169 Jul 20 17:03 @RomainStuder RT @moorejh: RT @ISMBECCB: Welcome to ISMB/ECCB 2013! The official hashtag is #ismbeccb. Check out the conference schedule http://t.co/FKTJdA0n4A.
358694266463195137 Jul 20 17:05 @RomainStuder RT @iddux: Ouzounis shows this hilarious cartoon: http://www.genomicglossaries.com/images/shenemangenome.gif #AFP13 #ISMBECCB
358694307563180032 Jul 20 17:06 @RomainStuder RT @iddux: I've just been informed that the official tag for ISMB 2013 is #ISMBECCB. If you use another tag, we won't visit your poster :)
358694481551310849 Jul 20 17:06 @RomainStuder WiFi is really bad is the rooms, if it exists... #ISMBECCB
358694590658150400 Jul 20 17:07 @sciencestream RT @RomainStuder: WiFi is really bad is the rooms, if it exists... #ISMBECCB
358695065859784704 Jul 20 17:09 @RomainStuder Today I got my first poster award !!! \o/ Thanks ! #AFP13 #ISMBECCB
358695968893845504 Jul 20 17:12 @sciencestream RT @RomainStuder: Today I got my first poster award !!! \o/ Thanks ! #AFP13 #ISMBECCB
358701961299763200 Jul 20 17:36 @frank_foerster #ISMBECCB a big thanks to the organizers of the #JPI meeting. Was a really good time today
358702521994739713 Jul 20 17:38 @sciencestream RT @frank_foerster: #ISMBECCB a big thanks to the organizers of the #JPI meeting. Was a really good time today
358704599466651649 Jul 20 17:46 @widdowquinn I hope ICSB is good this year, since I passed up #BOSC2013 and #ISMBECCB to attend, and my Twitter feed makes them sound amazing.
358705045514493952 Jul 20 17:48 @sciencestream RT @widdowquinn: I hope ICSB is good this year, since I passed up #BOSC2013 and #ISMBECCB to attend, and my Twitter feed makes them sound amazing.
358705221435793408 Jul 20 17:49 @janosbinder RT @arneelof: DeLano award to Tim Wiegels #3dsig #ismbeccb
358707064148721664 Jul 20 17:56 @pjacock Remembered to start archiving tweets early today, so this #storify for #BOSC2013 day 2 should be ~complete http://storify.com/pjacock/bosc-2013-day-two #ISMBECCB
358713423804497920 Jul 20 18:21 @VickySchneiderG RT @GenomeAnalysis: TGAC stand ready for #ISMBECCB Come say hi at stand no. 4! http://t.co/HAVzW1uwml
358729093920997376 Jul 20 19:24 @coxtonyj RT @kiwi_k1: Check out kmergenie which just won the best paper price at #ISMBECCB #hitseq http://kmergenie.bx.psu.edu/
358729148614709248 Jul 20 19:24 @nskunca The best talk awards at AFP SIG: Noah Youngs (negative examples in AFP) and Joachim Bargsten (AFP in plants) #ISMBECCB
358729447111143424 Jul 20 19:25 @sciencestream RT @nskunca: The best talk awards at AFP SIG: Noah Youngs (negative examples in AFP) and Joachim Bargsten (AFP in plants) #ISMBECCB
358731132784738304 Jul 20 19:32 @nskunca I won the best poster award at the AFP SIG. You can see it here: http://people.inf.ethz.ch/skuncan/2013-07-08-poster.png #ISMBECCB
358808901673680896 Jul 21 00:41 @AidanBudd @konradfoerstner been 2/organised any un*-things? ru up for sharing this experience in a flash talk @ the bof? #ismb2013unconf #ismbeccb
358816226887204864 Jul 21 01:10 @sunhwan RT @kastacholamine: If any of the picture takers want a pdf of my poster, it's at https://www.dropbox.com/sh/ikciby34r189wks/HQg80zHcyN (3.5M) #3dsig #ismbeccb
358826604211879936 Jul 21 01:51 @yaydinson #Berlin #Sunday #Morning #ismbeccb #Keynotes #Gil Ast and #Goncalo Abecasis
358827958175531008 Jul 21 01:57 @sciencestream RT @yaydinson: #Berlin #Sunday #Morning #ismbeccb #Keynotes #Gil Ast and #Goncalo Abecasis
358834304857559040 Jul 21 02:22 @iysik_com Poster's up! Visit it at F31 tomorrow in the central lobby. #ISMBECCB http://t.co/QAj68Qy3a3
358834718588276736 Jul 21 02:23 @sciencestream RT @iysik_com: Poster's up! Visit it at F31 tomorrow in the central lobby. #ISMBECCB http://t.co/QAj68Qy3a3
358839092609417216 Jul 21 02:41 @jjspr sunny Sunday morning at great #ismbeccb, see you there
358839742324297728 Jul 21 02:43 @sciencestream RT @jjspr: sunny Sunday morning at great #ismbeccb, see you there
358840326317817856 Jul 21 02:46 @Chris_Evelo I will talk about the @Open_PHACTS at the T9 technology track this morning at #ismbeccb
358840955803140096 Jul 21 02:48 @Chris_Evelo Teaser? No, creating RDF from two data bases and loading that in one triple store does not magically create linked data #ISMBECCB
358841021138223104 Jul 21 02:49 @sciencestream RT @Chris_Evelo: I will talk about the @Open_PHACTS at the T9 technology track this morning at #ismbeccb
358841401745739777 Jul 21 02:50 @Chris_Evelo Thanks! RT @yaydinson: opening reception of #ismbeccb at ICC, Berlin. Nice chat with @Chris_Evelo .Look forward for his lecture tomorrow.
358841550622973952 Jul 21 02:51 @i_am_kilpatrick Surprisingly few people here so far for #ISMBECCB welcome - thought I was late! #phew
358841747440271360 Jul 21 02:51 @satagopam ISCB2013 just kicked off with the welcome by Burkhard Rost, ISCB president #ISMBECCB
358842078232842240 Jul 21 02:53 @sciencestream RT @i_am_kilpatrick: Surprisingly few people here so far for #ISMBECCB welcome - thought I was late! #phew
358842079101087744 Jul 21 02:53 @sciencestream RT @satagopam: ISCB2013 just kicked off with the welcome by Burkhard Rost, ISCB president #ISMBECCB
358842153927049216 Jul 21 02:53 @CLCbio At ISMB in Berlin? Swing by booth #17 and get the explanation on what 'cake-driven innovation' is... #ismbeccb
358842707709419520 Jul 21 02:55 @rtraborn And we're off! ISMB Co-Chair Burkhard Rost says a few words to get the main conference started. #ISMBECCB http://t.co/pJzpEt7BWa
358842783563399168 Jul 21 02:56 @Alexbateman1 Now ISMB really gets under way Burkhard Rost and Anna Tramontano kick off in Hall 1. #ISMBECCB
358842834335440897 Jul 21 02:56 @sjcockell @i_am_kilpatrick people underestimating the distance from the U-bahn to hall 1? #ismbeccb
358843395537518592 Jul 21 02:58 @rtraborn Rost said there are ~70 lifetime ISCB members. I contend they should be given particularly conspicuous labels for their nametags. #ISMBECCB
358843600404090880 Jul 21 02:59 @BillurEngin very happy to be here.. openning welcome #ISMBECCB
358843760777498624 Jul 21 02:59 @reactome ISMB is getting under way. Keynote speaker is Gil Ast #ismbeccb
358843762576855040 Jul 21 02:59 @robinhaw ISMB is getting under way. Keynote speaker is Gil Ast #ismbeccb
358843765403824129 Jul 21 02:59 @satagopam Anna Tramontano introducing Gil Ast #ISMBECCB
358890313462460417 Jul 21 06:04 @jonathancairns #LBR04 description of HiC: "You crosslink the proteins. Then... magic happens." #ISMBECCB
358890441967538176 Jul 21 06:05 @arneelof Ceci n'est pas un protein (it is a model) #ismbeccb
358890461035237376 Jul 21 06:05 @sjcockell @arneelof will he be validating the fact that his validation is valid? #validation #ismbeccb
358890622947971072 Jul 21 06:06 @arneelof RT @sjcockell: ‘Most bioinformatics software is written by academics’ - you say that like its a bad thing! ;) #ismbeccb #TT07
358890701519470592 Jul 21 06:06 @Chris_Evelo In 20 min… RT @sjcockell: .@Chris_Evelo is basically describing all of #bioinformatics now #ambiguity #ismbeccb #TT05
358890759316967424 Jul 21 06:06 @jjspr Torsten Schwede #ismbeccb Validating Protein Homology Models - curious, how-to-do this reliably and robustly
358890793253085184 Jul 21 06:06 @Chris_Evelo RT @foreveremain: #ISMBECCB @Chris_Evelo void - yet another data blob provenance descriptor: http://www.openphacts.org/specs/2012/WD-datadesc-20121019/
358890917119283200 Jul 21 06:07 @bffo AK "the most important slide of my talk" #tt07 #ismbeccb http://t.co/BkBrhJj4Oc
358890996823633921 Jul 21 06:07 @sjcockell XworX builds on many open source projects (taverna, openstack, galaxy etc) #ismbeccb #TT07
358891044651696128 Jul 21 06:07 @iysik_com @i_am_kilpatrick How about red/green/blue colour coding in graphs? #ismbeccb #bingo
358891099571896320 Jul 21 06:08 @andrewjpage RT @sjcockell: ‘You have 3 years to build it, and then you have to keep it going - but we’re not going to fund that’ :( #ismbeccb #TT05
358891139199270912 Jul 21 06:08 @arneelof #ismbeccb http://t.co/mdS77iIaqI
358891155347357697 Jul 21 06:08 @GigaScience AK trying to tackle usability issue by virtualising open source bioinformatics tools & workflows http://www.xworx.org/ #TT07 #ISMBECCB
358891182799065089 Jul 21 06:08 @AmyeKenall #ISMBECCB press meeting: most profound thing to come out of genomics is social: we all come from same place
358891239070257152 Jul 21 06:08 @dagmarwaltemath RT @sjcockell: @arneelof will he be validating the fact that his validation is valid? #validation #ismbeccb
358891367784644611 Jul 21 06:09 @Chris_Evelo @GigaScience for #nanopubs you should probably talk to Marco Roos, @Open_PHACTS member who is at #ismbeccb
358891528632016896 Jul 21 06:09 @sjcockell Twitter warming up nicely now #ismbeccb
358891565260865537 Jul 21 06:09 @GenomeAnalysis Next generation of de Bruijn graphs by Sergey at 1410 #ISMBECCB
358891611562201088 Jul 21 06:10 @thondeboer RT @sjcockell: ‘You have 3 years to build it, and then you have to keep it going - but we’re not going to fund that’ :( #ismbeccb #TT05
358891643606282240 Jul 21 06:10 @arneelof We can characterise 60% of the human proteome but 30% is disordered so not much (soluble) is left to predict #ismbeccb
358891902470750208 Jul 21 06:11 @arneelof RT @AmyeKenall: #ISMBECCB press meeting: most profound thing to come out of genomics is social: we all come from same place
358892204053368832 Jul 21 06:12 @sjcockell Live coding! Brave man Albert Kriegner #ismbeccb #TT07
358892220499234816 Jul 21 06:12 @jonathancairns Often see HiC data violating triangle inequality. i.e. DNA violating the physical laws of space. Why? Sample heterogeneity #LBR04 #ISMBECCB
358892447637581824 Jul 21 06:13 @frank_foerster #ISMBECCB #PP10 Trinity performed best for assembly of bacterial transcripts
358892532266434560 Jul 21 06:13 @arneelof RT @sjcockell: Live coding! Brave man Albert Kriegner #ismbeccb #TT07
358892558593691651 Jul 21 06:13 @sjcockell Oh no, wait. I’m mistaken. These are slides. Boo (just kidding) #ismbeccb #TT07
358892561676509185 Jul 21 06:13 @rtraborn Seats in Hall 7 are in high demand. I half-expected seat-scalpers outside in the foyer. #ismbeccb #pp10 http://t.co/Rk7uvlVGOb
358892662113697792 Jul 21 06:14 @sciencestream RT @sjcockell: @jonathancairns @i_am_kilpatrick I prefer confusogram :) tho ridiculogram is spot on too #ismbeccb #bingo
358892749036462080 Jul 21 06:14 @sjcockell RT @frank_foerster: #ISMBECCB #PP10 Trinity performed best for assembly of bacterial transcripts
358892782519193600 Jul 21 06:14 @pedrobeltrao RT @arneelof: We can characterise 60% of the human proteome but 30% is disordered so not much (soluble) is left to predict #ismbeccb
358892863599288320 Jul 21 06:15 @GigaScience AK showing easiest way to build xworx Apps is with Taverna & #useglaxy workflows #ISMBECCB #TT07
358892924739649537 Jul 21 06:15 @thondeboer Wenzhong Xiao "Most mouse models are not a good model for human diseases and a waste of money" #ismbeccb http://ow.ly/i/2FixU
358892966771167232 Jul 21 06:15 @sjcockell RT @GigaScience: AK showing easiest way to build xworx Apps is with Taverna & #useglaxy workflows #ISMBECCB #TT07
358893085096292353 Jul 21 06:15 @jjspr No score fits all, nice one #ismbeccb from Torsten
358893557920190464 Jul 21 06:17 @Hoellenmotte #ismbeccb roofgarden http://t.co/lY8FmbgcxK
358893586420477952 Jul 21 06:17 @GigaScience AK: currently 500 tools and services configured for XworX as Apps (or "Xapp"s) #TT07 #ISMBECCB
358893905472798722 Jul 21 06:19 @emblebi Interested in online training? Visit @emblebi at booth 6 for a free 'love data' mouse mat or screen cloth! #ISMBECCB
358893914037944320 Jul 21 06:19 @DNADigest RT @bffo: AK "the most important slide of my talk" #tt07 #ismbeccb http://t.co/BkBrhJj4Oc
358893962930950144 Jul 21 06:19 @DNADigest RT @sjcockell: ‘You have 3 years to build it, and then you have to keep it going - but we’re not going to fund that’ :( #ismbeccb #TT05
358893986259279872 Jul 21 06:19 @KentsisResearch Visit our poster A011 on transposon mapping "Improving Genomic Discovery by Targeted Sequencing and Hybrid Alignment" by Lan Hu at #ismbeccb
358893998934859776 Jul 21 06:19 @sciencestream RT @GigaScience: AK showing easiest way to build xworx Apps is with Taverna & #useglaxy workflows #ISMBECCB #TT07
358894044828958720 Jul 21 06:19 @DNADigest RT @AmyeKenall: #ISMBECCB press meeting: most profound thing to come out of genomics is social: we all come from same place
358894158527725570 Jul 21 06:20 @arneelof Torsten Schwede describing Cameo (we need someone to maintain our http://pcons.net/ #ismbeccb
358894214190735360 Jul 21 06:20 @emblebi RT @Slmorg: Booth complete #ismbeccb ! http://t.co/y73gVMvafW
358894544835719168 Jul 21 06:21 @DNADigest @sjcockell the recurrent problem for funding software and infrastructure. As discussed at #BOSC2013 #ISMBECCB What alternatives are there?
358894549013245952 Jul 21 06:21 @arneelof Torsten Schwede wrongly claims that my method ProQ2 is best. It is not my method it is from my ex student Björn Wallner #ismbeccb
358894861803458564 Jul 21 06:22 @arneelof Suggestion by Torsten: reject all papers that do modeling without including the coordinates #ismbeccb
358895174950191105 Jul 21 06:24 @flowing RT @larsjuhljensen: My BioLink keynote: http://www.slideshare.net/larsjuhljensen/the-pragmatic-text-miner-from-literature-to-electronic-health-records #BioLink #ISMBECCB
358895396531081216 Jul 21 06:25 @sjcockell Q. about app discovery - when you have 500, how can you find what you want? (A. not easily, it seems) #ismbeccb #TT07
358895465258954752 Jul 21 06:25 @arneelof Now lunch then you can talk to me at the "meet the editors" at the @PLOSCompBiol both at 13:45 #ismbeccb
358895537161900033 Jul 21 06:25 @luispedrocoelho Notes on #ISMBECCB Highlights Session (Sunday Morning) http://wp.me/p3tQKn-3H
358895754582032385 Jul 21 06:26 @Chris_Evelo @sjcockell asking people how they select which posters to see at #ismbeccb and implement that as an app, might do what you want ;-)
358896934112604161 Jul 21 06:31 @nskunca I enjoyed Torsten Schwede's talk on validating homology models (3D). Nice use of visuals: started with ce n'est une pipe #ISMBECCB
358897132918415361 Jul 21 06:31 @douglasGerrard4 #Berlin #Sunday #Morning #ismbeccb #Keynotes #Gil Ast and #Goncalo Abecasis
358897759694245888 Jul 21 06:34 @SlnKrg Very nice poster, isn't it? :-) If you want to learn more details about my work, hope to see you tomorrow!! #ISMBECCB http://t.co/bWXkwWfSCg
358897923825737728 Jul 21 06:35 @MyrtleToye From structure to evolution of mutations using a fitness landscape in hiv proteases #ismbeccb
358898071255515136 Jul 21 06:35 @__fortunemovie Gil Ast | "chromatin telling the splicing machinery where axons are" | #ISMBECCB #bioinformatics
358898211936677888 Jul 21 06:36 @StacySlagor Come hear the latest from ISCB and @iscbsc at the open business meeting in Hall 4/5 at 12:45pm #ismbeccb
358898465079705601 Jul 21 06:37 @PLOSCompBiol #ismbeccb Meet @PLOSCompBiol Eds Bjoern Peters, Ruth Nussinov, @arneelof and Marc Marti-Renom – Lunch today (booth13) http://www.plos.org/computational-biology-news/
358899676562870272 Jul 21 06:42 @sciencestream RT @arneelof: Now lunch then you can talk to me at the "meet the editors" at the @PLOSCompBiol both at 13:45 #ismbeccb
358899677741465600 Jul 21 06:42 @sciencestream RT @luispedrocoelho: Notes on #ISMBECCB Highlights Session (Sunday Morning) http://wp.me/p3tQKn-3H
358899679809269760 Jul 21 06:42 @sciencestream RT @Chris_Evelo: @sjcockell asking people how they select which posters to see at #ismbeccb and implement that as an app, might do what you want ;-)
358899683264970753 Jul 21 06:42 @sciencestream RT @SlnKrg: Very nice poster, isn't it? :-) If you want to learn more details about my work, hope to see you tomorrow!! #ISMBECCB http://t.co/bWXkwWfSCg
358899684599164928 Jul 21 06:42 @sciencestream RT @MyrtleToye: From structure to evolution of mutations using a fitness landscape in hiv proteases #ismbeccb
358899685949730816 Jul 21 06:42 @sciencestream RT @__fortunemovie: Gil Ast | "chromatin telling the splicing machinery where axons are" | #ISMBECCB #bioinformatics
358899686989922304 Jul 21 06:42 @sciencestream RT @StacySlagor: Come hear the latest from ISCB and @iscbsc at the open business meeting in Hall 4/5 at 12:45pm #ismbeccb
358899881765011456 Jul 21 06:42 @yaydinson RT @bffo: AK "the most important slide of my talk" #tt07 #ismbeccb http://t.co/BkBrhJj4Oc
358900181711863808 Jul 21 06:44 @RomainStuder RT @arneelof: Suggestion by Torsten: reject all papers that do modeling without including the coordinates #ismbeccb
358900758429073408 Jul 21 06:46 @mattVDiLeo RT @sjcockell: ‘Most bioinformatics software is written by academics’ - you say that like its a bad thing! ;) #ismbeccb #TT07
358900997445259264 Jul 21 06:47 @RomainStuder RT @Feargal_Ryan: So there's over 800 posters at #ISMBECCB Neat.
358901144527335424 Jul 21 06:47 @ISMBECCB RT @StacySlagor: Come hear the latest from ISCB and @iscbsc at the open business meeting in Hall 4/5 at 12:45pm #ismbeccb
358901401197350912 Jul 21 06:48 @Caitlinatron8 #Berlin #Sunday #Morning #ismbeccb #Keynotes #Gil Ast and #Goncalo Abecasis
358901659776598016 Jul 21 06:49 @rtraborn RT @StacySlagor: Come hear the latest from ISCB and @iscbsc at the open business meeting in Hall 4/5 at 12:45pm #ismbeccb
358902095019114499 Jul 21 06:51 @Alexbateman1 @manuelcorpas Congratulations on being elected onto the ISCB Board of Directors! #ISMBECCB
358902601040928768 Jul 21 06:53 @bffo RT @Alexbateman1: @manuelcorpas Congratulations on being elected onto the ISCB Board of Directors! #ISMBECCB
358903292619161600 Jul 21 06:56 @sciencestream RT @Alexbateman1: @manuelcorpas Congratulations on being elected onto the ISCB Board of Directors! #ISMBECCB
358903522374320128 Jul 21 06:57 @Alfons_Valencia ISCB business meeting NOW Room 4/5 (not to confuse with 4 or 5!) Assistance & support needed (lunch -unfortunately- not provided) #ismbeccb
358903787253018624 Jul 21 06:58 @jaumebp @i_am_kilpatrick definitely the comic sans one #ISMBECCB
358904162563538945 Jul 21 06:59 @TippittJason_ Anna Tramontano introducing Gil Ast #ISMBECCB
358904245812072449 Jul 21 07:00 @rtraborn Burkhard Rost giving the 'State of the Society' presentation at the business meeting. ISCB is in a strong position; has challenges #ismbeccb
358904644086808576 Jul 21 07:01 @sciencestream RT @jaumebp: @i_am_kilpatrick definitely the comic sans one #ISMBECCB
358905786694926336 Jul 21 07:06 @xanderpico RT @robinhaw: RT @scedmunds: German lesson at #ISMBECCB: this where the urinals are http://instagram.com/p/cBdyF-APsZ/
358905811847753729 Jul 21 07:06 @Alfons_Valencia Reinhard Schneider. Iscb finances. He was key to build our healthy balance. Congrats! ( he will stay for three years more: good!) #ismbeccb
358906289776107520 Jul 21 07:08 @HotchkissBrain_ Ast #ISMBECCB keynote says that we can predict a priori (from GC content) the mode of splicing (exon defintion vs. intron definition).
358906387784413185 Jul 21 07:08 @sjcockell Lesson for tomorrow - get to lunch earlier #queues #omg #ismbeccb
358907198875107328 Jul 21 07:11 @sciencestream RT @HotchkissBrain_: Ast #ISMBECCB keynote says that we can predict a priori (from GC content) the mode of splicing (exon defintion vs. intron definition).
358907201525923840 Jul 21 07:11 @sciencestream RT @sjcockell: Lesson for tomorrow - get to lunch earlier #queues #omg #ismbeccb
358907727932055552 Jul 21 07:14 @mcaccamo RT @GenomeAnalysis: Next generation of de Bruijn graphs by Sergey at 1410 #ISMBECCB
358907843778715648 Jul 21 07:14 @mcaccamo RT @Alexbateman1: @manuelcorpas Congratulations on being elected onto the ISCB Board of Directors! #ISMBECCB
358907852364464128 Jul 21 07:14 @Alfons_Valencia RT @Alexbateman1: @manuelcorpas Congratulations on being elected onto the ISCB Board of Directors! #ISMBECCB
358908099618701312 Jul 21 07:15 @mcaccamo RT @GenomeAnalysis: TGAC stand ready for #ISMBECCB Come say hi at stand no. 4! http://t.co/HAVzW1uwml
358908857814228992 Jul 21 07:18 @GenomeAnalysis Come take a look at our poster on 'Big data' training programme at 12:15 today! #ISMBECCB http://t.co/S6ahkWvqn8
358909116254679040 Jul 21 07:19 @simon_andrews Just setting up for the bioinfo core workshop at #ISMBECCB. We're in the roof garden right at the top. http://t.co/h4FQkUS5Mi
358909138253787137 Jul 21 07:19 @AidanBudd Yes! Go Manny! RT @Alexbateman1: @manuelcorpas Congratulations on being elected onto the ISCB Board of Directors! #ISMBECCB
358909400687599616 Jul 21 07:20 @mcaccamo RT @GenomeAnalysis: Come take a look at our poster on 'Big data' training programme at 12:15 today! #ISMBECCB http://t.co/S6ahkWvqn8
358909431737630720 Jul 21 07:20 @rtraborn Anupama Jigisha discussed the Student Council, which is doing a tremendous job motivating the next generation of Comp. Biologists #ismbeccb
358909560385728512 Jul 21 07:21 @VickySchneiderG RT @GenomeAnalysis: Come take a look at our poster on 'Big data' training programme at 12:15 today! #ISMBECCB http://t.co/S6ahkWvqn8
358909970831515648 Jul 21 07:22 @Alfons_Valencia Students council awards. Thanks to the sponsors and thanks to the many students making it possible. Amazing organization. #ismbeccb
358910106731171840 Jul 21 07:23 @bffo Student travel awards for attending #ISMBECCB - nice to see @GenomeCanada 's contribution http://t.co/EpGcYRYLL1
358910213619195904 Jul 21 07:23 @sciencestream RT @GenomeAnalysis: Come take a look at our poster on 'Big data' training programme at 12:15 today! #ISMBECCB http://t.co/S6ahkWvqn8
358910215523422208 Jul 21 07:23 @sciencestream RT @simon_andrews: Just setting up for the bioinfo core workshop at #ISMBECCB. We're in the roof garden right at the top. http://t.co/h4FQkUS5Mi
358910458167689217 Jul 21 07:24 @AidanBudd @manuelcorpas @VickySchneiderG gonna have to get yourself one of those prominent black labels for your #ISMBECCB name badge! :)
358910729107144706 Jul 21 07:26 @Alfons_Valencia “@bffo: Student travel awards #ISMBECCB - nice to see @GenomeCanada http://t.co/iLpDlG0wXw” well. Nice to see OUP and others too!
358911083311935488 Jul 21 07:27 @Ronyi22 Gil Ast | "chromatin telling the splicing machinery where axons are" | #ISMBECCB #bioinformatics
358911090123489280 Jul 21 07:27 @bffo .@iscb Student travel awards for attending #ISMBECCB - nice to see @GenomeCanada 's contribution http://t.co/EpGcYRYLL1
358911133014429697 Jul 21 07:27 @PLOSCompBiol RT @arneelof: Now lunch then you can talk to me at the "meet the editors" at the @PLOSCompBiol both at 13:45 #ismbeccb
358911636679036928 Jul 21 07:29 @bffo yes! RT @Alfons_Valencia: “@bffo: Student travel awards #ISMBECCB - nice to see @GenomeCanada” well. Nice to see OUP and others too!
358912399170359296 Jul 21 07:32 @sciencestream RT @AidanBudd: @manuelcorpas @VickySchneiderG gonna have to get yourself one of those prominent black labels for your #ISMBECCB name badge! :)
358912590850060288 Jul 21 07:33 @Alfons_Valencia I lost my tags (eccb speaker iscb etc) This is a personal tragedy. If you find them: A beer is all yours. #ismbeccb
358912846757122048 Jul 21 07:34 @pjacock RT @sjcockell: ‘You have 3 years to build it, and then you have to keep it going - but we’re not going to fund that’ :( #ismbeccb #TT05
358913097773645824 Jul 21 07:35 @chrisftaylor RT @Slmorg: Booth complete #ismbeccb ! http://t.co/y73gVMvafW
358914549950324736 Jul 21 07:41 @Alexbateman1 RT @Alfons_Valencia: I lost my tags (eccb speaker iscb etc) This is a personal tragedy. If you find them: A beer is all yours. #ismbeccb
358915173866037248 Jul 21 07:43 @sciencestream RT @Alfons_Valencia: I lost my tags (eccb speaker iscb etc) This is a personal tragedy. If you find them: A beer is all yours. #ismbeccb
358915768571789312 Jul 21 07:46 @bffo RT @Alfons_Valencia: I lost my tags (eccb speaker iscb etc) This is a personal tragedy. If you find them: A beer is all yours. #ismbeccb
358916992532615168 Jul 21 07:50 @robjbgg Anna Tramontano introducing Gil Ast #ISMBECCB
358917968769458176 Jul 21 07:54 @DNADigest @moorejh same here, and that although I'm sitting in the middle of #ISMBECCB
358918080116047872 Jul 21 07:55 @sciencestream RT @DNADigest: @moorejh same here, and that although I'm sitting in the middle of #ISMBECCB
358918186743242752 Jul 21 07:55 @Slmorg @leelarcombe I have your plos comp biol t-shirt from #ismbeccb! http://t.co/SqEnxdLVYR
358918218498322434 Jul 21 07:55 @moorejh @DNADigest I wanted to go to #ISMBECCB this year but already had too many travel commitments.
358918549349212160 Jul 21 07:57 @tgjraymond My poster on detecting polyA tails in denovo assemblies. #ismbeccb #g15 http://t.co/D4pBtMJaEp
358918593364234240 Jul 21 07:57 @larsjuhljensen RT @Alfons_Valencia: I lost my tags (eccb speaker iscb etc) This is a personal tragedy. If you find them: A beer is all yours. #ismbeccb
358919031178276864 Jul 21 07:59 @larsjuhljensen RT @sjcockell: Lesson for tomorrow - get to lunch earlier #queues #omg #ismbeccb
358919501003231233 Jul 21 08:00 @StacySlagor Thank you @GenomeCanada @NICTA @ISBSIB for sponsoring ISCB Student Council Symposium travel fellowships #ismbeccb
358920082636173312 Jul 21 08:03 @sciencestream RT @Slmorg: @leelarcombe I have your plos comp biol t-shirt from #ismbeccb! http://t.co/SqEnxdLVYR
358920083575672832 Jul 21 08:03 @sciencestream RT @moorejh: @DNADigest I wanted to go to #ISMBECCB this year but already had too many travel commitments.
358920084435513344 Jul 21 08:03 @sciencestream RT @tgjraymond: My poster on detecting polyA tails in denovo assemblies. #ismbeccb #g15 http://t.co/D4pBtMJaEp
358920085333098496 Jul 21 08:03 @sciencestream RT @StacySlagor: Thank you @GenomeCanada @NICTA @ISBSIB for sponsoring ISCB Student Council Symposium travel fellowships #ismbeccb
358920231324237824 Jul 21 08:03 @Feargal_Ryan RT @CLCbio: BLAST the unknown! We're handing out these cool and free t-shirts in the lunch break tomorrow. #ismbeccb http://t.co/Nr8kbKa6hv
358920386244657153 Jul 21 08:04 @laxvid Humanized animals models may be the way to go.. blanket mice .ne. animal is oversimmplificcation #ISMBECCB
358921079164633088 Jul 21 08:07 @StacySlagor Several of 2013 Student Council Symposium and #ismbeccb student travel fellowship awardees! Thanks to all sponsors! http://t.co/i3RPVoGO3y
358921118314283008 Jul 21 08:07 @i_am_kilpatrick Just picked up flyer & luggage tag from the nice folks at #ECCB2014 stand: it'll be in Strasbourg, they're promising champagne ;) #ISMBECCB
358921546565292033 Jul 21 08:08 @PLOSCompBiol Finished lunch? Head over to Hall 15.2 at #ismbeccb for more late breaking research with @maricelkann!
358921599082176512 Jul 21 08:09 @i_am_kilpatrick Next up: DRIMust web server for discovering rank imbalanced motifs using suffix trees #TT08 #ISMBECCB
358921760776794114 Jul 21 08:09 @team_myGrid At #WK02 Bioinformatics Cores Workshop at #ISMBECCB
358921981175296000 Jul 21 08:10 @sciencestream RT @laxvid: Humanized animals models may be the way to go.. blanket mice .ne. animal is oversimmplificcation #ISMBECCB
358921989614215168 Jul 21 08:10 @sciencestream RT @StacySlagor: Several of 2013 Student Council Symposium and #ismbeccb student travel fellowship awardees! Thanks to all sponsors! http://t.co/i3RPVoGO3y
358922026255663104 Jul 21 08:10 @sciencestream RT @PLOSCompBiol: Finished lunch? Head over to Hall 15.2 at #ismbeccb for more late breaking research with @maricelkann!
358922035252441088 Jul 21 08:10 @sciencestream RT @i_am_kilpatrick: Next up: DRIMust web server for discovering rank imbalanced motifs using suffix trees #TT08 #ISMBECCB
358922044656091136 Jul 21 08:10 @sciencestream RT @team_myGrid: At #WK02 Bioinformatics Cores Workshop at #ISMBECCB
358922175975129088 Jul 21 08:11 @bffo .@Alfons_Valencia here is the award for best student poster from Bioinformatics @OUPAcademic #ISMBECCB @iscbsc http://t.co/kuQigrmZj2
358922301418385408 Jul 21 08:11 @iddux Doron Lancet introducing Bioinformatics and disease. #ISMBECCB
358922357739491328 Jul 21 08:12 @i_am_kilpatrick Well deserved, was a great talk at #SCS. MT @bffo: award for best student poster from Bioinformatics #ISMBECCB http://twitter.com/bffo/status/358921368928124929/photo/1
358922439608115200 Jul 21 08:12 @laxvid #ISMBECCB #bioinfo-core meeting Come join us on the discussion
358922808543678464 Jul 21 08:14 @arneelof RT @Alfons_Valencia: I lost my tags (eccb speaker iscb etc) This is a personal tragedy. If you find them: A beer is all yours. #ismbeccb
358922811353473026 Jul 21 08:14 @janosbinder Warren Kibbe talks about the Disease Ontology #ISMBECCB
358922826956275712 Jul 21 08:14 @iddux Warren Kibbe On Human Disease Ontology. 8,000 diseases! #ISMBECCB Hall 1
358922912105254912 Jul 21 08:14 @danmaclean RT @GenomeAnalysis: Come take a look at our poster on 'Big data' training programme at 12:15 today! #ISMBECCB http://t.co/S6ahkWvqn8
358922916466929666 Jul 21 08:14 @AlonKeinan MalaCards: integrated database of human disease, combining dozens of datasets out there (incl. OMIM) http://www.malacards.org #ISMBECCB
358923104577257474 Jul 21 08:15 @dagmarwaltemath Secur staff member sitting in front of me is v interested in the talk on DO. Confused ontology w oncology though. Still: nice :-) #ismbeccb
358923107446579200 Jul 21 08:15 @sciencestream RT @iddux: Doron Lancet introducing Bioinformatics and disease. #ISMBECCB
358923109057183744 Jul 21 08:15 @sciencestream RT @i_am_kilpatrick: Well deserved, was a great talk at #SCS. MT @bffo: award for best student poster from Bioinformatics #ISMBECCB http://t.co/m4Ks6UtwEi
358923160361500672 Jul 21 08:15 @sjcockell At the bioinformatics core workshop session - integrative analysis starts us off #ismbeccb #WK02 #lovethecore
358923292230426625 Jul 21 08:15 @GenomeAnalysis RT @Alexbateman1: @manuelcorpas Congratulations on being elected onto the ISCB Board of Directors! #ISMBECCB
358923373331496961 Jul 21 08:16 @bffo Wish I was there, and a couple of other places! RT @iddux: Warren Kibbe On Human Disease Ontology. 8,000 diseases! #ISMBECCB Hall 1
358923373763506177 Jul 21 08:16 @iddux Nice shout out for CAFA from Doron Lancet. #AFP13 #ISMBECCB http://biofunctionprediction.org
358923438750453760 Jul 21 08:16 @SlnKrg RT @iddux: Warren Kibbe On Human Disease Ontology. 8,000 diseases! #ISMBECCB Hall 1
358923462250725378 Jul 21 08:16 @frank_foerster #ISMBECCB #PP14 Identifying deferentially expressed transcripts from RNA-seq data with biological variation
358923881446256640 Jul 21 08:18 @iddux RT @RomainStuder: "Today I got my first poster award !!! \o/ Thanks ! #AFP13 #ISMBECCB" <-- Well deserved!!!
358924220749074432 Jul 21 08:19 @SlnKrg RT @iddux: I've just been informed that the official tag for ISMB 2013 is #ISMBECCB. If you use another tag, we won't visit your poster :)
358924278856572928 Jul 21 08:19 @Hoellenmotte #ismbeccb Peter Glaus on Alternative Transcript abundance estimation using Bayesian Modeling in Hall 14.2 http://t.co/IiTLLXxB3D
358924309747601408 Jul 21 08:19 @vangos In Hall 15.2, listening to @maricelkann speaking about yeast and human phenotypically relevant mutations. #ISMBECCB
358924327372066817 Jul 21 08:20 @rtraborn RT @Hoellenmotte: #ismbeccb Peter Glaus on Alternative Transcript abundance estimation using Bayesian Modeling in Hall 14.2 http://t.co/IiTLLXxB3D
358924552996265985 Jul 21 08:20 @paul_r_fisher Mapping the strategies of viruses hijacking human host cells #ismbeccb #pp12 nice plot of viruses hitting human proteins
358924572734656514 Jul 21 08:21 @Chris_Evelo @sjcockell quite a few nice restaurants close by might be better than the lunch queues in the ICC #ismbeccb
358924808668459009 Jul 21 08:21 @i_am_kilpatrick DRIMust unique amongst motif discovery algorithms in dealing with ranked lists of input sequences #ISMBECCB #TT08
358925509045923842 Jul 21 08:24 @AlbertErives RT @arneelof: We can characterise 60% of the human proteome but 30% is disordered so not much (soluble) is left to predict #ismbeccb
358925602973167617 Jul 21 08:25 @hcorrada Speaking about anti-profiles in 15 mins. #ISMBECCB
358925663392116736 Jul 21 08:25 @MollyBright2_ Gil Ast | "chromatin telling the splicing machinery where axons are" | #ISMBECCB #bioinformatics
358925778454446080 Jul 21 08:25 @janosbinder Warren Kibbe's Phenomizer can look up phenotypes of a diseases in OMIM #ISMBECCB
358925896969101312 Jul 21 08:26 @sciencestream RT @sjcockell: At the bioinformatics core workshop session - integrative analysis starts us off #ismbeccb #WK02 #lovethecore
358925898256773120 Jul 21 08:26 @sciencestream RT @bffo: Wish I was there, and a couple of other places! RT @iddux: Warren Kibbe On Human Disease Ontology. 8,000 diseases! #ISMBECCB Hall 1
358925899275980800 Jul 21 08:26 @sciencestream RT @iddux: Nice shout out for CAFA from Doron Lancet. #AFP13 #ISMBECCB http://biofunctionprediction.org
358926021023633409 Jul 21 08:26 @rtraborn Glaus: Bitseq finds differential expression of RNA-seq reads from different biological conditions using a Gaussian model #PP14 #ismbeccb
358926151341076480 Jul 21 08:27 @AlbertErives RT @arneelof: Ceci n'est pas un protein (it is a model) #ismbeccb
358926280672030721 Jul 21 08:27 @SlnKrg I have a poster presentation tomorrow. Hope to see you! #ISMBECCB http://t.co/YefvGjZpdX
358926351396376576 Jul 21 08:28 @EDNACEDO RT @emblebi: Interested in online training? Visit @emblebi at booth 6 for a free 'love data' mouse mat or screen cloth! #ISMBECCB
358926406702473217 Jul 21 08:28 @EDNACEDO RT @Slmorg: Booth complete #ismbeccb ! http://t.co/y73gVMvafW
358926516740030464 Jul 21 08:28 @sjcockell Interesting motif browser tool from ENCODE: http://www.broadinstitute.org/~pouyak/motif-disc/human/ #ismbeccb #WK02
358926686395432960 Jul 21 08:29 @anilthanki RT @GenomeAnalysis: Come take a look at our poster on 'Big data' training programme at 12:15 today! #ISMBECCB http://t.co/S6ahkWvqn8
358927002469810177 Jul 21 08:30 @i_am_kilpatrick DRIMust at least 16x faster for DNA motif discovery than MEME, DREME, XXmotif! #ISMBECCB #TT08
358927094060822528 Jul 21 08:31 @AlonKeinan WK: Together with eMERGE, used Disease Ontology to mine the 2M patients in i2b2 to find 2200 with Diabetic Retinopathy #ismbeccb #SS02
358927476921479168 Jul 21 08:32 @markwassy RT @iddux: RT @RomainStuder: "Today I got my first poster award !!! \o/ Thanks ! #AFP13 #ISMBECCB" <-- Well deserved!!!
358927504582909952 Jul 21 08:32 @jjspr Kely Norel is going to present #sbvimprover in hall 9 at 14:40 minutes, #ismbeccb
358927542948225024 Jul 21 08:32 @froggleston RT @GenomeAnalysis: Come take a look at our poster on 'Big data' training programme at 12:15 today! #ISMBECCB http://t.co/S6ahkWvqn8
358927734929494017 Jul 21 08:33 @Chris_Evelo WK: if you use animal models to study human disease you should annotate the studies with the human disease (ontology terms). #ismbeccb@#ss02
358927775672975361 Jul 21 08:33 @jmchilton At the bioinformatics core facilities workshop. #ISMBECCB
358927968065683456 Jul 21 08:34 @METUSNP #ISMBECCB To get water at a regular price turn right and pass the bridge just outside the ICC. It is for .80 cents at the corner shop.
358928083484540928 Jul 21 08:34 @yaydinson RT @METUSNP: #ISMBECCB To get water at a regular price turn right and pass the bridge just outside the ICC. It is for .80 cents at the corner shop.
358928172114395136 Jul 21 08:35 @sjcockell Suraj Menon giving core facility perspective on data integration - time limited, reactive enquiries in core setting #ismbeccb #WK02
358928174681292801 Jul 21 08:35 @froggleston Bioinformatics core workshop up next. Integrative analysis in the roof garden lobby. Not the actual roof garden. Boo. #ismbeccb
358928255182581763 Jul 21 08:35 @i_am_kilpatrick "Variable gap motifs interesting but not particularly widespread" #ISMBECCB #TT08
358928270433075200 Jul 21 08:35 @Chris_Evelo RT @METUSNP: #ISMBECCB To get water at a regular price turn right and pass the bridge just outside the ICC. 80 cents at the corner shop.
358928313030414336 Jul 21 08:35 @janosbinder Alan F. Scott talks about OMIM in Hall 1 #ISMBECCB
358928530454757376 Jul 21 08:36 @sjcockell Let’s all agree not to use the phrase “across ‘omes”, k? #ismbeccb #WK02
358928659509288960 Jul 21 08:37 @iddux Next up: OMIM. http://www.omim.org/ Allan F. Scott. Bioinformatics & Disease #ISMBECCB
358928699053187074 Jul 21 08:37 @vangos . @maricelkann: Significant portion of yeast hotspots map to same functional region as known disease-associated mutation in humans #ISMBECCB
358928721228480512 Jul 21 08:37 @Chris_Evelo RT @iddux: Next up: OMIM. http://www.omim.org/ Allan F. Scott. Bioinformatics & Disease #ISMBECCB
358928730544021505 Jul 21 08:37 @janosbinder Impressive: OMIM exists since 1966! #ISMBECCB
358928783253848065 Jul 21 08:37 @sjcockell Priorities of a funded core very different to those of a self-sustaining facility #ismbeccb #WK02
358928975856287744 Jul 21 08:38 @froggleston @sjcockell #ismbeccb #WK02 OK. How about crossomics? ;) It can go on @BioMickWatson 's "list".
358929053929062401 Jul 21 08:38 @AlonKeinan Alan Scott on OMIM (Online Mendelian Inheritance in Man) http://omim.org/ #ismbeccb #SS02B
358929066206199808 Jul 21 08:38 @SlnKrg RT @METUSNP: #ISMBECCB To get water at a regular price turn right and pass the bridge just outside the ICC. It is for .80 cents at the corner shop.
358929146556055552 Jul 21 08:39 @iddux OMIM has been around since 1966! No genes in OMIM's early editions, since that was Before Cloning (BC era). #ISMBECCB
358929239115968512 Jul 21 08:39 @larsjuhljensen RT @iddux: OMIM has been around since 1966! No genes in OMIM's early editions, since that was Before Cloning (BC era). #ISMBECCB
358929273949663232 Jul 21 08:39 @i_am_kilpatrick Very interesting talk, pity not enough time for more questions #ISMBECCB #TT08
358929565676085251 Jul 21 08:40 @paul_r_fisher Gene expression anti-profiles as a basis for accurate universal cancer signatures #pp16 #ismbeccb
358929659033305088 Jul 21 08:41 @Hoellenmotte RT @bffo: .@Alfons_Valencia here is the award for best student poster from Bioinformatics @OUPAcademic #ISMBECCB @iscbsc http://t.co/kuQigrmZj2
358929775240708096 Jul 21 08:41 @AlbertErives RT @ISMBECCB: Welcome to ISMB/ECCB 2013! The official conference hashtag is #ismbeccb. Check out the conference schedule at http://t.co/3QHAIMF74r.
358929874485907458 Jul 21 08:42 @vangos Next in 15.2: Andrew Bordner on Predicting the biochemical consequences of missense mutations using genome wide homology modeling. #ISMBECCB
358929876960555008 Jul 21 08:42 @janosbinder OMIM has 21,848 entries by today #ISMBECCB #SS02B
358929911341268993 Jul 21 08:42 @vangos RT @ISMBECCB: Welcome to ISMB/ECCB 2013! The official conference hashtag is #ismbeccb. Check out the conference schedule at http://t.co/3QHAIMF74r.
358929947127062528 Jul 21 08:42 @frank_foerster #ISMBECCB #PP17 Gene Scissors:A comp. approach to detecting and correcting spurious transcriptome inference due to RNAseq reads misalignment
358930004995866624 Jul 21 08:42 @iddux OMIM gets ~40K unique users/week. http://omim.org #ISMBECCB
358930066337566721 Jul 21 08:42 @jonathancairns RT @Chris_Evelo: RT @METUSNP: #ISMBECCB To get water at a regular price turn right and pass the bridge just outside the ICC. 80 cents at the corner shop.
358930619343966210 Jul 21 08:45 @vangos Presenting my #ISMBECCB poster #O120 "Modeling cellular ROS defense in mitochondrial-related diseases" on Tuesday: http://www.slideshare.net/vangos7/ismb13-poster-o120-modeling-cellular
358930849200214017 Jul 21 08:45 @Alexbateman1 Really like the feature in OMIM that will google translate for you see top right of page: http://www.omim.org/ #ISMBECCB
358930891881840640 Jul 21 08:46 @iddux RT @Alexbateman1: Really like the feature in OMIM that will google translate for you see top right of page: http://www.omim.org/ #ISMBECCB
358931045904687105 Jul 21 08:46 @RomainStuder @iddux Thanks Iddo. :D #AFP13 #ISMBECCB
358931443403464704 Jul 21 08:48 @cagdason RT @METUSNP: #ISMBECCB To get water at a regular price turn right and pass the bridge just outside the ICC. It is for .80 cents at the corner shop.
358931632813654017 Jul 21 08:49 @Chris_Evelo OMIM hosted at UCSC and well integrated in UCSC genome browser, from disease region to genes (or regulatory motifs) in that region #ismbeccb
358931721498415104 Jul 21 08:49 @SlnKrg RT @Alexbateman1: Really like the feature in OMIM that will google translate for you see top right of page: http://www.omim.org/ #ISMBECCB
358931733011365888 Jul 21 08:49 @sjcockell It’s *always* a bunch of dodgy perl scripts #ismbeccb #WK02
358931819560845312 Jul 21 08:49 @RomainStuder Here is a snapshot of the poster I will present tomorrow (L075). I will also put it on F1000 too. #AFP13 #ISMBECCB http://t.co/JVgbDyFWrC
358931832286363649 Jul 21 08:49 @jjspr Diagnostic signature challenge, learnings from the 1st #sbvimprover challenge. #ismbeccb 54 submissions
358931998087188480 Jul 21 08:50 @sjcockell Bunch of dodgy (documented) Perl scripts > commercial pipeline tool #ismbeccb #WK02
358932048590811137 Jul 21 08:50 @AlonKeinan Impressive that 712OMIM entries are still being changed and/or added montly #ismbeccb #SS02B
358932064944812032 Jul 21 08:50 @SlnKrg RT @Feargal_Ryan: So there's over 800 posters at #ISMBECCB Neat.
358932158448435200 Jul 21 08:51 @sciencestream RT @sjcockell: Let’s all agree not to use the phrase “across ‘omes”, k? #ismbeccb #WK02
358932253381894144 Jul 21 08:51 @AlonKeinan RT @iddux: OMIM has been around since 1966! No genes in OMIM's early editions, since that was Before Cloning (BC era). #ISMBECCB
358932306964135939 Jul 21 08:51 @SahaSurya MT @iddux: OMIM has been around since 1966! Now gets ~40K unique users/week. http://omim.org #ISMBECCB
358932398517403649 Jul 21 08:52 @froggleston The world is less fortunate than a core facility in Singapore, apparently. #ismbeccb #WK02 
358932810284810241 Jul 21 08:53 @Alexbateman1 OMIM has an API :-D It really has changed in the last couple of years! #ISMBECCB #goodwork
358932924512477184 Jul 21 08:54 @larsjuhljensen RT @Alexbateman1: OMIM has an API :-D It really has changed in the last couple of years! #ISMBECCB #goodwork
358932931122708480 Jul 21 08:54 @AlonKeinan OMIM been independent from NCBI for couple years, which allowed adding features such as gene symbol and coordinates #ismbeccb #SS02B
358932940736040960 Jul 21 08:54 @Chris_Evelo RT @Alexbateman1: OMIM has an API :-D It really has changed in the last couple of years! #ISMBECCB #goodwork
358933022445281280 Jul 21 08:54 @jjspr Endpoints/phenotype were the biggest determinants in the diagnostic signature challenge #sbvimprover #ismbeccb
358933059594235906 Jul 21 08:54 @froggleston There are git repo solutions that you can run internally that aren't github, e.g. @GenomeAnalysis uses @atlassian Stash #WK02 #ismbeccb
358933095799468033 Jul 21 08:54 @RomainStuder Very interesting talk of Andrew Bordner: Predicting the consequences of missense mutations using genome wide homology modeling. #ISMBECCB
358933440642949120 Jul 21 08:56 @DNADigest RT @Alexbateman1: OMIM has an API :-D It really has changed in the last couple of years! #ISMBECCB #goodwork
358933464693104640 Jul 21 08:56 @sciencestream RT @SahaSurya: MT @iddux: OMIM has been around since 1966! Now gets ~40K unique users/week. http://omim.org #ISMBECCB
358933582691459072 Jul 21 08:56 @spitshine .@aidanbudd http://ow.ly/i/2FkkR no #ISMBECCB for me this year
358933757773877249 Jul 21 08:57 @RomainStuder Nice to be in a room (15.2) with good WIFI signal. #ISMBECCB
358933888036376576 Jul 21 08:58 @RomainStuder SKEMPI: Structual database of Kinetics and Energetics of Mutant Protein Interactions http://life.bsc.es/pid/mutation_database/ #ISMBECCB
358933926674313216 Jul 21 08:58 @Alexbateman1 I have to fill out a license request online to use the OMIM API :-( http://www.omim.org/api Please remove that requirement! #ISMBECCB
358933981112184832 Jul 21 08:58 @Alfons_Valencia SBV-Improver talk. Open evaluation of disease phenotype prediction using expression data, includes transference between species #ISMBECCB
358934015409397760 Jul 21 08:58 @jjspr Aggregating methods for predictions do the trick, see „one score fits all“ quote from Torsten Schwede’s talk. #sbvimprover #ismbeccb
358934082723381248 Jul 21 08:58 @RomainStuder Domain Mappings of Disease Mutations: http://bioinf.umbc.edu/dmdm from Kann's lab #ISMBECCB
358934213933809665 Jul 21 08:59 @jonathancairns #ISMBECCB #PP17 "GeneScissors" solves RNA-seq multiple alignment issues by estimating which genes are expressed, and moving reads there
358934253801066496 Jul 21 08:59 @DNADigest RT @SahaSurya: MT @iddux: OMIM has been around since 1966! Now gets ~40K unique users/week. http://omim.org #ISMBECCB
358934360826716160 Jul 21 08:59 @jmchilton "If [a perl script] is well documented it is not dodgy." Hmmm... documentation is important, but all perl is dodgy. #ISMBECCB
358945080989589505 Jul 21 09:42 @GigaScience [correction] BioJS is more data representation than data visualization #ISMBECCB #PP22
358945182948929536 Jul 21 09:42 @iysik_com Starting to get annoyed by the #ISMBECCB acronym. @iysik_com
358945245318230016 Jul 21 09:43 @jonathancairns #ISMBECCB #PP23 Polyadenylation procedures can remove the end of a transcript, e.g. removing an miRNA binding site, encouraging translation
358945254432456705 Jul 21 09:43 @Chris_Evelo Johan ten Dunnen, sharing well annotated gene variant/phenotype information makes all information much more valuable #ismbeccb #ss02
358945421508358144 Jul 21 09:43 @rtraborn Up now Dina Hafez is presenting 'Genome-wide identification & predictive modeling of tissue-specific alternative polyadenylation' #ismbeccb
358945519717974016 Jul 21 09:44 @sjcockell Am I missing something? This doesn’t seem to have a lot to do with project tracking & reporting… #ismbeccb #WK02
358945727088574465 Jul 21 09:45 @yaydinson RT @Alexbateman1: OMIM has an API :-D It really has changed in the last couple of years! #ISMBECCB #goodwork
358945856742883328 Jul 21 09:45 @rtraborn PA-seq is a new technique developed by Hafez' collaborators. It captures the 3' end of mRNAs, getting poly-adenlyation sites (PA). #ismbeccb
358946018181660672 Jul 21 09:46 @Chris_Evelo JtD describes Mutalyzer function finding genes for variant regions Iwhy not use UCSC browser here too?) #ISMBECCB #ss02
358946375209189376 Jul 21 09:47 @frank_foerster @manuelcorpas is talking about BioJS a JavaScript framework for data visualization #ISMBECCB #PP22
358946553655869441 Jul 21 09:48 @GigaScience MC: purpose of BioJS to help create, use & share JavaScript components. Currently 29 components in their registry #PP22 #ISMBECCB
358946651311837185 Jul 21 09:48 @jonathancairns #ISMBECCB #PP23 Hmm, (IMO) slightly dodgy linear model approach where differential polyA sites are captured with large residuals
358946656433082369 Jul 21 09:48 @AlonKeinan Johan den Dunnen on gene variant databases. http://www.hgvs.org/ by the Human Genome Variation Society #ismbeccb #SS02D
358946895864934400 Jul 21 09:49 @jonathancairns #ISMBECCB #PP23 I would suggest a Lasso-style sparse regression approach
358946989385342976 Jul 21 09:50 @Alfons_Valencia Jt den dunnen. Why he started collecting human variants in DBs #ISMBECCB http://t.co/4MbD42Mn0J
358947065906216960 Jul 21 09:50 @Chris_Evelo RT @Alfons_Valencia: Jt den dunnen. Why he started collecting human variants in DBs #ISMBECCB http://t.co/9VaV7bcS3F
358947728119697408 Jul 21 09:53 @jmchilton Any #BOSC2013-y or open source nerds still around have plans for dinner? #ISMBECCB
358947830964027394 Jul 21 09:53 @GigaScience MC using the showcase functionality to show us some examples such as ExpressionAtlas http://www.ebi.ac.uk/Tools/biojs/registry/Biojs.ExpressionAtlasBaselineSummary.html #PP22 #ISMBECCB
358948074997428224 Jul 21 09:54 @froggleston Accurate description of scripts, tools and pipelines is completely essential for reproducible research, not an afterthought. #wk02 #ismbeccb
358948255306358784 Jul 21 09:55 @sciencestream RT @Chris_Evelo: Anyone blogging #ismbeccb who could use? MT @iysik_com: have R scripts from last year (but only when I don't have to run them).
358948267843125248 Jul 21 09:55 @JonathanCFuller @JonathanCFuller: Nice overview of bioJS from @manuelcorpas - wish I'd found it earlier! #ISMBECCB
358948357789581312 Jul 21 09:55 @jonathancairns #ISMBECCB #PP23 Speaker says method underperforms in low coverage regions compared to entropy. I am not surprised - see previous tweets.
358948448206192641 Jul 21 09:55 @SahaSurya MT @GigaScience: @manuelcorpas: purpose of BioJS is to create/use/share JavaScript components. Curr 29 compo. in registry #PP22 #ISMBECCB
358948726057873410 Jul 21 09:56 @AlonKeinan RT @GenomeAnalysis: Come take a look at our poster on 'Big data' training programme at 12:15 today! #ISMBECCB http://t.co/S6ahkWvqn8
358948916634845184 Jul 21 09:57 @Hoellenmotte RT @jonathancairns: #ISMBECCB #PP23 Hmm, (IMO) slightly dodgy linear model approach where differential polyA sites are captured with large residuals
358949015745863680 Jul 21 09:58 @xanderpico Biojs standardizes code structure and docs for interoperable, reusable JavaScript components in bioinformatics #ismbeccb
358949025380171777 Jul 21 09:58 @GigaScience MC why use BioJS? Share & get credit for your work. Common visualization. Enhance visibility of widgets. #PP22 #ISMBECCB
358949213062709248 Jul 21 09:58 @jonathancairns #ISMBECCB #PP23 Anyway, my pedantry aside, Dina has retrieved tissue-specific polyA motifs, which is pretty cool.
358949413164556288 Jul 21 09:59 @sciencestream RT @JonathanCFuller: @JonathanCFuller: Nice overview of bioJS from @manuelcorpas - wish I'd found it earlier! #ISMBECCB
358949631780061184 Jul 21 10:00 @rtraborn Hefez's linear model was able to distinguish brain-specific regulated pA sites from constitutive ones, performed well here. #ismbeccb #PP23
358949917156319233 Jul 21 10:01 @jmchilton Funny, true comments (in summary): No one is going to the library for books so they should be storing our data #ISMBECCB #alsotheyhavecoffee
358950139789979648 Jul 21 10:02 @froggleston "Invoice of the bill is the end of the project" "You don't take Q's after?" "No" Academic collabs are world apart it seems #WK02 #ismbeccb 
358950732365438980 Jul 21 10:04 @Janis3_14159 RT @RomainStuder: Domain Mappings of Disease Mutations: http://bioinf.umbc.edu/dmdm from Kann's lab #ISMBECCB
358950736756883456 Jul 21 10:04 @Chris_Evelo JtD: please upload your variant data to LOVD immediately, or send them or start a new instance. #ISMBECCB #ss02
358950994400378880 Jul 21 10:06 @sjcockell @froggleston collaboration is easy if there’s a grant in place. Charging by the hour it gets v. hard. World isn’t perfect #ismbeccb #WK02
358951021151649792 Jul 21 10:06 @jmchilton Poll: Even split in the room between people in cores that attempt to recoup some costs and those that have no cost recovery. #ISMBECCB
358951136503398403 Jul 21 10:06 @rtraborn Hafez is in Uwe Ohler's group at Duke. I wonder if he comes to ISMB, because I find his work really interesting. #ismbeccb
358951192287657984 Jul 21 10:06 @yaydinson #ISMBECCB Adopt your favorite gene and become its foster curator at LOVD http://www.lovd.nl/3.0/home.
358951222629662720 Jul 21 10:06 @sjcockell Really interesting discussion - wish I worked in a fully funded core #ismbeccb
358951272809889792 Jul 21 10:07 @lenovere 20% off "computational systems neurobiology" at #ismbeccb #springer booth. Good book :-)
358951546161070080 Jul 21 10:08 @froggleston Disappointed at complete lack of discussion about tracking in core workshop. Back to the yearly cost recovery chestnuts. #WK02 #ismbeccb 
358952031161434112 Jul 21 10:10 @sciencestream RT @jmchilton: Funny, true comments (in summary): No one is going to the library for books so they should be storing our data #ISMBECCB #alsotheyhavecoffee
358952034231676928 Jul 21 10:10 @sciencestream RT @Chris_Evelo: JtD: please upload your variant data to LOVD immediately, or send them or start a new instance. #ISMBECCB #ss02
358953094396133377 Jul 21 10:14 @tehancocks Bioinfo tool developer? Is your tool in the BioMedBridges registry? Check at Booth 8 #ISMBECCB
358953284339777536 Jul 21 10:15 @sciencestream RT @tehancocks: Bioinfo tool developer? Is your tool in the BioMedBridges registry? Check at Booth 8 #ISMBECCB
358955756281806849 Jul 21 10:24 @sevgisiir RT @yaydinson: #ISMBECCB Adopt your favorite gene and become its foster curator at LOVD http://www.lovd.nl/3.0/home.
358955855942647810 Jul 21 10:25 @i_am_kilpatrick Keep on ending up in different places even though I'm certain it's the same escalator. Maybe I'm going mad... #ISMBECCB
358956032770723840 Jul 21 10:26 @DNADigest RT @AmyeKenall: Reproducibility unrealistic? Esp with long term projects and never ending software updates? #ISMBECCB
358956106426888192 Jul 21 10:26 @Feargal_Ryan RT @i_am_kilpatrick: Keep on ending up in different places even though I'm certain it's the same escalator. Maybe I'm going mad... #ISMBECCB
358956332013334528 Jul 21 10:27 @sciencestream RT @i_am_kilpatrick: Keep on ending up in different places even though I'm certain it's the same escalator. Maybe I'm going mad... #ISMBECCB
358956340565528576 Jul 21 10:27 @DNADigest RT @JonathanCFuller: @JonathanCFuller: Nice overview of bioJS from @manuelcorpas - wish I'd found it earlier! #ISMBECCB
358956407582126080 Jul 21 10:27 @DNADigest RT @jmchilton: Funny, true comments (in summary): No one is going to the library for books so they should be storing our data #ISMBECCB #alsotheyhavecoffee
358956495792533504 Jul 21 10:27 @DNADigest RT @Chris_Evelo: JtD: please upload your variant data to LOVD immediately, or send them or start a new instance. #ISMBECCB #ss02
358956928908529665 Jul 21 10:29 @Feargal_Ryan #ISMBECCB has been surprisingly fun. Not what I expected from my first conference
358957418870358016 Jul 21 10:31 @sjcockell ICC Berlin. A conference centre designed by M C Escher #ismbeccb
358957513963618305 Jul 21 10:31 @AlonKeinan As well-deserved as it gets: Overton Prize awarded to @gabecasis. His lecture on insights from seq 1000s human genomes shortly #ismbeccb
358957550584475648 Jul 21 10:32 @Feargal_Ryan RT @sjcockell: ICC Berlin. A conference centre designed by M C Escher #ismbeccb
358957645296062464 Jul 21 10:32 @sciencestream RT @Feargal_Ryan: #ISMBECCB has been surprisingly fun. Not what I expected from my first conference
358957647397392384 Jul 21 10:32 @sciencestream RT @sjcockell: ICC Berlin. A conference centre designed by M C Escher #ismbeccb
358958231114104832 Jul 21 10:34 @AlonKeinan Me too, this place is crazy MT @i_am_kilpatrick Keep on ending up in different places even though certain it's the same escalator. #ISMBECCB
358959029055262723 Jul 21 10:37 @zetieum very nice talk of Inna Kuperstein at #ISMBECCB refreshing the concept of synthetic lethality. #PP21
358959091814637568 Jul 21 10:38 @WonderMixTape #KN2 Goncalo Abecasis "Insights from Sequencing Thousands of Human Genomes" http://tinyurl.com/lkxpv5a #ISMBECCB
358959196693204992 Jul 21 10:38 @Chris_Evelo 2 tweets combined: ICC Berlin. A conference centre designed by MC Escher #ismbeccb You keep on ending in different places using same stairs
358959417930158080 Jul 21 10:39 @Chris_Evelo RT @WonderMixTape: #KN2 Goncalo Abecasis "Insights from Sequencing Thousands of Human Genomes" http://tinyurl.com/lkxpv5a #ISMBECCB
358960107851218948 Jul 21 10:42 @jonathancairns RT @Chris_Evelo: 2 tweets combined: ICC Berlin. A conference centre designed by MC Escher #ismbeccb You keep on ending in different places using same stairs
358960138209607681 Jul 21 10:42 @larsjuhljensen Dear @ISMBECCB you run out of coffee in every coffee break. Get it sorted out. Bioinformatician-Coffee=Grumpy #ISMBECCB
358960207151763457 Jul 21 10:42 @sciencestream RT @zetieum: very nice talk of Inna Kuperstein at #ISMBECCB refreshing the concept of synthetic lethality. #PP21
358960210117148672 Jul 21 10:42 @sciencestream RT @WonderMixTape: #KN2 Goncalo Abecasis "Insights from Sequencing Thousands of Human Genomes" http://tinyurl.com/lkxpv5a #ISMBECCB
358960220607098880 Jul 21 10:42 @sciencestream RT @larsjuhljensen: Dear @ISMBECCB you run out of coffee in every coffee break. Get it sorted out. Bioinformatician-Coffee=Grumpy #ISMBECCB
358960222473158657 Jul 21 10:42 @frank_foerster @gabecasis will talk about insights from sequencing thousands of human genomes #ISMBECCB #KN2
358960309223948288 Jul 21 10:43 @tehancocks You found the tessellating frogs too? RT @sjcockell: ICC Berlin. A conference centre designed by M C Escher #ismbeccb
358960326655483905 Jul 21 10:43 @yaydinson RT @Chris_Evelo: 2 tweets combined: ICC Berlin. A conference centre designed by MC Escher #ismbeccb You keep on ending in different places using same stairs
358960475100291072 Jul 21 10:43 @WonderMixTape #KN2 : Intro for GA - author of several of the most downloaded papers in journal #Bioinformatics #ISMBECCB
358960561444638720 Jul 21 10:44 @xanderpico RT @Chris_Evelo: 2 tweets combined: ICC Berlin. A conference centre designed by MC Escher #ismbeccb You keep on ending in different places using same stairs
358960747616813056 Jul 21 10:44 @WonderMixTape #KN2 Modified Title: Computational Biology and Human Gene Mapping #ISMBECCB
358960799596810240 Jul 21 10:44 @AlonKeinan Past winners: Bar-Joseph, Troyanskaya, Brenner, Ideker, Regev, E. Segal, Blanchette, E. Birney, U. Alon, J. Kent, Baker, Burge #ISMBECCB
358960889539878912 Jul 21 10:45 @OmicsOmicsBlog RT @satagopam: 1060 alternative exons in the human genome originated from Alu sequence in protein coding genes #ISMBECCB
358960932250066944 Jul 21 10:45 @sjcockell A bioinformatics motivational talk? That would be… weird… #ismbeccb #KN2
358960934846349312 Jul 21 10:45 @arneelof Back in hall 1 for final lecture of the day. Abecasis about sequencing 1000 genome #ismbeccb
358961066539503616 Jul 21 10:46 @thekatybrown1 RT @Chris_Evelo: 2 tweets combined: ICC Berlin. A conference centre designed by MC Escher #ismbeccb You keep on ending in different places using same stairs
358961210328219649 Jul 21 10:46 @WonderMixTape #KN2 Talk quandary: Motivational? humorous (overconfidence)? - ends up going back to beginning (WTC for Human Genetics) #ISMBECCB
358961258457866243 Jul 21 10:46 @larsjuhljensen Sinclair ZX Spectrum - been there done that #ismbeccb #KN2
358961342591422464 Jul 21 10:47 @anilthanki #ISMBECCB keynote talk 2 http://t.co/xq6MAD7mgu
358961450649268225 Jul 21 10:47 @WonderMixTape #KN2 Early work on association mapping in Families - work with Lon Cardon and William Cookson #ISMBECCB
358961490315194368 Jul 21 10:47 @anilthanki RT @larsjuhljensen: Dear @ISMBECCB you run out of coffee in every coffee break. Get it sorted out. Bioinformatician-Coffee=Grumpy #ISMBECCB
358961554034655233 Jul 21 10:47 @rtraborn Goncalo Abecasis now getting going. Ponders different types of talks he could give i.e. humorous, motivational, longitudinal. #ismbeccb #KN2
358961578114560000 Jul 21 10:48 @sciencestream RT @frank_foerster: @gabecasis will talk about insights from sequencing thousands of human genomes #ISMBECCB #KN2
358961579813249024 Jul 21 10:48 @sciencestream RT @WonderMixTape: #KN2 : Intro for GA - author of several of the most downloaded papers in journal #Bioinformatics #ISMBECCB
358961581029617664 Jul 21 10:48 @sciencestream RT @WonderMixTape: #KN2 Modified Title: Computational Biology and Human Gene Mapping #ISMBECCB
358961583252582400 Jul 21 10:48 @sciencestream RT @sjcockell: A bioinformatics motivational talk? That would be… weird… #ismbeccb #KN2
358961584812871680 Jul 21 10:48 @sciencestream RT @arneelof: Back in hall 1 for final lecture of the day. Abecasis about sequencing 1000 genome #ismbeccb
358961616865329154 Jul 21 10:48 @sjcockell Abecasis started out working on association mapping in families http://www.sph.umich.edu/csg/abecasis/publications/pdf/Am.J.Hum.Genet.vol.66-pp.279.pdf #ismbeccb #KN2
358961948181794817 Jul 21 10:49 @froggleston @tehancocks @sjcockell #ismbeccb "Find the tessellating frogs"? Acid in the coffee? It's the only way to traverse the escherscalators.
358962094412021762 Jul 21 10:50 @WonderMixTape #KN2 Key paper: Hirschhorn et al 2002 (Genet Med) - issue of replication in association studies #ISMBECCB
358962375711395841 Jul 21 10:51 @WonderMixTape #KN2 Reviewers to GA: "This data can't be right as it doesn't match the simulations" #ISMBECCB
358962522918879234 Jul 21 10:51 @jonathancairns #ISMBECCB #KN2 Nature reviewers: "We know these data aren't right because they don't match the simulations". *violent facepalm*
358962801379147776 Jul 21 10:52 @arneelof RT @WonderMixTape: #KN2 Reviewers to GA: "This data can't be right as it doesn't match the simulations" #ISMBECCB
358962852406636544 Jul 21 10:53 @WonderMixTape #KN2 Genomic variation in Disequilibrium - clear global patterns emerge #ISMBECCB
358962965128560643 Jul 21 10:53 @rtraborn Nature ed rejects 1 of Abercasis' LED papers "We know this data can't be right b/c it doesn't match the simulations" (wha?) #ismbeccb #KN2
358963011249115137 Jul 21 10:53 @SahaSurya Seriously? RT @WonderMixTape: #KN2 Reviewers to GA: "This data can't be right as it doesn't match the simulations" #ISMBECCB
358963325419261953 Jul 21 10:55 @GigaScience .@gabecasis showing GOLD diagrams he developed. Tried to display LD in an intuitive way. Succeeded in making them colourful #KN2 #ISMBECCB
358963415496146944 Jul 21 10:55 @AlonKeinan file under anecdoates I didn't know: @gabecasis invented LD heatmap plots. #ISMBECCB
358963464531755008 Jul 21 10:55 @WonderMixTape Little known role of GA on HapMap committee - to aggravate DA (Note: he crossed this out but still funny). #ISMBECCB
358963796892987392 Jul 21 10:56 @pjacock RT @sjcockell: ICC Berlin. A conference centre designed by M C Escher #ismbeccb
358963936718094338 Jul 21 10:57 @WonderMixTape Developed Merlin - rather than directly enumerating all possibilities instead used tree structure #ISMBECCB #KN2
358964111054356480 Jul 21 10:58 @SahaSurya Multitask #fail. Distracted by #ISMBECCB and #Ashes. Should pay more attn to #aga2013. Great talks though
358964463984054272 Jul 21 10:59 @Chris_Evelo RT @WonderMixTape: Developed Merlin - rather than directly enumerating all possibilities instead used tree structure #ISMBECCB #KN2
358964834429190144 Jul 21 11:01 @WonderMixTape #KN2 Advantage of joint analysis strategy in #GWAS; Highlighted ability to incorporate family information #ISMBECCB
358964880524976128 Jul 21 11:01 @laxvid RT @jmchilton: Funny, true comments (in summary): No one is going to the library for books so they should be storing our data #ISMBECCB #alsotheyhavecoffee
358965189699309568 Jul 21 11:02 @jonathancairns #ISMBECCB #KN2 Now discussing clever imputation techniques for cheaper genotyping within known families
358965266845532160 Jul 21 11:02 @sciencestream RT @SahaSurya: Multitask #fail. Distracted by #ISMBECCB and #Ashes. Should pay more attn to #aga2013. Great talks though
358965302031155200 Jul 21 11:02 @WonderMixTape #KN2 Rationale for in-silico inference in unrelated individuals #imputation #GWAS #ISMBECCB
358965391491473409 Jul 21 11:03 @rtraborn GA discussing early years of GWAS studies- started solving within family, then moved to imputing over unrelated individuals #ismbeccb #KN2
358965549323141121 Jul 21 11:03 @Chris_Evelo is that you are related, right? RT @WonderMixTape: #KN2 Rationale for in-silico inference in unrelated individuals #imputation #ISMBECCB
358965558424768512 Jul 21 11:03 @WonderMixTape Showed imputation increased power across freq spectrum #KN2 #ISMBECCB #GWAS
358965582214868992 Jul 21 11:03 @larsjuhljensen My presentation "Networks of proteins and diseases" is now on SlideShare http://www.slideshare.net/larsjuhljensen/networks-of-proteins-and-diseases-24470208 #ISMBECCB #SS02
358965688272044032 Jul 21 11:04 @Chris_Evelo RT @larsjuhljensen: My presentation "Networks of proteins and diseases" is now on SlideShare http://www.slideshare.net/larsjuhljensen/networks-of-proteins-and-diseases-24470208 #ISMBECCB #SS02
358965906816249856 Jul 21 11:05 @GigaScience GA on to productive work with the Global Lipids Genetics Consortium. Identified 157 loci associated with lipid levels #KN2 #ISMBECCB
358965936633548800 Jul 21 11:05 @WonderMixTape Global lipids Genetics Consortium - example of current standard for genetic association studies #KN2 #ISMBECCB
358965973908340736 Jul 21 11:05 @RomainStuder RT @larsjuhljensen: My presentation "Networks of proteins and diseases" is now on SlideShare http://www.slideshare.net/larsjuhljensen/networks-of-proteins-and-diseases-24470208 #ISMBECCB #SS02
358966106515451905 Jul 21 11:06 @ongenetics Abecasis #ISMBECCB on imputation: "The only difference between close relatives and distant relatives is the size of the shared haplotypes"
358966179790340096 Jul 21 11:06 @sjcockell RT @ongenetics: Abecasis #ISMBECCB on imputation: "The only difference between close relatives and distant relatives is the size of the shared haplotypes"
358966186584702976 Jul 21 11:06 @rtraborn RT @ongenetics: Abecasis #ISMBECCB on imputation: "The only difference between close relatives and distant relatives is the size of the shared haplotypes"
358966927831474176 Jul 21 11:09 @Alfons_Valencia RT @Chris_Evelo: 2 tweets combined: ICC Berlin. A conference centre designed by MC Escher #ismbeccb You keep on ending in different places using same stairs
358967245373849600 Jul 21 11:10 @jonathancairns #ISMBECCB #KN2 And that concludes a whistlestop tour of the history of the GWAS. Next up - how sequencing has changed the game.
358967248465448960 Jul 21 11:10 @arneelof About half variants are rare #ismbeccb
358967337891803136 Jul 21 11:10 @WonderMixTape Challenge: most coding variation rare (half are private) NS variants esp enriched for singletons (N=2500 NHLBI exome) #ISMBECCB #KN2
358967347711078400 Jul 21 11:10 @sciencestream RT @WonderMixTape: #KN2 Rationale for in-silico inference in unrelated individuals #imputation #GWAS #ISMBECCB
358967382448287744 Jul 21 11:11 @sciencestream RT @WonderMixTape: Showed imputation increased power across freq spectrum #KN2 #ISMBECCB #GWAS
358967509656928256 Jul 21 11:11 @rtraborn GA on how to study knockouts in humans- most people have a defective copy of at least 1 gene- why not study those (w/ permission)? #ismbeccb
358967962054574080 Jul 21 11:13 @ISMBECCB Congrats to 2013 ISCB Overton Prize winner Goncalo Abecasis, his keynote: "Insights from Sequencing Thousands of Human Genomes" #ismbeccb
358967968031444992 Jul 21 11:13 @AlonKeinan After a nice review of LD, imputation, and GWAS, @gabecasis moves on to sequencing. Need to account for genotype likelihoods #ISMBECCB
358968067881041922 Jul 21 11:13 @bffo RT @larsjuhljensen: My presentation "Networks of proteins and diseases" is now on SlideShare http://www.slideshare.net/larsjuhljensen/networks-of-proteins-and-diseases-24470208 #ISMBECCB #SS02
358968147615182848 Jul 21 11:14 @alastair_kerr RT @ongenetics: Abecasis #ISMBECCB on imputation: "The only difference between close relatives and distant relatives is the size of the shared haplotypes"
358968474850562048 Jul 21 11:15 @JMGIzarzugaza RT @larsjuhljensen: Dear @ISMBECCB you run out of coffee in every coffee break. Get it sorted out. Bioinformatician-Coffee=Grumpy #ISMBECCB
358968484362850304 Jul 21 11:15 @luispedrocoelho "there have been over 150 clinical tests of therapies against inflammation in trauma, they all failed" #ISMBECCB
358968545469661184 Jul 21 11:15 @WonderMixTape #KN2 @gabecasis 1000 Genomes Project - using haplotype info improved genotype accuracy #ISMBECCB
358968785144782848 Jul 21 11:16 @WonderMixTape "Friendly competition" between Broad, Michigan and Sanger - each did best by some metric re seq quality / analysis #ISMBECCB #KN2
358968787304845312 Jul 21 11:16 @BGI_Events .@gabecasis now onto @1000genomes project we were also involved in http://www.1000genomes.org/ #KN2 #ISMBECCB
358968928757743617 Jul 21 11:17 @ypriverol RT @larsjuhljensen: My presentation "Networks of proteins and diseases" is now on SlideShare http://www.slideshare.net/larsjuhljensen/networks-of-proteins-and-diseases-24470208 #ISMBECCB #SS02
358968936618266624 Jul 21 11:17 @DNADigest RT @froggleston: @tehancocks @sjcockell #ismbeccb "Find the tessellating frogs"? Acid in the coffee? It's the only way to traverse the escherscalators.
358968950509809664 Jul 21 11:17 @DNADigest RT @sjcockell: ICC Berlin. A conference centre designed by M C Escher #ismbeccb
358969018633297920 Jul 21 11:17 @jjspr Again: ensembl of methods outperform the single best method. #ismbeccb #sbvimprover
358969036987580416 Jul 21 11:17 @AlonKeinan GA: imputation-based genotype calling improves accuracy greatly, which is part of the rationale behind @1000genomes design #ISMBECCB
358969055799033857 Jul 21 11:17 @WonderMixTape "ensemble" method approach requested by funder outperforms best single method #KN2 #ISMBECCB
358969178675351554 Jul 21 11:18 @yaydinson RT @jjspr: Again: ensembl of methods outperform the single best method. #ismbeccb #sbvimprover
358969234736807936 Jul 21 11:18 @frank_foerster RT @larsjuhljensen: My presentation "Networks of proteins and diseases" is now on SlideShare http://www.slideshare.net/larsjuhljensen/networks-of-proteins-and-diseases-24470208 #ISMBECCB #SS02
358969329368305664 Jul 21 11:18 @WonderMixTape Use Case: Whole Genome Sequencing study in Sardinia - deep genomes or shallow? (Li et al Genome Research 2011) #KN2 #ISMBECCB
358969336158883840 Jul 21 11:18 @SCEdmunds Wow, there has to be >1000 genomes just in the participants list http://www.1000genomes.org/participants #KN1 #ISMBECCB
358969390928515072 Jul 21 11:19 @DNADigest RT @sjcockell: Abecasis started out working on association mapping in families http://www.sph.umich.edu/csg/abecasis/publications/pdf/Am.J.Hum.Genet.vol.66-pp.279.pdf #ismbeccb #KN2
358969637121585152 Jul 21 11:20 @DNADigest RT @WonderMixTape: Showed imputation increased power across freq spectrum #KN2 #ISMBECCB #GWAS
358969674786414592 Jul 21 11:20 @arneelof RT @WonderMixTape: "ensemble" method approach requested by funder outperforms best single method #KN2 #ISMBECCB
358969763281645570 Jul 21 11:20 @WonderMixTape #KN2 #ISMBECCB Got 2000 genomes at 4x for price they had originally been quoted for 1000 genomes
358970045759623172 Jul 21 11:21 @rtraborn GA is now discussing his role in the @1000genomes project, and the development of competing methods. Ensemble method was used #ismbeccb
358970058749378560 Jul 21 11:21 @yaydinson RT @WonderMixTape: #KN2 #ISMBECCB Got 2000 genomes at 4x for price they had originally been quoted for 1000 genomes
358970060963975168 Jul 21 11:21 @Chris_Evelo #KN2 error rate gets lower if you have more individuals to work from. Argument to sequence everyone? #ISMBECCB
358970274223374338 Jul 21 11:22 @AlonKeinan GA: Based on @1000genomes, for a whole genome study in Sardinia, decided to sequence more individual (4000) at low coverage (4x) #ISMBECCB
358970336357777409 Jul 21 11:22 @WonderMixTape #KN2 Impressive list of methodological contributions 2000 to 2012 #ISMBECCB #ÜberProductive
358970538200285184 Jul 21 11:23 @WonderMixTape "Most valuable tools address important questions" #ResearchBottlenecks #FocusedMethods #KN2 #ISMBECCB
358970577962278912 Jul 21 11:23 @danmaclean RT @WonderMixTape: "Most valuable tools address important questions" #ResearchBottlenecks #FocusedMethods #KN2 #ISMBECCB
358970581787484161 Jul 21 11:23 @sjcockell GA - 4/10 most cited software tools are “technically trivial” #ismbeccb #KN2
358970669364543489 Jul 21 11:24 @jonathancairns #ISMBECCB #KN2 Abercasis: Which of my algorithms were most influential? Not cleverest or most technical... the ones that answered useful qns
358970768228495360 Jul 21 11:24 @luispedrocoelho "By studying natural mutations in large populations, we could have gene knockouts in humans instead of mice" Abecasis #ISMBECCB
358970792542875648 Jul 21 11:24 @Chris_Evelo GA some of our tools are not overly smart, they just answer useful questions. Now that *is* smart. #ismbeccb #kn2
358970838831202306 Jul 21 11:24 @rtraborn GA shows rapid decrease in sequencing costs & this gambit: the longer one waits to use sequencing $$, the more data one obtains #ismbeccb
358970857843998721 Jul 21 11:24 @sjcockell Instead of being technically complicated, the most pilar tools focussed on answering useful questions #ismbeccb #KN2
358970961757880320 Jul 21 11:25 @rtraborn RT @jonathancairns: #ISMBECCB #KN2 Abercasis: Which of my algorithms were most influential? Not cleverest or most technical... the ones that answered useful qns
358971035669889024 Jul 21 11:25 @JMGIzarzugaza #ISMBECCB Goncalo Abecasis on the importance of addressing interesting questions rather than providing (algorithmically) complex solutions
358971074391719940 Jul 21 11:25 @WonderMixTape Studies across time 2000:N=100's; 26 markers; 2010: N=100,000; 2.5 million markers; 2012: N= 1092 40 million markers #ISMBECCB #KN2
358971078997049344 Jul 21 11:25 @larsjuhljensen RT @sjcockell: Instead of being technically complicated, the most pilar tools focussed on answering useful questions #ismbeccb #KN2
358971092485947392 Jul 21 11:25 @AlonKeinan GA: During 13-year career in the field, million-fold increase in number of markers and thousand-fold in number of samples #ISMBECCB
358971100413165568 Jul 21 11:25 @jonathancairns #ISMBECCB #KN2 "Data is not Understanding". YES. Very much this. "Enable scientists to pose interesting questions"
358971159431217152 Jul 21 11:26 @sjcockell Data is not understanding. Tools are not analysis. Wise words #ismbeccb #KN2
358971170018066432 Jul 21 11:26 @abeldavidgp RT @RomainStuder: Domain Mappings of Disease Mutations: http://bioinf.umbc.edu/dmdm from Kann's lab #ISMBECCB
358971200447324160 Jul 21 11:26 @WonderMixTape RT @sjcockell: Data is not understanding. Tools are not analysis. Wise words #ismbeccb #KN2
358971300909301760 Jul 21 11:26 @GigaScience GA on sample sizes needed to get into Nature from 2000-2012: n increased from 42 to 40M (@1000genomes) markers #KN2 #ISMBECCB
358971350645358595 Jul 21 11:26 @bffo GA: "Data is not understanding, unfortunately" & "Tools is not analysis, unfortunately" #ISMBECCB
358971390134730756 Jul 21 11:27 @rtraborn Abercasis: data is not knowledge, and tools are not analysis. Need to answer good Qs, and help direct scientists toward this end #ismbeccb
358971419712946177 Jul 21 11:27 @jaumebp RT @sjcockell: Data is not understanding. Tools are not analysis. Wise words #ismbeccb #KN2
358971531722248192 Jul 21 11:27 @luispedrocoelho RT @sjcockell: Data is not understanding. Tools are not analysis. Wise words #ismbeccb #KN2
358971637619621889 Jul 21 11:28 @WonderMixTape Richard Durbin and GA: Estimate # of genomes they will have access to by end of year: N=25000 #ISMBECCB #KN2
358971645416841216 Jul 21 11:28 @i_am_kilpatrick Higher resistance to malaria in Sardinians -> lower cholesterol. Does this mean benefits of 'Med. diet' have been overstated? #ISMBECCB #KN2
358971709258350592 Jul 21 11:28 @marinkazitnik Data is not understanding. Tools are not analysis. Unfortunately. G. A. keynote at #ISMBECCB
358971861968752640 Jul 21 11:28 @WonderMixTape #OpenProblem De-Novo Assemblies #ISMBECCB #KN2 issue of biases from read mapping approaches #KN2 #ISMBECCB
358972038880301056 Jul 21 11:29 @WonderMixTape Idea of Lattice of sequenced genomes - proximity studies in genomic terms #ISMBECCB #KN2
358972176781021184 Jul 21 11:30 @arneelof RT @WonderMixTape: "Most valuable tools address important questions" #ResearchBottlenecks #FocusedMethods #KN2 #ISMBECCB
358972245508501507 Jul 21 11:30 @WonderMixTape @gabecasis Fantastic Keynote! Congrats on Overton Prize. Well deserved #ISMBECCB #KN2
358972279684096000 Jul 21 11:30 @arneelof RT @bffo: GA: "Data is not understanding, unfortunately" & "Tools is not analysis, unfortunately" #ISMBECCB
358972316048711680 Jul 21 11:30 @arneelof RT @WonderMixTape: Richard Durbin and GA: Estimate # of genomes they will have access to by end of year: N=25000 #ISMBECCB #KN2
358972413985697792 Jul 21 11:31 @DNADigest RT @sjcockell: Instead of being technically complicated, the most pilar tools focussed on answering useful questions #ismbeccb #KN2
358972451679510528 Jul 21 11:31 @drbachinsky RT @ongenetics: Abecasis #ISMBECCB on imputation: "The only difference between close relatives and distant relatives is the size of the shared haplotypes"
358972504557514752 Jul 21 11:31 @DNADigest RT @bffo: GA: "Data is not understanding, unfortunately" & "Tools is not analysis, unfortunately" #ISMBECCB
358972555798921216 Jul 21 11:31 @froggleston Is that whale song I hear? No. Squeaky flappy chairs. #ismbeccb
358972569325539329 Jul 21 11:31 @RomainStuder Painful all the noisy people going out during the question session ! :( #ISMBECCB
358972660274823169 Jul 21 11:32 @WonderMixTape RT @RomainStuder: Painful all the noisy people going out during the question session ! :( #ISMBECCB
358972677047853059 Jul 21 11:32 @WonderMixTape RT @froggleston: Is that whale song I hear? No. Squeaky flappy chairs. #ismbeccb
358972692382638080 Jul 21 11:32 @abeldavidgp RT @jaumebp: @bffo @jmchilton "Well, a script is what you give the actors, but a program is what you give the audience" Larry Wall #ISMBECCB
358972767028260864 Jul 21 11:32 @paul_r_fisher Didn't knows the clangers had made the keynote hall their home at #ismbeccb. Odd noises
358972874297970688 Jul 21 11:32 @paul_r_fisher RT @sjcockell: ICC Berlin. A conference centre designed by M C Escher #ismbeccb
358972914743255040 Jul 21 11:33 @BGI_Events GA highlighting importance of de novo assembly of human genomes. Our work on this in @naturebiotech http://ow.ly/naB2V #KN2 #ISMBECCB
358973127847452672 Jul 21 11:33 @frank_foerster @gabecasis has positions available. #ISMBECCB #KN2
358973134017294337 Jul 21 11:33 @laxvid Space station ICC Berlin #ISMBECCB I am expecting Spock to appear any time. http://t.co/srSa1EBf9C
358973303941529600 Jul 21 11:34 @sciencestream RT @WonderMixTape: Idea of Lattice of sequenced genomes - proximity studies in genomic terms #ISMBECCB #KN2
358973305216589824 Jul 21 11:34 @sciencestream RT @WonderMixTape: @gabecasis Fantastic Keynote! Congrats on Overton Prize. Well deserved #ISMBECCB #KN2
358973306248376320 Jul 21 11:34 @sciencestream RT @froggleston: Is that whale song I hear? No. Squeaky flappy chairs. #ismbeccb
358973330063241216 Jul 21 11:34 @AlonKeinan RT @jonathancairns: #ISMBECCB #KN2 Abercasis: Which of my algorithms were most influential? Not cleverest or most technical... the ones that answered useful qns
358973339701747712 Jul 21 11:34 @RomainStuder RT @frank_foerster: @gabecasis has positions available. #ISMBECCB #KN2
358973383326695425 Jul 21 11:34 @SahaSurya MT @Chris_Evelo: Abercasis: Some of our tools are not overly smart, they just answer useful questions. Now that *is* smart. #ismbeccb #kn2
358973459550175232 Jul 21 11:35 @DNADigest RT @WonderMixTape: @gabecasis Fantastic Keynote! Congrats on Overton Prize. Well deserved #ISMBECCB #KN2
358973642702471168 Jul 21 11:36 @Chris_Evelo If you can't get more samples getting more controls (and enabling reuse of controls across studies) might help #ismbeccb #kn2
358973648389931009 Jul 21 11:36 @WonderMixTape "We need to be humble about what we can predict" - @gabecasis #KN2 #ISMBECCB
358973833010618368 Jul 21 11:36 @RomainStuder RT @Chris_Evelo: If you can't get more samples getting more controls (and enabling reuse of controls across studies) might help #ismbeccb #kn2
358973950639882241 Jul 21 11:37 @SahaSurya MT @AlonKeinan: Abercacis: During 13-yr career, million-fold increase in number of markers and thousand-fold in number of samples #ISMBECCB
358973990981095424 Jul 21 11:37 @foreveremain RT @iddux: RT @RomainStuder: "Today I got my first poster award !!! \o/ Thanks ! #AFP13 #ISMBECCB" <-- Well deserved!!!
358974102196846593 Jul 21 11:37 @rtraborn GA: People should be able to have information about themselves. It's paternalistic to say what they should or shouldn't see #ismbeccb #KN2
358974118558830593 Jul 21 11:37 @SahaSurya RT @bffo: GA: "Data is not understanding, unfortunately" & "Tools is not analysis, unfortunately" #ISMBECCB
358974218244861952 Jul 21 11:38 @jonathancairns We're into the age-old ethics+genetics question. If we could tell you that you are at high risk of cancer, would you want to know? #ISMBECCB
358974477415104512 Jul 21 11:39 @WonderMixTape Caution: People are very good at finding patterns #ISMBECCB #KN2
358974700094889984 Jul 21 11:40 @AlonKeinan In sum, great talk by @gabecasis. Very clear and modest about what done and realistic about what will become possible in future #ISMBECCB
358974731338645504 Jul 21 11:40 @jamesblonde85 RT @tgjraymond: My poster on detecting polyA tails in denovo assemblies. #ismbeccb #g15 http://t.co/D4pBtMJaEp
358975101187796993 Jul 21 11:41 @BUbioinfo What is your "ah ha" moment for today? We want you to share them with us. #ISMBECCB
358975986081488896 Jul 21 11:45 @jjmerkin RT @iddux: OMIM has been around since 1966! No genes in OMIM's early editions, since that was Before Cloning (BC era). #ISMBECCB
358976316903010304 Jul 21 11:46 @sciencestream RT @Chris_Evelo: If you can't get more samples getting more controls (and enabling reuse of controls across studies) might help #ismbeccb #kn2
358976317905444864 Jul 21 11:46 @sciencestream RT @WonderMixTape: "We need to be humble about what we can predict" - @gabecasis #KN2 #ISMBECCB
358976684659585024 Jul 21 11:48 @DrViborilla RT @larsjuhljensen: My presentation "Networks of proteins and diseases" is now on SlideShare http://www.slideshare.net/larsjuhljensen/networks-of-proteins-and-diseases-24470208 #ISMBECCB #SS02
358977594580287488 Jul 21 11:51 @DNADigest RT @Chris_Evelo: If you can't get more samples getting more controls (and enabling reuse of controls across studies) might help #ismbeccb #kn2
358977610149556225 Jul 21 11:51 @Hoellenmotte RT @sjcockell: Data is not understanding. Tools are not analysis. Wise words #ismbeccb #KN2
358978216356483072 Jul 21 11:54 @biyoinformatik RT @WonderMixTape: #KN2 #ISMBECCB Got 2000 genomes at 4x for price they had originally been quoted for 1000 genomes
358978491439521793 Jul 21 11:55 @SuzanaEzquina @ISMBECCB Following at distance this time. #ismbeccb.
358979457224548352 Jul 21 11:59 @sciencestream RT @SuzanaEzquina: @ISMBECCB Following at distance this time. #ismbeccb.
358980032284622848 Jul 21 12:01 @AmyeKenall RT @sjcockell: ICC Berlin. A conference centre designed by M C Escher #ismbeccb
358980162638970882 Jul 21 12:01 @wjrl59 RT @Chris_Evelo: 2 tweets combined: ICC Berlin. A conference centre designed by MC Escher #ismbeccb You keep on ending in different places using same stairs
358980182977167360 Jul 21 12:01 @jose_pedro_dias RT @sjcockell: Data is not understanding. Tools are not analysis. Wise words #ismbeccb #KN2
358980555330682881 Jul 21 12:03 @manuelcorpas MT @froggleston: Accurate description of scripts, tools and pipelines completely essential for reproducible research. #wk02 #ismbeccb
358980804728610817 Jul 21 12:04 @VickySchneiderG RT @bffo: GA: "Data is not understanding, unfortunately" & "Tools is not analysis, unfortunately" #ISMBECCB
358981209273016320 Jul 21 12:06 @amcrisan RT @bffo: GA: "Data is not understanding, unfortunately" & "Tools is not analysis, unfortunately" #ISMBECCB
358984025337114626 Jul 21 12:17 @Alfons_Valencia Iscb conference committee. Discussing how to collaborate with conferences in Asia. #ismbeccb.
358986086661750784 Jul 21 12:25 @sciencestream RT @Alfons_Valencia: Iscb conference committee. Discussing how to collaborate with conferences in Asia. #ismbeccb.
358988561661435904 Jul 21 12:35 @widdowquinn RT @jonathancairns: #ISMBECCB #KN2 Abercasis: Which of my algorithms were most influential? Not cleverest or most technical... the ones that answered useful qns
358990579415674880 Jul 21 12:43 @ctitusbrown RT @bffo: GA: "Data is not understanding, unfortunately" & "Tools is not analysis, unfortunately" #ISMBECCB
358995147494658048 Jul 21 13:01 @DNADigest Heading back to the UK. Thank you for a great #BOSC2013 #ISMBECCB See you again at the DNAdigest hack day? http://DNAdigest-hackday.eventbrite.com
358995543067860993 Jul 21 13:03 @McDawg RT @DNADigest: Heading back to the UK. Thank you for a great #BOSC2013 #ISMBECCB See you again at the DNAdigest hack day? http://t.co/8a9LVJmfqV
358995717970731008 Jul 21 13:03 @sciencestream RT @DNADigest: Heading back to the UK. Thank you for a great #BOSC2013 #ISMBECCB See you again at the DNAdigest hack day? http://t.co/8a9LVJmfqV
358998042286260224 Jul 21 13:12 @Janis3_14159 RT @larsjuhljensen: My presentation "Networks of proteins and diseases" is now on SlideShare http://www.slideshare.net/larsjuhljensen/networks-of-proteins-and-diseases-24470208 #ISMBECCB #SS02
359004009715073025 Jul 21 13:36 @evolvability RT @SahaSurya: Seriously? RT @WonderMixTape: #KN2 Reviewers to GA: "This data can't be right as it doesn't match the simulations" #ISMBECCB
359013219844628480 Jul 21 14:13 @pedrobeltrao One number from today's keynote @gabecasis - 25000 full genome sequences up to the end of the year that he is aware of #ISMBECCB
359022547406303232 Jul 21 14:50 @coughls Many interesting talks and posters and a great keynote to finish the day. #ISMBECCB #KN2
359022630965633024 Jul 21 14:50 @sciencestream RT @coughls: Many interesting talks and posters and a great keynote to finish the day. #ISMBECCB #KN2
359024127757127680 Jul 21 14:56 @coughls Loving free @PLOSCompBiol t-shirt!Thanks! #ISMBECCB
359024531408953344 Jul 21 14:58 @sciencestream RT @coughls: Loving free @PLOSCompBiol t-shirt!Thanks! #ISMBECCB
359027078504906752 Jul 21 15:08 @jmarlesw RT @sjcockell: Data is not understanding. Tools are not analysis. Wise words #ismbeccb #KN2
359034314882678785 Jul 21 15:37 @ryans77388_ #KN2 Advantage of joint analysis strategy in #GWAS; Highlighted ability to incorporate family information #ISMBECCB
359035708662902784 Jul 21 15:42 @sciencestream RT @ryans77388_: #KN2 Advantage of joint analysis strategy in #GWAS; Highlighted ability to incorporate family information #ISMBECCB
359040606985003008 Jul 21 16:02 @JayneHehirKwa RT @ongenetics: Abecasis #ISMBECCB on imputation: "The only difference between close relatives and distant relatives is the size of the shared haplotypes"
359047434204225537 Jul 21 16:29 @kaittenage RT @sjcockell: Data is not understanding. Tools are not analysis. Wise words #ismbeccb #KN2
359049685694038016 Jul 21 16:38 @danielgjamieson Enjoying #ISMBECCB so far, after initial disappointment of not finding free t shirts #PLOSONE and #iscb have rescued this year's gym attire
359050513046052864 Jul 21 16:41 @sciencestream RT @danielgjamieson: Enjoying #ISMBECCB so far, after initial disappointment of not finding free t shirts #PLOSONE and #iscb have rescued this year's gym attire
359054582640427008 Jul 21 16:57 @cazencott Great workshop on #heritability this morning at #ISMBECCB. Nice insights from D. Balding on there being as many measures of h as models.
359054879030902784 Jul 21 16:58 @cazencott Looking forward to the details of Eric Xing's work on epistasis detection (to be published soon I hope) #heritability #ISMBECCB
359055490472763392 Jul 21 17:01 @sciencestream RT @cazencott: Great workshop on #heritability this morning at #ISMBECCB. Nice insights from D. Balding on there being as many measures of h as models.
359058582035111937 Jul 21 17:13 @andrewsu RT @larsjuhljensen: My presentation "Networks of proteins and diseases" is now on SlideShare http://www.slideshare.net/larsjuhljensen/networks-of-proteins-and-diseases-24470208 #ISMBECCB #SS02
359060556117848065 Jul 21 17:21 @TrishWhetzel RT @tmccormick: @kaythaney “’You don’t eval software by impact factor’ @CameronNeylon #ismbeccb #BOSC2013”: you see if it works, can’t usu do that w/paper.
359060629006467072 Jul 21 17:21 @TrishWhetzel RT @bffo: .@CameronNeylon has great slides in his keynotes/talks http://cameronneylon.net/presentations/ #ismbeccb #BOSC2013
359071677894131712 Jul 21 18:05 @torstenseemann Finally met @sjackman and @BioMickWatson in person at #ismbeccb and was not disappointed, even before the four pints.
359071783409819649 Jul 21 18:05 @sciencestream RT @torstenseemann: Finally met @sjackman and @BioMickWatson in person at #ismbeccb and was not disappointed, even before the four pints.
359072999296602112 Jul 21 18:10 @BioMickWatson RT @torstenseemann Finally met @sjackman and @BioMickWatson in person at #ismbeccb and was not disappointed, even before the four pints
359088038128787459 Jul 21 19:10 @EvoMRI RT @PLOSCompBiol: The PLOS booth (13) is set up @ #ISMBECCB! Drop by to pick up your free t-shirt from tomorrow: http://blogs.plos.org/biologue/2013/06/20/plos-computational-biology-announces-t-shirt-design-winner/ http://t.co/0df14XMamj
359088462940475394 Jul 21 19:12 @EvoMRI RT @bffo: classic picture! RT @larsjuhljensen: Open Access: Do Not Enter #OpenAccess #ISMBECCB http://t.co/2INHVSKkM7
359088676589940736 Jul 21 19:13 @APGI_Oz RT @bffo: GA: "Data is not understanding, unfortunately" & "Tools is not analysis, unfortunately" #ISMBECCB
359127943387152384 Jul 21 21:49 @hongqin RT @Hoellenmotte: #ismbeccb Peter Glaus on Alternative Transcript abundance estimation using Bayesian Modeling in Hall 14.2 http://t.co/IiTLLXxB3D
359167554058596353 Jul 22 00:26 @EvoMRI Off to the @PLOSCompBiol editorial breakfast at #ISMBECCB .
359168401572634624 Jul 22 00:29 @sciencestream RT @EvoMRI: Off to the @PLOSCompBiol editorial breakfast at #ISMBECCB .
359185527620108288 Jul 22 01:37 @michautbioinfo Discussion about (un)conferences and (un)seminars today 17:40 in Hall 10 #ismb2013unconf #ismbeccb BoF 06
359187118410964992 Jul 22 01:44 @sciencestream RT @michautbioinfo: Discussion about (un)conferences and (un)seminars today 17:40 in Hall 10 #ismb2013unconf #ismbeccb BoF 06
359189702848819200 Jul 22 01:54 @arneelof RT @EvoMRI: Off to the @PLOSCompBiol editorial breakfast at #ISMBECCB .
359190127253274624 Jul 22 01:56 @jamesmalone I'll be presenting on #rdf & data integration work we're doing with gene expression atlas & NCBO at #ismbeccb #TT21 at 12 #emblebi
359191251590971392 Jul 22 02:00 @cathbrooksbank RT @jamesmalone: I'll be presenting on #rdf & data integration work we're doing with gene expression atlas & NCBO at #ismbeccb #TT21 at 12 #emblebi
359192094021140480 Jul 22 02:04 @cathbrooksbank Come and see #ISMBECCB's first ever education poster session today and tomorrow - posters D01-D20 (odd today; even tomorrow).
359192847703998466 Jul 22 02:07 @cathbrooksbank @slmorg will present her poster at #ISMBECCB this lunchtime: poster D09 'Training in tools and resources: the EMBL-EBI experience #emblebi
359193146565337088 Jul 22 02:08 @sciencestream RT @jamesmalone: I'll be presenting on #rdf & data integration work we're doing with gene expression atlas & NCBO at #ismbeccb #TT21 at 12 #emblebi
359193158951133184 Jul 22 02:08 @sciencestream RT @cathbrooksbank: Come and see #ISMBECCB's first ever education poster session today and tomorrow - posters D01-D20 (odd today; even tomorrow).
359193166987423744 Jul 22 02:08 @sciencestream RT @cathbrooksbank: @slmorg will present her poster at #ISMBECCB this lunchtime: poster D09 'Training in tools and resources: the EMBL-EBI experience #emblebi
359194452096598016 Jul 22 02:13 @cathbrooksbank Join Lonnie Welch and other #ISCB education committee folks at bioinformatics curriculum BOF session today - rooms 4-5, 13:00. #ISMBECCB
359198723466739712 Jul 22 02:30 @GenomeBiology #ISMBECCB Lior Pachter one if our editorial board giving this morning's keynote. Good start to the day.
359200103812579328 Jul 22 02:35 @sciencestream RT @GenomeBiology: #ISMBECCB Lior Pachter one if our editorial board giving this morning's keynote. Good start to the day.
359203542273630208 Jul 22 02:49 @tehancocks RT @cathbrooksbank: @slmorg will present her poster at #ISMBECCB this lunchtime: poster D09 'Training in tools and resources: the EMBL-EBI experience #emblebi
359204664161873920 Jul 22 02:54 @tehancocks RT @jamesmalone: I'll be presenting on #rdf & data integration work we're doing with gene expression atlas & NCBO at #ismbeccb #TT21 at 12 #emblebi
359204664597692416 Jul 22 02:54 @iysik_com We should go to #ECCB14 for the food and Rhein champagne! 7th - 10th sept. 2014. #ISMBECCB
359204989056454656 Jul 22 02:55 @Alfons_Valencia Anna Tramontano announcing ECCB 7-10 sep 2014 Strasbourg France. Very nice place (and food) for a surely good conference #ISMBECCB
359205330468622336 Jul 22 02:56 @bffo .@jfkelso announcing #ISMB2014 in Boston next year! #ISMBECCB http://t.co/GFjxMt3HOc
359205493082193920 Jul 22 02:57 @yannabraham RT @bffo: .@jfkelso announcing #ISMB2014 in Boston next year! #ISMBECCB http://t.co/GFjxMt3HOc
359205566129778691 Jul 22 02:57 @Alfons_Valencia Janet Kelso announcing ISMB July 11-15 2014 Boston. ISMB has been there before and it worked very well. #ISMBECCB
359205755968167936 Jul 22 02:58 @arneelof #gendercount at @PLOSCompBiol editorial meeting #ismbeccb women: staff 3/3 editors 3/16 editor in chief 1/1
359205925795536897 Jul 22 02:59 @bffo RT @arneelof: #gendercount at @PLOSCompBiol editorial meeting #ismbeccb women: staff 3/3 editors 3/16 editor in chief 1/1
359252451280424960 Jul 22 06:03 @rohitfarmer Wrong ppt loaded in hall 7 :-) speaker in surprise and audience confused #ISMBECCB @ISMBECCB
359252552904228865 Jul 22 06:04 @cathbrooksbank @pebourne we don't have digital campfires yet #ISMBECCB
359252681136680960 Jul 22 06:04 @karinv Barend Mons "Why would I believe this triple?" narrative for data interpretation #beyondthepdf #nanopubs #ismbeccb
359252793778900993 Jul 22 06:05 @lenovere #ismbeccb The specification of the SBGN Entity Relationship language mentioned by Marcus Krantz can be found at http://precedings.nature.com/documents/5902/version/1
359253032548458496 Jul 22 06:06 @iddux RT @karinv: Barend Mons "Why would I believe this triple?" narrative for data interpretation #beyondthepdf #nanopubs #ismbeccb
359253171027607552 Jul 22 06:06 @sciencestream RT @didimo16: @dagmarwaltemath I think it's the same for me... Sometimes you need luck at #ismbeccb
359253179705593856 Jul 22 06:06 @sciencestream RT @iddux: RT @bffo: From @SCEdmunds: the video to "Hitler tries to publish a scientific paper" http://www.youtube.com/watch?v=zF40XzwGA64 #WK3 #ISMBECCB @GigaScience
359253182733893632 Jul 22 06:06 @sciencestream RT @LabCritics: No mention about @scienceexchange 's reproducability initiative at #ISMBECCB #reproducabilityinititive
359253196851908608 Jul 22 06:06 @markwassy RT @ISMBECCB: Woohoo! RT @rtraborn Be proud, ISMB delegates- as of this moment #ISMBECCB is out-trending #RoyalBaby http://t.co/QTKO95DjkG
359253197845954560 Jul 22 06:06 @sciencestream RT @AmyeKenall: Also have a few irresistible GigaPanda USB sticks for ppl especially interested in @GigaScience #ISMBECCB #WK3 http://t.co/nzzNr7srGv
359253203789303808 Jul 22 06:06 @sciencestream RT @paul_r_fisher: #keynote #kn2 #ismbeccb #overtonprize - insights from sequencing thousands of genomes
359253327235661824 Jul 22 06:07 @cathbrooksbank @ProfLHunter wants to do new science with open data; it's not just about reproducibility of existing work. Buy this man a beer #ISMBECCB
359253433259274241 Jul 22 06:07 @arneelof No check this @cathbrooksbank: @ProfLHunter story important but there are ways of making narrative more #ISMBECCB" https://www.google.se/url?sa=t&source=web&cd=2&cad=rja&ved=0CCkQFjAB&url=http%3A%2F%2Fbass.bio.uci.edu%2F~hudel%2Fm160%2Fheijne_play_memb_prot.pdf&ei=7APtUY3mBo_FswbXrIDQBA&usg=AFQjCNH3XItKUc2s9XKSNi0jwlaKq9xCkA&sig2=3nIAAoKKfgY8BILqgqbEmg&bvm=bv.49478099,d.Yms
359253642626334720 Jul 22 06:08 @lenovere #ismbeccb And now Marcus Krantz uses SBGN Activity Flows http://precedings.nature.com/documents/3724/version/1
359253653233737729 Jul 22 06:08 @dagmarwaltemath NCBO and EBI now have SPARQL endpoints to some data. James Malone #ismbeccb
359253675291586560 Jul 22 06:08 @WonderMixTape Define subtypes using mutations which predict phenotype as part of clinical translation pipeline #LBR12 #ISMBECCB
359253763371966465 Jul 22 06:09 @larsjuhljensen Long chimeric RNAs may be formed through trans-splicing of genes #ISMBECCB #PP37
359253935254544385 Jul 22 06:09 @arneelof Chimeric RNA found in many organisms. Few chimeric proteins. Why? #ismbeccb
359254155400986625 Jul 22 06:10 @jonathancairns #ISMBECCB #PP37 We see lots of chimeric RNA - why dont we see many chimeric proteins?
359254388658806785 Jul 22 06:11 @larsjuhljensen High discrepancy between number of chimeric RNAs and chimeric proteins #ISMBECCB #PP37
359254587317813249 Jul 22 06:12 @larsjuhljensen RT @karinv: Barend Mons "Why would I believe this triple?" narrative for data interpretation #beyondthepdf #nanopubs #ismbeccb
359254589238820864 Jul 22 06:12 @arneelof Reasons not functional, functional at rna level or? Studied by RNA-seq #ismbeccb
359254592263299072 Jul 22 06:12 @sciencestream RT @arneelof: No check this @cathbrooksbank: @ProfLHunter story important but there are ways of making narrative more #ISMBECCB" https://t.co/WB4jKE3g1t
359254978516361217 Jul 22 06:13 @bffo MT @biosharing: @GigaScience: sorry 4 not being there! Between U & RL @F1000Research, @isatools & @biosharing r well represented #ISMBECCB
359255050176049152 Jul 22 06:14 @arneelof Rpkm is reads per kb per million reads #ismbeccb
359255259287261185 Jul 22 06:15 @iddux Now talking about attribution & "nanopublications". #ismbeccb #wk03
359255393467252737 Jul 22 06:15 @iysik_com Come by poster F31 in central lobby! #ISMBECCB
359255745277079552 Jul 22 06:16 @larsjuhljensen Chimeric transcripts are low expressed #ISMBECCB #PP37
359255916824100864 Jul 22 06:17 @rohitfarmer There are more chimeric RNAs than chimeric proteins, why? Hall 7 #ISMBECCB @ISMBECCB
359256155475812352 Jul 22 06:18 @rtraborn Chimeric RNAs are lowly-expressed, but parental genes are highly expressed. Tissue-specific expression suggests regulation. #ismbeccb #PP37
359256368592609280 Jul 22 06:19 @RomainStuder I will present my poster (stability, protein, enzyme, prediction) at this session (Room 15.2, number L075). #ISMBECCB http://t.co/84UMx8HmNG
359256521340747778 Jul 22 06:20 @iddux MolBiol data more biased and less informative than you think. Poster L087 today #ISMBECCB http://www.iscb.org/cms_addon/conferences/ismbeccb2013/posterlist.php?cat=L
359256560242921472 Jul 22 06:20 @jonathancairns Oh no it's a chimeric presentation! #PP37 #ISMBECCB
359256671945625600 Jul 22 06:20 @iddux MolBiol data more biased and less informative than you think. Poster L087 today #ISMBECCB http://www.iscb.org/cms_addon/conferences/ismbeccb2013/posterlist.php?cat=L Room 14.2
359256679583862784 Jul 22 06:20 @arneelof I guess that chimeric rna is the same as for alternative splicing. Only 12 out of 177 chimeric rna verified att protein level #ismbeccb
359256709774061570 Jul 22 06:20 @larsjuhljensen Mass-spectrometry-based validation of chimeric proteins predicted from chimeric transcripts #ISMBECCB #PP37
359256783862247424 Jul 22 06:21 @rtraborn Very a propos, especially if you're in Hall 7. // “@jonathancairns: Oh no it's a chimeric presentation! #PP37 #ISMBECCB”
359256879622389760 Jul 22 06:21 @CLCbio Remember to stop by our booth in the lunch break today - free BLAST t-shirts: http://t.co/Nr8kbKa6hv #ismbeccb
359256952645623808 Jul 22 06:21 @chunleiwu RT @danmaclean: Big thing for the future - nanopubs. Not a hostelry, but publish little and often #ISMBECCB
359257163820453888 Jul 22 06:22 @foreveremain RT @rtraborn: Very a propos, especially if you're in Hall 7. // “@jonathancairns: Oh no it's a chimeric presentation! #PP37 #ISMBECCB”
359257316509483008 Jul 22 06:23 @jonathancairns Chimeric proteins (bits of two separate proteins bolted together, often altering function) verified with mass spectrometry #PP37 #ISMBECCB
359257420570173440 Jul 22 06:23 @RomainStuder RT @iddux: MolBiol data more biased and less informative than you think. Poster L087 today #ISMBECCB http://www.iscb.org/cms_addon/conferences/ismbeccb2013/posterlist.php?cat=L Room 14.2
359258136202723328 Jul 22 06:26 @arneelof Lunch any recommendations? #ismbeccb
359258265172975616 Jul 22 06:26 @rtraborn Chimeric proteins verified by Mass Spec. I find this is very cool and surprising. I would have expected the RNAs to be degraded. #ismbeccb
359258513702264833 Jul 22 06:27 @pedrobeltrao PB suggest a competition to reproduce human reviews to help w discoverability and paper slincing #ISMBECCB
359258517288394752 Jul 22 06:27 @CLCbio OH at #ismbeccb: "You have the best t-shirt designs every year!" <-- true! First come, first served at booth #17 now :)
359258711618895872 Jul 22 06:28 @jonathancairns I'm also interested in recommendations RT @arneelof: Lunch any recommendations? #ismbeccb
359258971649343488 Jul 22 06:29 @DominiqueVanpee RT @karinv: Barend Mons "Why would I believe this triple?" narrative for data interpretation #beyondthepdf #nanopubs #ismbeccb
359259309412069376 Jul 22 06:31 @ISMBECCB New to #ismbeccb this year-Industry Lunch & Learn Workshops 12:45pm-2:00pm: BIOBASE in ICC Lounge 81 and Illumina in Hall 9.
359259356854222848 Jul 22 06:31 @DNADigest RT @sjcockell: Effective counts = how many counts would we see if there were no bias in our experiment #ismbeccb #KN3
359259488391823360 Jul 22 06:31 @DNADigest RT @GenomeBiology: #ismbeccb in future it may be possible to sequence genomes here on podium on USB key. for now there is no alternative for short reads - LP
359259489020542976 Jul 22 06:31 @rohitfarmer Time to present my awesome poster L013 in hall 14.2 #ISMBECCB @ISMBECCB
359259559707164673 Jul 22 06:32 @usegalaxyp .@jmchilton is presenting @pratikomics' Galaxy-P proteogenomics workflow at #ISMBECCB poster O097 right now. #usegalaxy-p
359259563071393792 Jul 22 06:32 @sciencestream RT @arneelof: Reasons not functional, functional at rna level or? Studied by RNA-seq #ismbeccb
359259789018542080 Jul 22 06:33 @BioMickWatson @danmaclean @AmyeKenall @GigaScience #ISMBECCB #WK3 I wants! !!
359259993708953600 Jul 22 06:33 @jomcentyre RT @pedrobeltrao: PB suggest a competition to reproduce human reviews to help w discoverability and paper slincing #ISMBECCB
359260187112525824 Jul 22 06:34 @DNADigest RT @ThomasKelder: Lior Pachter: "wrong does not cancel out wrong" in comparative sequence analysis. #ISMBECCB keynote
359260307698352128 Jul 22 06:35 @andrewjpage Come see my poster on assembling and improving 50000 pathogen genomes J03 at 14.2 #ISMBECCB
359260433791713281 Jul 22 06:35 @froggleston RT @andrewjpage: Come see my poster on assembling and improving 50000 pathogen genomes J03 at 14.2 #ISMBECCB
359260454264508416 Jul 22 06:35 @danmaclean RT @iddux: RT @bffo: From @SCEdmunds: the video to "Hitler tries to publish a scientific paper" http://www.youtube.com/watch?v=zF40XzwGA64 #WK3 #ISMBECCB @GigaScience
359260725232943104 Jul 22 06:36 @kastacholamine Paula Petrone (Roche) on searching cmpd collections by biosimilarity rather than chemical similarity - very nice approach #ismbeccb
359260838919946240 Jul 22 06:37 @DNADigest RT @sjcockell: Jan Baumbach is proving to his PhD student that he actually understands the work :) #ismbeccb #TT15
359260858993893376 Jul 22 06:37 @jmchilton RT @usegalaxyp: .@jmchilton is presenting @pratikomics' Galaxy-P proteogenomics workflow at #ISMBECCB poster O097 right now. #usegalaxy-p
359260909698813952 Jul 22 06:37 @DNADigest RT @sjcockell: JB talking about KeyPathwayMiner: http://keypathwayminer.mpi-inf.mpg.de/ #ismbeccb #TT15
359260999897317376 Jul 22 06:37 @kastacholamine Got to lunch way early to beat the line and actually see some posters. Food isn't any better when you didn't wait though :) #ismbeccb
359261566811643905 Jul 22 06:40 @froggleston Spot of lunch then into #PP42 and #PP48 this afternoon for polyploid haplotype assemblies and complexities of sequencing libraries #ismbeccb
359261764049199104 Jul 22 06:40 @DNADigest RT @GigaScience: Next up is Rebecca Lawrence from @F1000Research talking about data publishing & data peer-review initiatives #ISMBECCB #WK3
359261836568698880 Jul 22 06:41 @DNADigest RT @GigaScience: Rebecca first person to mention importance of open licensing. @creativecommons FTW! #ISMBECCB #WK3
359261927463477248 Jul 22 06:41 @DNADigest RT @iddux: @F1000Research uses post-publication peer-review. Open refereeing. Data inclusion. No access restriction. #ISMBECCB
359262027165863937 Jul 22 06:41 @AidanBudd Like/want to hear more about #unseminar/#unconference/#hackathon/alternative events? Then join us @ BoF 06 #ismb2013unconf today @ #ISMBECCB
359262200256413697 Jul 22 06:42 @PLOSCompBiol Get your questions ready: PLOS CB eds Daniel Mietchen, Scott Markel, Andreas Prlic & Thomas Lengauer are @ Booth 13 this lunchtime #ismbeccb
359262282909351936 Jul 22 06:42 @rohitfarmer Visit Poster L013 #ISMBECCB @ISMBECCB
359262433262989312 Jul 22 06:43 @DNADigest RT @danmaclean: @GigaScience Scott Edmunds up with Big Data publishing - data IS the paper #ISMBECCB
359262960294051840 Jul 22 06:45 @BioMickWatson Yet again we have a large conference where the Wifi can't cope. Why are we still bad at this? Is the message not getting through? #ISMBECCB
359263288648925185 Jul 22 06:46 @AidanBudd Tweet #ismb2013unconf if you'd like to do a flash talk @ #ismbeccb BoF to tell about #unseminar/#unconference/#hackathon/etc you've been to
359263411290386432 Jul 22 06:47 @Villavelius RT @karinv: Barend Mons "Why would I believe this triple?" narrative for data interpretation #beyondthepdf #nanopubs #ismbeccb
359264259047694336 Jul 22 06:50 @sciencestream RT @usegalaxyp: .@jmchilton is presenting @pratikomics' Galaxy-P proteogenomics workflow at #ISMBECCB poster O097 right now. #usegalaxy-p
359264260121432064 Jul 22 06:50 @sciencestream RT @BioMickWatson: @danmaclean @AmyeKenall @GigaScience #ISMBECCB #WK3 I wants! !!
359264261442646016 Jul 22 06:50 @sciencestream RT @andrewjpage: Come see my poster on assembling and improving 50000 pathogen genomes J03 at 14.2 #ISMBECCB
359264270728822784 Jul 22 06:50 @sciencestream RT @rohitfarmer: Visit Poster L013 #ISMBECCB @ISMBECCB
359264316484497408 Jul 22 06:51 @sciencestream RT @AidanBudd: Tweet #ismb2013unconf if you'd like to do a flash talk @ #ismbeccb BoF to tell about #unseminar/#unconference/#hackathon/etc you've been to
359265048902266880 Jul 22 06:53 @DNADigest RT @karinv: Barend Mons "Why would I believe this triple?" narrative for data interpretation #beyondthepdf #nanopubs #ismbeccb
359265165583187968 Jul 22 06:54 @frank_foerster Poster session at #ISMBECCB
359265197800034304 Jul 22 06:54 @DNADigest RT @pedrobeltrao: PB suggest a competition to reproduce human reviews to help w discoverability and paper slincing #ISMBECCB
359266824648540161 Jul 22 07:01 @PatrikKoskinen PANNZER - a high-troughput tool for functional annotation of proteins. Poster at Hall14.2 L07 #ISMBECCB #AFP13
359267579799822336 Jul 22 07:04 @sciencestream RT @PatrikKoskinen: PANNZER - a high-troughput tool for functional annotation of proteins. Poster at Hall14.2 L07 #ISMBECCB #AFP13
359268066741739520 Jul 22 07:05 @pedrobeltrao RT @AidanBudd: Tweet #ismb2013unconf if you'd like to do a flash talk @ #ismbeccb BoF to tell about #unseminar/#unconference/#hackathon/etc you've been to
359268281573982208 Jul 22 07:06 @Hack_in_a_Box RT @AidanBudd: Tweet #ismb2013unconf if you'd like to do a flash talk @ #ismbeccb BoF to tell about #unseminar/#unconference/#hackathon/etc you've been to
359268498263916544 Jul 22 07:07 @PLOSCompBiol NOW at Booth 13 #ismbeccb: PLOS CB eds Daniel Mietchen (Topic Pages Editor) and Scott Markel!
359268635795128321 Jul 22 07:08 @sk_ap #biobase CTO has a apple sticker at the back of his thinkpad, what's the message? #ismbeccb
359268940738228224 Jul 22 07:09 @sciencestream RT @PLOSCompBiol: NOW at Booth 13 #ismbeccb: PLOS CB eds Daniel Mietchen (Topic Pages Editor) and Scott Markel!
359268946673172480 Jul 22 07:09 @sciencestream RT @sk_ap: #biobase CTO has a apple sticker at the back of his thinkpad, what's the message? #ismbeccb
359269186385616897 Jul 22 07:10 @d_r_powell Illumina on BaseSpace : "You have an app in you!" #ISMBECCB
359269793041362944 Jul 22 07:12 @pedrobeltrao I am giving a talk on conditional genetic interactions today at 14 in hall 1.come fill the comically large room #ISMBECCB
359270105336651776 Jul 22 07:14 @Hoellenmotte Wheres poster E15 presenter? Looks like an interesting story #ISMBECCB
359270109421899776 Jul 22 07:14 @WonderMixTape Discussion of core competencies for bioinformatics & computational biology curriculum #ISMBECCB #BoF01
359271199983288320 Jul 22 07:18 @sciencestream RT @d_r_powell: Illumina on BaseSpace : "You have an app in you!" #ISMBECCB
359271209433042944 Jul 22 07:18 @sciencestream RT @pedrobeltrao: I am giving a talk on conditional genetic interactions today at 14 in hall 1.come fill the comically large room #ISMBECCB
359271215426723840 Jul 22 07:18 @sciencestream RT @Hoellenmotte: Wheres poster E15 presenter? Looks like an interesting story #ISMBECCB
359271222955483136 Jul 22 07:18 @sciencestream RT @WonderMixTape: Discussion of core competencies for bioinformatics & computational biology curriculum #ISMBECCB #BoF01
359271287367020544 Jul 22 07:18 @WonderMixTape Roles: Bioinformatics users/consumers; scientist/engineers - my question: are we training them for now or the future? #ISMBECCB #BoF01
359271765005975552 Jul 22 07:20 @winhide #ISMBECCB BioSharing establishing curated resource for determining how established a standard actually is
359271937668694016 Jul 22 07:21 @alegonbel cc @biosharing RT @winhide: #ISMBECCB BioSharing establishing curated resource for determining how established a standard actually is
359272075166773248 Jul 22 07:21 @biosharing RT @alegonbel: cc @biosharing RT @winhide: #ISMBECCB BioSharing establishing curated resource for determining how established a standard actually is
359272878145298432 Jul 22 07:25 @JonathanCFuller RT @AidanBudd: Tweet #ismb2013unconf if you'd like to do a flash talk @ #ismbeccb BoF to tell about #unseminar/#unconference/#hackathon/etc you've been to
359274048187936768 Jul 22 07:29 @JonathanCFuller Want to know what an #unseminar is? Find out today at #ISMBECCB #ismb2013unconf 1740 on Hall 10. See you there!
359275013536362500 Jul 22 07:33 @WonderMixTape Earlier report from ISCB Curriculum Task force http://tinyurl.com/lkjen2d #ISMBECCB #BoF01
359275279945973760 Jul 22 07:34 @laxvid Interesting discussion on what "bioinformatics" personnas are ? #ISMBECCB BOF
359275282865606656 Jul 22 07:34 @sciencestream RT @JonathanCFuller: Want to know what an #unseminar is? Find out today at #ISMBECCB #ismb2013unconf 1740 on Hall 10. See you there!
359275634515656705 Jul 22 07:36 @WonderMixTape Comment on 3 pillars of training for bioinformatics/ comp bio: Biology, Computer Science and Math/Statistics #ISMBECCB #BoF01
359275935079473152 Jul 22 07:37 @WonderMixTape Suggestion of 4th Pillar: Communication - I would add to that Critical Thinking #ISMBECCB #BoF01
359276005145321475 Jul 22 07:37 @SahaSurya +1 RT @bffo: Pachter: Mol Bio assays all being converted 2 #sequencing, least of which will b 2 actually sequence genomic DNA #ISMBECCB #KN3
359276193377304576 Jul 22 07:38 @alegonbel @dagmarwaltemath @biosharing @winhide the catalogue is here: http://biosharing.org, resource owners can maintain their entries #ISMBECCB
359276545333927937 Jul 22 07:39 @pjacock .@BioMickWatson during #ISMBECCB SIG meetings the #wifi was generally OK, seems it can’t cope with everyone at main conference :(
359278251299962884 Jul 22 07:46 @alegonbel MT @biosharing: #ISMBECCB @dagmarwaltemath @winhide: initial criteria work in progress w/ collaborators, see slide 8 http://www.slideshare.net/SusannaSansone/biosharing-sansonedryadmay13
359278402001309696 Jul 22 07:47 @i_am_kilpatrick RT @ISMBECCB: Woohoo! RT @rtraborn Be proud, ISMB delegates- as of this moment #ISMBECCB is out-trending #RoyalBaby http://t.co/QTKO95DjkG
359278749960794112 Jul 22 07:48 @Slmorg Poster presentation going well! #ISMBECCB http://t.co/MCozK4bBFF
359279105117667328 Jul 22 07:49 @WonderMixTape Great publicity at #ISMBECCB for VIZBI 2014 http://www.vizbi.org/2014/ @vizbi #Data #Visualization
359279509675061249 Jul 22 07:51 @cjmoneill An interesting example of crowdsourced #peerreview http://bit.ly/12bzzvB #ISMBECCB #openaccess
359279671227060224 Jul 22 07:52 @MilesCollier RT @CLCbio: Remember to stop by our booth in the lunch break today - free BLAST t-shirts: http://t.co/Nr8kbKa6hv #ismbeccb
359280077143826432 Jul 22 07:53 @sciencestream RT @laxvid: Interesting discussion on what "bioinformatics" personnas are ? #ISMBECCB BOF
359280077361528833 Jul 22 07:53 @janosbinder RT @JonathanCFuller: Want to know what an #unseminar is? Find out today at #ISMBECCB #ismb2013unconf 1740 on Hall 10. See you there!
359280078402117632 Jul 22 07:53 @sciencestream RT @WonderMixTape: Comment on 3 pillars of training for bioinformatics/ comp bio: Biology, Computer Science and Math/Statistics #ISMBECCB #BoF01
359280079924649984 Jul 22 07:53 @sciencestream RT @WonderMixTape: Suggestion of 4th Pillar: Communication - I would add to that Critical Thinking #ISMBECCB #BoF01
359280083930206208 Jul 22 07:53 @sciencestream RT @pjacock: .@BioMickWatson during #ISMBECCB SIG meetings the #wifi was generally OK, seems it can’t cope with everyone at main conference :(
359280085066846208 Jul 22 07:53 @sciencestream RT @alegonbel: MT @biosharing: #ISMBECCB @dagmarwaltemath @winhide: initial criteria work in progress w/ collaborators, see slide 8 http://t.co/dlFnrm0d4N
359280085872160768 Jul 22 07:53 @sciencestream RT @Slmorg: Poster presentation going well! #ISMBECCB http://t.co/MCozK4bBFF
359280086903975936 Jul 22 07:53 @sciencestream RT @WonderMixTape: Great publicity at #ISMBECCB for VIZBI 2014 http://www.vizbi.org/2014/ @vizbi #Data #Visualization
359280087877038080 Jul 22 07:53 @sciencestream RT @cjmoneill: An interesting example of crowdsourced #peerreview http://bit.ly/12bzzvB #ISMBECCB #openaccess
359280146575933440 Jul 22 07:53 @AlonKeinan Terrible wifi discouraged me from tweeting today's talks. happens when you put 2 thousand computer scientists on a network. #ismbeccb
359280667554611200 Jul 22 07:56 @AidanBudd Good stuff; they're great events MT @WonderMixTape: Gr8 publicity @ #ISMBECCB 4 VIZBI2014 http://www.vizbi.org/2014/ @vizbi #Data #Visualization
359280691873185792 Jul 22 07:56 @mishdalton RT @cjmoneill: An interesting example of crowdsourced #peerreview http://bit.ly/12bzzvB #ISMBECCB #openaccess
359280845942571008 Jul 22 07:56 @i_am_kilpatrick Really looking forward to Gary Stormo's keynote on finding signals in sequence later - right up my street! #ISMBECCB #KN4
359281132329639936 Jul 22 07:57 @vangos The 1st poster session at #ISMBECCB is almost over, but here are a few I liked:
359281137731899394 Jul 22 07:57 @PLOSCompBiol #ismbeccb Join today’s workshop on education in bioinformatics to see @PLOSCompBiol eds @Rbaltman & Donna Slonim as they present parts A & B
359281524157739008 Jul 22 07:59 @VickySchneiderG RT @PLOSCompBiol: #ismbeccb Join today’s workshop on education in bioinformatics to see @PLOSCompBiol eds @Rbaltman & Donna Slonim as they present parts A & B
359282043584528384 Jul 22 08:01 @VickySchneiderG RT @GigaScience: Phil Bourne on what needs fixing in the research cycle #wk3 #ismbeccb http://t.co/eO3PiaaA0P
359282509550338049 Jul 22 08:03 @vangos "Metabolic Modeling of glioblastoma subtypes", nice reconstruction work. #ISMBECCB http://t.co/EzlzZEQcjr
359282927407874049 Jul 22 08:04 @vangos "An optimisation approach for pathway activity inference" and a shoutout to my PhD supervisors. #ISMBECCB http://t.co/z9aD3Rh1Id
359283473111986176 Jul 22 08:07 @vangos "A 13C-based method for intracellular metabolic flux measurement and prediction" #ISMBECCB http://t.co/JOD7gszhln
359283789396049920 Jul 22 08:08 @michautbioinfo RT @AidanBudd: Tweet #ismb2013unconf if you'd like to do a flash talk @ #ismbeccb BoF to tell about #unseminar/#unconference/#hackathon/etc you've been to
359284184965054465 Jul 22 08:09 @vangos "Mechanistic and dynamic model for T helper 17 cell differentiation", by old @ISBUSA colleague #ISMBECCB http://twitter.com/vangos/status/359282174911971330/photo/1
359284213897375745 Jul 22 08:10 @Alfons_Valencia Bioinformatics (the journal) associate editors meeting at #ISMBECCB. Thanks to our authors, referees & editors the journal is flying high.
359284369866764288 Jul 22 08:10 @GenomeAnalysis Workshop on Education in Bioinformatics starting now at the Roof 'Garden' #ISMBECCB http://t.co/zsk8lDXxDA
359284607247581188 Jul 22 08:11 @tehancocks Training/Education for clinical and public audiences #ISMBECCB
359284671911170048 Jul 22 08:11 @sjcockell Technology Track session in hall 9 is missing a chair (and an audience, to be fair) #ismbeccb
359284788999368708 Jul 22 08:12 @cathbrooksbank Excellent discussion in the curriculum BOF - we're going to create personas to help us. Yay! #ISMBECCB
359284881223720961 Jul 22 08:12 @AleksiKallio Apparently #ismbeccb conference organisers just decided to ban Dilbert and XKCD comics on their WiFi. Hopefully helps with network traffic..
359284975910141952 Jul 22 08:13 @anilthanki RT @GenomeAnalysis: Workshop on Education in Bioinformatics starting now at the Roof 'Garden' #ISMBECCB http://t.co/zsk8lDXxDA
359285045107765248 Jul 22 08:13 @lenovere #ismbeccb EBI's Pedro Beltrao on genetic interaction in yeast stress response pathways http://www.ebi.ac.uk/research/beltrao
359285101118492672 Jul 22 08:13 @sjcockell GenomeRNAi - a phenotype database for large-scale RNAi screens #ismbeccb #TT22
359285137344708608 Jul 22 08:13 @tehancocks Russ Altma, 30 years of translational Bioinfo training @ Stanford #ISMBECCB
359285190192934912 Jul 22 08:13 @jmchilton Next up genomespace. #ISMBECCB
359285284174708736 Jul 22 08:14 @team_myGrid Start of @genomespace talk at #ismbeccb - 10k tools and 5k databases - eeek.
359285311190204416 Jul 22 08:14 @larsjuhljensen Go Pedro! Go Pedro! Go Pedro! :-) #ISMBECCB #SS04 #BloggersUnite
359285328080683008 Jul 22 08:14 @cathbrooksbank @Rbaltman talking about teaching translational bioinformatics NOW in the roof garden #ISMBECCB
359285367733620738 Jul 22 08:14 @vangos "Isotope cluster-based compound matching in GC/MS for non-targeted metabolomics" by colleague Andre Wegner #ISMBECCB http://twitter.com/vangos/status/359284982616821762/photo/1
359285392811368448 Jul 22 08:14 @sjcockell Genome wide RNAi experiments are a rich source of functional & phenotype data #ismbeccb #TT22
359285563591262208 Jul 22 08:15 @sciencestream RT @Alfons_Valencia: Bioinformatics (the journal) associate editors meeting at #ISMBECCB. Thanks to our authors, referees & editors the journal is flying high.
359285566556610560 Jul 22 08:15 @sciencestream RT @GenomeAnalysis: Workshop on Education in Bioinformatics starting now at the Roof 'Garden' #ISMBECCB http://t.co/zsk8lDXxDA
359285674144305153 Jul 22 08:15 @sjcockell GenomeRNAi is intended to integrate & distribute this data. Collects metadata according to an annotation guide #ismbeccb #TT22
359285748903591937 Jul 22 08:16 @jergosh RT @lenovere: #ismbeccb EBI's Pedro Beltrao on genetic interaction in yeast stress response pathways http://www.ebi.ac.uk/research/beltrao
359285921344004096 Jul 22 08:16 @sjcockell GenomeRNAi contains 145 human experiments and 174 drosophila #ismbeccb #TT22
359285988621033472 Jul 22 08:17 @VickySchneiderG RT @GenomeAnalysis: Workshop on Education in Bioinformatics starting now at the Roof 'Garden' #ISMBECCB http://t.co/zsk8lDXxDA
359286179570909184 Jul 22 08:17 @arneelof RT @team_myGrid: Start of @genomespace talk at #ismbeccb - 10k tools and 5k databases - eeek.
359286304573358082 Jul 22 08:18 @sjcockell I’m intrigued, what does the Hippo pathway do? #hivemind #ismbeccb #TT22
359286460148490240 Jul 22 08:19 @arneelof RNAi not reproducible across labs #ismbeccb
359286700553416706 Jul 22 08:19 @RomainStuder RT @lenovere: #ismbeccb EBI's Pedro Beltrao on genetic interaction in yeast stress response pathways http://www.ebi.ac.uk/research/beltrao
359286779444068354 Jul 22 08:20 @sjcockell GenomeRNAi has a very clean looking website. Experiment and gene level views #ismbeccb #TT22
359286865649606658 Jul 22 08:20 @froggleston #PP42 HapCompass tool for haplotype assembly. Extending diploid graph models into polyploids. Various methods to handle cycles #ISMBECCB
359286968729235456 Jul 22 08:21 @sciencestream RT @sjcockell: GenomeRNAi is intended to integrate & distribute this data. Collects metadata according to an annotation guide #ismbeccb #TT22
359286969924587520 Jul 22 08:21 @sciencestream RT @sjcockell: GenomeRNAi contains 145 human experiments and 174 drosophila #ismbeccb #TT22
359286970838949888 Jul 22 08:21 @sciencestream RT @sjcockell: I’m intrigued, what does the Hippo pathway do? #hivemind #ismbeccb #TT22
359286971744931840 Jul 22 08:21 @sciencestream RT @arneelof: RNAi not reproducible across labs #ismbeccb
359287039373484034 Jul 22 08:21 @sjcockell Here’s that website http://genomernai.dkfz.de/GenomeRNAi/ #ismbeccb #TT22
359287189177241600 Jul 22 08:21 @larsjuhljensen Interesting idea: comparison of conditional genetic data with regulatory information under same conditions #ISMBECCB #SS04
359287455200972800 Jul 22 08:22 @sjcockell GenomeRNAi uses Dalliance to provide the genome browser http://www.biodalliance.org/ #ismbeccb #TT22
359287466932449280 Jul 22 08:23 @cathbrooksbank @Rbaltman's number 1 recommendation for a translational bioinformatics course - expose students to the clinic #ISMBECCB
359287654565044224 Jul 22 08:23 @emblebi RT @pedrobeltrao: I am giving a talk on conditional genetic interactions today at 14 in hall 1.come fill the comically large room #ISMBECCB
359287654653100032 Jul 22 08:23 @Slmorg Good to see - ELSI as core part of bioinf education, Russ Altman #ISMBECCB education workshop
359287770486808577 Jul 22 08:24 @cathbrooksbank @Rbaltman's no. 2 recommendation for a translational bioinformatics course - access to electronic medical record sandbox #ISMBECCB
359287993900605440 Jul 22 08:25 @cathbrooksbank No. 3 - understanding of human subjects #ISMBECCB
359288166509182976 Jul 22 08:25 @cathbrooksbank RT @Slmorg: Good to see - ELSI as core part of bioinf education, Russ Altman #ISMBECCB education workshop
359288182883352579 Jul 22 08:25 @GenomeRef "A new version of the human reference genome, GRCh38, will be released later this year. More details at poster G20. #ismbeccb"
359288217289621504 Jul 22 08:26 @sciencestream RT @sjcockell: Here’s that website http://genomernai.dkfz.de/GenomeRNAi/ #ismbeccb #TT22
359288354942107648 Jul 22 08:26 @sjcockell GenomeRNAi has a submission template and they wish more experimentalists would use it. Most data added post-pub by curators #ismbeccb #TT22
359288951967715329 Jul 22 08:28 @cathbrooksbank Challenges of Stanford translational bx course - students want to be users, not methodologists #ISMBECCB
359289268557979649 Jul 22 08:30 @sjcockell GenomeRNAi has reciprocal links with UniProt and GeneCards #ismbeccb #TT22
359289273469501441 Jul 22 08:30 @cathbrooksbank Stanford translational bx grads don't want to be service oriented - need an 'intellectual' home (oooph!) #ISMBECCB
359289771895431169 Jul 22 08:32 @sjcockell Screen comparison tool is cool - one place to compare a list of genes across screens #ismbeccb #TT22
359290107322306562 Jul 22 08:33 @anilthanki @pjacock @CameronNeylon @galaxyproject Here you go, another one on bitbucket is @genomespace #ISMBECCB #TT23
359290246409617408 Jul 22 08:34 @Hoellenmotte Jonathan Woodsmith on post-translational modifications in PPI networks now in Hall 1 #ISMBECCB #ss04
359290284347101184 Jul 22 08:34 @frank_foerster #ISMBECCB #LBR14 @rfschwarz will talk about Phylogenetic quantification of intra-tumor heterogeneity
359290580066922496 Jul 22 08:35 @RowCropsPath RT @danmaclean: Big thing for the future - nanopubs. Not a hostelry, but publish little and often #ISMBECCB
359290966810693632 Jul 22 08:36 @larsjuhljensen @ISMBECCB #ISMBECCB #ismbnetworking +4net A "scoreboard" to motivate many, high-quality contributions.
359290999098454016 Jul 22 08:37 @cathbrooksbank @Rbaltman says if you teach MDs to see what they don't know in bx, some decide to learn more, others now know who to talk to #ISMBECCB
359291129084133376 Jul 22 08:37 @lenovere #ismbeccb Jonathan woodsmith on post-translational modifications in prot interaction networks
359291250194644992 Jul 22 08:38 @larsjuhljensen @ISMBECCB #ISMBECCB #ismbnetworking +4net Good search function to avoid repetitive questions/discussions.
359291257006194690 Jul 22 08:38 @sebhtml RT @sk_ap: #biobase CTO has a apple sticker at the back of his thinkpad, what's the message? #ismbeccb
359291343383691264 Jul 22 08:38 @cathbrooksbank @rbaltman - med students need to know statistics, statistics, statistics, then maybe a bit of programming #ISMBECCB
359291347972259842 Jul 22 08:38 @tehancocks @Rbaltman "statistics, statistics, statistics, then programming. It doesn't matter if they don't get to programming" #ISMBECCB
359291467698679809 Jul 22 08:38 @NetCommBioinf RT @larsjuhljensen: @ISMBECCB #ISMBECCB #ismbnetworking +4net Good search function to avoid repetitive questions/discussions.
359291520291061760 Jul 22 08:39 @larsjuhljensen @ISMBECCB #ISMBECCB #ismbnetworking +4me +4net A friendly and open atmosphere.
359291674373005312 Jul 22 08:39 @larsjuhljensen @ISMBECCB #ISMBECCB #ismbnetworking -4net Too high newbie:expert ratio.
359291814152781824 Jul 22 08:40 @tehancocks Up next is Donna Slonim from Tufts talking on teaching clinicians bioinfo #ISMBECCB
359292073129672704 Jul 22 08:41 @larsjuhljensen @ISMBECCB #ISMBECCB #ismbnetworking -4net Prolific, opinionated participants.
359292078993727488 Jul 22 08:41 @markwassy RT @Alfons_Valencia: Bioinformatics (the journal) associate editors meeting at #ISMBECCB. Thanks to our authors, referees & editors the journal is flying high.
359292176334729216 Jul 22 08:41 @sjcockell #TT24 is about Europe PubMed Central http://europepmc.org/ #ismbeccb
359292195259424769 Jul 22 08:41 @cathbrooksbank @dkslonim talking about teaching MDs about bioinformatics #ISMBECCB
359292247138766848 Jul 22 08:42 @RomainStuder Posters not removed by the designated time (3:30pm) may be taken down by the organizers and discarded. http://www.iscb.org/cms_addon/conferences/ismbeccb2013/posterlist.php#schedule #ISMBECCB
359292490743955456 Jul 22 08:42 @sjcockell Europe PMC has 28 million abstracts and 2.6 million full-text articles #ismbeccb #TT24
359292575561162753 Jul 22 08:43 @winhide @Rbaltman #ISMBECCB Teach bioinformatics to MDs or scientists to combine omics/med records, refuse statisticians who refuse to learn biology
359292806088495104 Jul 22 08:44 @sjcockell Rebrand and prettyfication last year (from UK to Europe - due to funding) #ismbeccb #TT24
359292911113863170 Jul 22 08:44 @cathbrooksbank @dkslonim says gaps in clinicans' thinking include genetics, systems thinking, discrete maths. #ISMBECCB
359293015674093568 Jul 22 08:45 @cathbrooksbank RT @sjcockell: Europe PMC has 28 million abstracts and 2.6 million full-text articles #ismbeccb #TT24
359293089963192320 Jul 22 08:45 @larsjuhljensen Most of which cannot be text mined. RT @sjcockell Europe PMC has 28 million abstracts and 2.6 million full-text articles #ismbeccb #TT24
359293130505322498 Jul 22 08:45 @sjcockell 600,000 OA articles available for re-use (and remix?) #ismbeccb #TT24
359293213518987267 Jul 22 08:45 @arneelof Compressive genomics to save us from exponentially #ismbeccb koblastp
359293601538252800 Jul 22 08:47 @bffo RT @winhide: @Rbaltman #ISMBECCB Teach bioinformatics to MDs or scientists to combine omics/med records, refuse statisticians who refuse to learn biology
359293627555520513 Jul 22 08:47 @i_am_kilpatrick Interesting semantic enrichment for article abstracts in Europe PMC #ISMBECCB #TT24
359293637387386880 Jul 22 08:47 @BioMedCentral RT @cjmoneill: An interesting example of crowdsourced #peerreview http://bit.ly/12bzzvB #ISMBECCB #openaccess
359293678671499265 Jul 22 08:47 @McDawg @sjcockell Pity the amout on #OA content is is not MUCH higher. #ismbeccb #TT24
359293712947359744 Jul 22 08:47 @sjcockell Europe PMC are not allowed to use semantic enhancement on their own corpus, thanks to publishers #ismbeccb #TT24
359293832749268992 Jul 22 08:48 @globalscientia RT @cjmoneill: An interesting example of crowdsourced #peerreview http://bit.ly/12bzzvB #ISMBECCB #openaccess
359293864776957953 Jul 22 08:48 @McDawg RT @sjcockell: Europe PMC are not allowed to use semantic enhancement on their own corpus, thanks to publishers #ismbeccb #TT24
359294136936960000 Jul 22 08:49 @sjcockell RESTful web services - JSON & XML, including full text (for OA set only, of course) #ismbeccb #TT24
359294159787532288 Jul 22 08:49 @i_am_kilpatrick RT @sjcockell: Europe PMC are not allowed to use semantic enhancement on their own corpus, thanks to publishers #ismbeccb #TT24
359294201236058112 Jul 22 08:49 @karinv RT @sjcockell: Europe PMC are not allowed to use semantic enhancement on their own corpus, thanks to publishers #ismbeccb #TT24
359294219661225985 Jul 22 08:49 @larsjuhljensen RT @sjcockell: Europe PMC are not allowed to use semantic enhancement on their own corpus, thanks to publishers #ismbeccb #TT24
359294277219663872 Jul 22 08:50 @cathbrooksbank @dkslonim says no med schools in US require statistics as a prerequisite yet - but this is changing. Harvard will from 2016. #ISMBECCB
359294301424975874 Jul 22 08:50 @pfanderson RT @sjcockell: Europe PMC are not allowed to use semantic enhancement on their own corpus, thanks to publishers #ismbeccb #TT24
359294469767577601 Jul 22 08:50 @sjcockell Integrating literature and data - there’s a lot literature could learn from databases (re: citation) #ismbeccb #TT24
359294520719978496 Jul 22 08:51 @pfanderson @sjcockell @McDawg If this is PMC and open content, how are the publishers shutting it down? #ismbeccb #tt24
359294690556141568 Jul 22 08:51 @DominiqueVanpee RT @larsjuhljensen: Interesting idea: comparison of conditional genetic data with regulatory information under same conditions #ISMBECCB #SS04
359294930981629953 Jul 22 08:52 @jamesmalone Accidentally coined new buzz word at #ismbeccb for biordf work we're doing: #rdfapps future is small but useful apps built on top of bio rdf
359295119402340352 Jul 22 08:53 @cathbrooksbank Tufts is teaching bioinformatics to undergrads who will go to med school - is this the beginning of a sea change? #ISMBECCB
359295131528077312 Jul 22 08:53 @sjcockell Done lots of work on pulling data citations out of literature. Ref: http://www.plosone.org/article/info:doi/10.1371/journal.pone.0063184 #ismbeccb #TT24
359295204374749184 Jul 22 08:53 @McDawg @pfanderson Pass, I'm not at #ismbeccb #tt24 in person @sjcockell
359295239728537602 Jul 22 08:53 @bffo RT @VickySchneiderG: @bffo making me :-) and @GenomeAnalysis very proud!!!! http://t.co/tyiQe33ccV #ISMBECCB
359295294178983936 Jul 22 08:54 @i_am_kilpatrick Not just funders wanting OA to data! Reuse of data/confirmation of results v important in science in general #ISMBECCB #TT24
359295394297024513 Jul 22 08:54 @upmbbs RT @GenomeBiology: #ismbeccb uh-oh: The Moore's law slide.
359295630721560578 Jul 22 08:55 @jonathancairns #ismbeccb #LBR14 Roland Schwarz looking at copy number heterogeneity among tumour samples
359295642633379840 Jul 22 08:55 @sjcockell PMC Europe interested in publishing grey literature (cc @phillord) #ismbeccb #TT24
359295813714845699 Jul 22 08:56 @SahaSurya +1 RT @winhide: @Rbaltman #ISMBECCB Teach bioinfo to MDs/scientists to combine omics/med, refuse statisticians who refuse to learn bio
359295857566298113 Jul 22 08:56 @cathbrooksbank What to include in bx intro for medics - informed tool use; enough maths to do so; intro scripting (perl, python) - @dkslonim at #ISMBECCB
359296194108866562 Jul 22 08:57 @cathbrooksbank @dkslonim says pair programming may address student frustration with programming. Would love to learn more about this. #ISMBECCB
359296195123888129 Jul 22 08:57 @Slmorg Like the idea of pair programming, but need to know your student group well? #ISMBECCB education - donna slonim
359296233837711360 Jul 22 08:57 @pjacock RT @sjcockell: Europe PMC are not allowed to use semantic enhancement on their own corpus, thanks to publishers #ismbeccb #TT24
359296484744769537 Jul 22 08:58 @EvoMRI RT @GigaScience: Phil Bourne on how to get involved: join Force11 @force11rescomm http://www.force11.org/ #BtPDF2 #WK3 #ISMBECCB
359296653796196352 Jul 22 08:59 @sjcockell Joining Europe PMC & @ORCID_Org - should be released next week #ismbeccb #TT24
359307623306235904 Jul 22 09:43 @froggleston @tehancocks @winhide #ISMBECCB Not sure of the point here.
359307854982819842 Jul 22 09:44 @sjcockell Rattly catering guy stacking glasses during talk not ideal #ismbeccb
359308170600005633 Jul 22 09:45 @jonathancairns Ah, here's one for my non-scientific followers. "Bioinformatics for the Public Eye". #ISMBECCB #WK04D
359308190913413120 Jul 22 09:45 @Hoellenmotte RT @jonathancairns: "Gorilla sperm is very difficult to obtain. ... I won't go into the details." #ISMBECCB #PP48
359308228527521793 Jul 22 09:45 @sjcockell GeneWeaver allows a researcher to find relevant datasets from a variety of sources #ismbeccb #TT27 #earworm
359308236752949248 Jul 22 09:45 @sciencestream RT @sjcockell: Pity the UniProt beta is not available now - would be more likely to get useful feedback #ismbeccb #TT26
359308245586149376 Jul 22 09:45 @sciencestream RT @laxvid: Hienke Sminia from @NBIC_nl great presentation and wonderful ideas for reaching the general audience #ISMBECCB
359308497571573760 Jul 22 09:46 @DNADigest RT @laxvid: Hienke Sminia from @NBIC_nl great presentation and wonderful ideas for reaching the general audience #ISMBECCB
359308599006208002 Jul 22 09:47 @cathbrooksbank @winhide says we need an X Prize to develop an interface to enable the public to understand their genome data. #ISMBECCB
359308601342431232 Jul 22 09:47 @Chris_Evelo Max Kotlyar #ismbeccb #ss04 A PPI may be important in a tissue if the participating genes are expressed relatively high in that tissue.
359308616861351938 Jul 22 09:47 @dagmarwaltemath "... and then teach NSA *how* to actually analyse it..." I declare this my fav talk at #ismbeccb so far.
359308872450064384 Jul 22 09:48 @arneelof RT @dagmarwaltemath: "... and then teach NSA *how* to actually analyse it..." I declare this my fav talk at #ismbeccb so far.
359309021213655041 Jul 22 09:48 @DNADigest RT @cathbrooksbank: Hienke Sminia talking about what does _everybody_ need to know about bioinformatics #ISMBECCB
359309035297705986 Jul 22 09:48 @sjcockell I’m sure GeneWeaver is great if you know what you’re doing, but I’m baffled #ismbeccb #TT27 #earworm
359309119657746433 Jul 22 09:49 @jonathancairns "Information looks scientific, but it has been changed as it travels through the media." - on fat genes, gay genes etc #ISMBECCB #WK04D
359309476135833601 Jul 22 09:50 @iysik_com @F1000Posters Uploading my #ISMBECCB poster, wouldn't that effectively be publishing my results? Couldn't it hamper publishing a paper??
359309935479242754 Jul 22 09:52 @Chris_Evelo MK tissue specificity off PPIs is often more significant at the periphery of the PPI networks. #ISMBECCB #ss04
359310039539916800 Jul 22 09:52 @jonathancairns We're now getting the computational biology equivalents of "can you put the internet on this floppy disk?" #ISMBECCB #WK04D
359310601635368960 Jul 22 09:54 @cathbrooksbank @winhide says we need to have dedicated trainers to solve the problem of public understanding of bx. Hear, hear! #ISMBECCB
359310634426437632 Jul 22 09:55 @Feargal_Ryan Another free t shirt, some sweets, pens, and a mouse pad. Good haul. #ISMBECCB
359310969685540864 Jul 22 09:56 @chrisftaylor EAR = Encourage, Acknowledge and Reward. #firstcatchyouracronym #datasharing #ismbeccb
359311145511178240 Jul 22 09:57 @isatools @SCEdmunds of @gigascience ISMB talk on Big Data Publishing icluding use of @isatools! Slides at http://www.slideshare.net/GigaScience/scott-edmunds-ismb-talk-on-big-data-publishing #ISMBECCB #WK3
359311148664885248 Jul 22 09:57 @jonathancairns Oh no, it's time for ENCODE can of worms. "Is most of our DNA devoid of purpose or does it play a major role in our cells?" #ISMBECCB #WK04D
359311182307393538 Jul 22 09:57 @simon_t RT @bffo: #Bioinformatics Bingo: "Big data" @winhide #ISMBECCB
359311184790437889 Jul 22 09:57 @sjcockell K-Partite graph analysis. Eep. #ismbeccb #TT27
359311239421243392 Jul 22 09:57 @cathbrooksbank @winhide discussing @ewanbirney and junk DNA as example of controversy as a tool for public engagement #ISMBECCB
359311468593815553 Jul 22 09:58 @jonathancairns Aw yeah! The speaker just read out one of my tweets! I'M FAMOUS! #ISMBECCB #WK04D
359311751147307009 Jul 22 09:59 @biosharing RT @jomcentyre: F1000Research uses accredited repositories - lots of accredited systems - @biosharing and BioDBcore in biology #ISMBECCB
359312072179744768 Jul 22 10:00 @suchprettyeyes RT @cjmoneill: An interesting example of crowdsourced #peerreview http://bit.ly/12bzzvB #ISMBECCB #openaccess
359312073576022017 Jul 22 10:00 @rtraborn Misook Ha: -18000 genes fit into 10 distinct groups by arrangement of histone marks/DNA methylation patterns around TSS #ismbeccb #PP54
359312491488505856 Jul 22 10:02 @sciencestream RT @jonathancairns: Ah, here's one for my non-scientific followers. "Bioinformatics for the Public Eye". #ISMBECCB #WK04D
359312550464196609 Jul 22 10:02 @cathbrooksbank @_StemBook mentioned by @winhide as lovely example of teaching public understanding of science - narrative linked to data. #ISMBECCB
359312954715418624 Jul 22 10:04 @bffo MT @jonathancairns: Aw yeah! @winhide just read out one of my tweets! I'M FAMOUS! #ISMBECCB #WK04D
359312994422886400 Jul 22 10:04 @tehancocks Peer review and micro-accreditation for course material in bioinformatics training? Driver for quality in training @winhide #ISMBECCB
359313257657794560 Jul 22 10:05 @cathbrooksbank @winhide on how to find training material that doesn't suck - having a DOI for your training material and peer review - yay! #ISMBECCB
359313323742855168 Jul 22 10:05 @GigaScience Interesting @winhide idea of giving DOIs for training materials. Could student ratings be equivalent to peer review? #wk4 #ismbeccb
359313547508989954 Jul 22 10:06 @jonathancairns Training in bioinformatics difficult to do at scale. "We have to commoditise it." - @winhide #ISMBECCB #WK04D
359314091174666241 Jul 22 10:08 @rtraborn A nice talk by M. Ha. Will need more time to evaluate the 'Chromatin Remodeling Hypothesis' she presented but her data were good. #ismbeccb
359314146271043585 Jul 22 10:09 @AidanBudd .@winhide looking 4 someone 2 provide training environment 4 Harvard researchers. Great to see resources being allocated for that #ISMBECCB
359314387128946688 Jul 22 10:10 @cathbrooksbank How do you balance commoditisation of training with open access? @winhide says freemium: give away but charge for premium. #ISMBECCB hmm...
359314591869706240 Jul 22 10:10 @mital14 RT @emblebi: Interested in online training? Visit @emblebi at booth 6 for a free 'love data' mouse mat or screen cloth! #ISMBECCB
359315696645189632 Jul 22 10:15 @Chris_Evelo Free T-shirts at CLC-bio boot. Didn't know they had that many users... #ismbeccb
359317353596997633 Jul 22 10:21 @sciencestream RT @bffo: MT @jonathancairns: Aw yeah! @winhide just read out one of my tweets! I'M FAMOUS! #ISMBECCB #WK04D
359317471448535040 Jul 22 10:22 @sciencestream RT @jonathancairns: Training in bioinformatics difficult to do at scale. "We have to commoditise it." - @winhide #ISMBECCB #WK04D
359317506240294912 Jul 22 10:22 @sciencestream RT @Chris_Evelo: Free T-shirts at CLC-bio boot. Didn't know they had that many users... #ismbeccb
359318141878276097 Jul 22 10:24 @tehancocks Beach party after the conference dinner? I was hoping to catch up on sleep and rest my feet. Oh dear... #ISMBECCB
359318779005632512 Jul 22 10:27 @OpenHelix RT @jonathancairns: Training in bioinformatics difficult to do at scale. "We have to commoditise it." - @winhide #ISMBECCB #WK04D
359319342640406528 Jul 22 10:29 @benfulton Differentiate between app DESIGNERS and RUNNERS RT @jonathancairns: Training in bioinformatics difficult to do at scale. @winhide #ISMBECCB
359319399112523778 Jul 22 10:29 @cbioportal cBioPortal talk and live demo tomorrow at ISMB in Berlin. 11 AM, Hall 7. #ISMBECCB #PP61
359319551194169344 Jul 22 10:30 @sciencestream RT @tehancocks: Beach party after the conference dinner? I was hoping to catch up on sleep and rest my feet. Oh dear... #ISMBECCB
359319567564570624 Jul 22 10:30 @sciencestream RT @cbioportal: cBioPortal talk and live demo tomorrow at ISMB in Berlin. 11 AM, Hall 7. #ISMBECCB #PP61
359320047526752256 Jul 22 10:32 @TGACBrowser Poster is up for viewing #B14 #ISMBECCB come and talk to @anilthanki for more details http://t.co/3Sba9fC4mx
359320130318118912 Jul 22 10:32 @sjcockell Up in the gods for #KN4 *squints at screen* #ismbeccb
359320308240908289 Jul 22 10:33 @VickySchneiderG RT @TGACBrowser: Poster is up for viewing #B14 #ISMBECCB come and talk to @anilthanki for more details http://t.co/3Sba9fC4mx
359320338716307457 Jul 22 10:33 @RomainStuder RT @jonathancairns: "Gorilla sperm is very difficult to obtain. ... I won't go into the details." #ISMBECCB #PP48
359320393662091264 Jul 22 10:33 @froggleston RT @TGACBrowser: Poster is up for viewing #B14 #ISMBECCB come and talk to @anilthanki for more details http://t.co/3Sba9fC4mx
359320502738759684 Jul 22 10:34 @Chris_Evelo Getting ready for #ismbeccb #kn4. Gary Stormo. "Searching for Signals in Sequences"
359320563937837056 Jul 22 10:34 @larsjuhljensen Getting ready for Gary Stormo's #KN4 #ISMBECCB
359321016289341443 Jul 22 10:36 @Chris_Evelo Beach Party at #ismbeccb (could someone repeat where?) just wear beachwear. Yeah, I always bring that to conferences, just in case...
359321145419378688 Jul 22 10:36 @jonathancairns RT @Chris_Evelo: Beach Party at #ismbeccb (could someone repeat where?) just wear beachwear. Yeah, I always bring that to conferences, just in case...
359322042237063168 Jul 22 10:40 @RomainStuder Gary D. Stormo, cited more than 18,000 times ! http://scholar.google.co.uk/citations?user=MaWAbMcAAAAJ&hl=en&oi=ao #ISMBECCB
359322071513305088 Jul 22 10:40 @jonathancairns Stormo's talk at #RegGen last year was absolutely terrific. Really looking forward to #KN4 #ISMBECCB
359322077305634817 Jul 22 10:40 @Chris_Evelo @jonathancairns two S-bahn stations from where the #ismbeccb dinner is. Which brings uo "do they expect us to wear that already at dinner?"
359322209984053248 Jul 22 10:41 @frank_foerster #ISMBECCB #KN4 Gary Stormo will talk about Searching for Signals in Sequences
359322492730486785 Jul 22 10:42 @Chris_Evelo @iysik_com @jonathancairns think all #bioinformatics meetings/dinners including #ismbeccb are "less than formal" that just fits the field.
359322522350661632 Jul 22 10:42 @sjcockell This is quite the introduction #lengthy #KN4 #ismbeccb
359322586166996993 Jul 22 10:42 @larsjuhljensen RT @Chris_Evelo: @jonathancairns two S-bahn stations from where the #ismbeccb dinner is. Which brings uo "do they expect us to wear that already at dinner?"
359322756061470720 Jul 22 10:43 @rtraborn Gary Stormo will now present the keynote. Introducer it telling us that his (many) papers have been cited > 18000 times. Wow. #ismbeccb #kn4
359322779063037952 Jul 22 10:43 @PLOSCompBiol Make sure you drop by the PLOS booth (13) at #ismbeccb to get your t-shirt before they run out! http://t.co/mkeqEYnbGJ
359322839708467201 Jul 22 10:43 @anilthanki @TGACBrowser : Poster is up for viewing #B14 #ISMBECCB come and talk to me for more details http://t.co/7uUpMuwVqC
359322938866016257 Jul 22 10:43 @larsjuhljensen Seems like Gary thinks so too ;-) RT @sjcockell This is quite the introduction #lengthy #KN4 #ismbeccb
359323111172222976 Jul 22 10:44 @yaydinson #ISMBECCB #BIOMAX @ booth 22 extended the BioXM platform for app.in Synthetic Biology @iGEM @iGEM_METU2013
359323114540236800 Jul 22 10:44 @sjcockell Here we go then, Gary Stormo - Searching for signals in genomes #KN4 #ismbeccb
359323348922146816 Jul 22 10:45 @iysik_com I want to see the exhibition partners combat in computing skills in a pit, with live feeds of their screens. #ISMBECCB #ISMB14
359323506737025024 Jul 22 10:46 @arneelof Gary Storm the future ain't what it used to be (last joke of the talk) #ismbeccb
359323661586538496 Jul 22 10:46 @jonathancairns "I took out a load of jokes. You're going to have to use your imagination & predict how funny they would've been"-Gary Stormo #KN4 #ISMBECCB
359323758042955779 Jul 22 10:47 @satagopam GS giving introduction on PSSM (PWM) models #ISMBECCB #KN4
359323769845710848 Jul 22 10:47 @rtraborn Gary Stormo opens talk with quote from 'well-known American philosopher' Yogi Berra: "The future ain't what it used to be". #ismbeccb #KN4
359323867635920896 Jul 22 10:47 @laxvid @genetics_blog Your name came up yesterday night during the bioinfo-core dinner - all in a good way #ISMBECCB
359324099320889344 Jul 22 10:48 @sjcockell PWM assumes positions are independent - luckily it is easy to extend the model #ismbeccb #KN4
359324315587592193 Jul 22 10:49 @SahaSurya Wow! RT @RomainStuder: Gary D. Stormo, cited more than 18,000 times ! http://scholar.google.co.uk/citations?user=MaWAbMcAAAAJ&hl=en&oi=ao #ISMBECCB
359324389268930560 Jul 22 10:49 @iddux Gary Stormo cites Yogi Berra, as the best explanation of Bayes' Law he has encountered. "The future ain't what it used to be" #ISMBECCB
359324413109354496 Jul 22 10:49 @satagopam PWM is a linear model, something relevant to functional activity #ISMBECCB #KN4
359324419774099459 Jul 22 10:49 @arneelof Dinner is at hofbrau at Karl-Liebknecht-Straße 33 10178 Berlin #ismbeccb
359324626662338560 Jul 22 10:50 @Alfons_Valencia Paul Horton very good And informed introduction to Gary Stormo representing this year ISCB's fellows. #ISMBECCB
359324641011466240 Jul 22 10:50 @sciencestream RT @TGACBrowser: Poster is up for viewing #B14 #ISMBECCB come and talk to @anilthanki for more details http://t.co/3Sba9fC4mx
359324641997127680 Jul 22 10:50 @sciencestream RT @sjcockell: Up in the gods for #KN4 *squints at screen* #ismbeccb
359324710242226176 Jul 22 10:51 @yaydinson #ISMBECCB #KN4 A fun talk on what is a PWM and what us not :))
359324754961907712 Jul 22 10:51 @jonathancairns This talk is shaping up to be v interesting & entertaining, expect my tweet rate to decrease as I get sucked in! #ISMBECCB #KN4
359325100035686400 Jul 22 10:52 @Alfons_Valencia Gary Stormo was the editor of CABIOS ( predecessor of BIOINFORMATICS). A journal fundamental for our community in the 80-90's #ISMBECCB
359325173968683008 Jul 22 10:52 @i_am_kilpatrick Ditto! MT @jonathancairns: This talk is shaping up to be v interesting, expect tweet rate to decrease as I get sucked in! #ISMBECCB #KN4
359325196471119872 Jul 22 10:52 @arneelof Check final kn http://scholar.google.co.uk/citations?user=DLXzRi8AAAAJ&hl=en RT @RomainStuder: Gary D. Stormo, cited more than 18,000 times ! http://scholar.google.co.uk/citations?user=MaWAbMcAAAAJ&hl=en&oi=ao #ISMBECCB"
359325288615776257 Jul 22 10:53 @jonathancairns Review, in press: Stormo (2013) Quantitative Biology #ISMBECCB #KN4
359325376209633282 Jul 22 10:53 @arneelof "@Alfons_Valencia: Paul Horton very good And informed introduction to Gary Stormo representing this year ISCB's fellows. #ISMBECCB" agree!
359325397453766656 Jul 22 10:53 @Chris_Evelo GS Information content of PWM determined by how far it defers from random expectation #ismbeccb
359325420476305408 Jul 22 10:53 @rtraborn Stormo is continuing with a v nice introduction of Position Weight Matrices & their initial use for defining promoter motifs. #ismbeccb #KN4
359325562357039104 Jul 22 10:54 @pressbit we just returned a couple of dinner tickets for the #ismbeccb dinner tonight. So if you are interested, stop by the information desk...
359325813226741761 Jul 22 10:55 @larsjuhljensen The sequence logo visualization was what popularized PWMs #ISMBECCB #KN4
359325867153313792 Jul 22 10:55 @frank_foerster RT @pressbit: we just returned a couple of dinner tickets for the #ismbeccb dinner tonight. So if you are interested, stop by the information desk...
359325897473536001 Jul 22 10:55 @Chris_Evelo #KN4 Information content used in logo's height of column related to expected value per base #ISMBECCB
359325996816027648 Jul 22 10:56 @sjcockell RT @larsjuhljensen: The sequence logo visualization was what popularized PWMs #ISMBECCB #KN4
359326014687555584 Jul 22 10:56 @rtraborn Stormo says PWMs didn't get much attention until Schneider developed the Logo representation of Info. Content. #dataviz critical. #ismbeccb
359326045230465025 Jul 22 10:56 @SahaSurya #Viz FTW - Always RT @larsjuhljensen: The sequence logo visualization was what popularized PWMs #ISMBECCB #KN4
359326394100502528 Jul 22 10:57 @sciencestream RT @Alfons_Valencia: Paul Horton very good And informed introduction to Gary Stormo representing this year ISCB's fellows. #ISMBECCB
359326395455266816 Jul 22 10:57 @sciencestream RT @yaydinson: #ISMBECCB #KN4 A fun talk on what is a PWM and what us not :))
359326926378237954 Jul 22 10:59 @iddux Stormo is a giant in the field, back to the basics: binding site predictions by entropy. A refreshing change from "Big Data". #ISMBECCB
359327512574169092 Jul 22 11:02 @simon_andrews That's the second keynote to mention that their most highly cited paper is technically simple but made visualisation of data easy. #ISMBECCB
359327663947001856 Jul 22 11:02 @BioMedCentral RT @GigaScience: Our 1st birthday print issues running out at the @biomedcentral booth, so get them while you can, #ismbeccb http://t.co/VQS6KbSths
359327741331910656 Jul 22 11:03 @GenomeAnalysis RT @anilthanki: @TGACBrowser : Poster is up for viewing #B14 #ISMBECCB come and talk to me for more details http://t.co/7uUpMuwVqC
359327804112273408 Jul 22 11:03 @iddux RT @larsjuhljensen: The sequence logo visualization was what popularized PWMs #ISMBECCB #KN4
359327826534612995 Jul 22 11:03 @Chris_Evelo Sequence power helps to determine binding specificity, you can sequence unbound too and do the math #ismbeccb #kn4
359328294409207809 Jul 22 11:05 @sjcockell Protein binding microarrays - dsDNA, every possible 10mer. Neat. #ismbeccb #KN4
359328313522663424 Jul 22 11:05 @Alfons_Valencia #ISMBECCB
359328608864985088 Jul 22 11:06 @cagdason RT @yaydinson: #ISMBECCB #KN4 A fun talk on what is a PWM and what us not :))
359329098167877633 Jul 22 11:08 @RomainStuder DNA-binding specificity changes in the evolution of forkhead transcription factors. http://www.pnas.org/content/early/2013/07/05/1310430110.abstract #ISMBECCB #KN4
359329102370582528 Jul 22 11:08 @Chris_Evelo Nice thing is that transcription factors seem to like simple models too, forkhead models and such not often needed #kn4 #ismbeccb
359329828320710656 Jul 22 11:11 @Alfons_Valencia Best definition of ISMB by Anna Tramontano: 'ISMB where formulas are not followed by apologies'. Very adequate for Stormo's talk. #ISMBECCB
359330581038899201 Jul 22 11:14 @dagmarwaltemath Yes, I'd like to have that poster! #ismbeccb
359331179155042304 Jul 22 11:16 @cathbrooksbank We chose a good time to be away from the genome campus for #ISMBECCB - aircon and water supply broken back at the ranch.
359331195550568451 Jul 22 11:16 @i_am_kilpatrick ZF data overload! visual equivalent of a Philip Glass piece :) #ISMBECCB #KN4
359331473184129026 Jul 22 11:17 @rtraborn Stormo is showing predicted homeodomain and zinc finger motifs. The mosaic-like logo-sequence figures (200+) are quite mesmerizing #ismbeccb
359331523079966720 Jul 22 11:18 @cathbrooksbank RT @chrisftaylor: EAR = Encourage, Acknowledge and Reward. #firstcatchyouracronym #datasharing #ismbeccb
359331874696867840 Jul 22 11:19 @Alfons_Valencia Gary Stormo goes Now into speculation. I'm Looking forward after a very long day! #ISMBECCB
359332558934245376 Jul 22 11:22 @satagopam PT regulation is more common than transcriptional regulation: translation, splicing,half-life,localisation,editing,frame-shifting #ISMBECCB
359332615343443969 Jul 22 11:22 @cathbrooksbank Big thanks to Michelle Brazas, @PPal23 and @VickySchneiderG for organising a spectacularly good education session at #ISMBECCB today.
359332855819677696 Jul 22 11:23 @EvoMRI RT @iysik_com: I want to see the exhibition partners combat in computing skills in a pit, with live feeds of their screens. #ISMBECCB #ISMB14
359332949281357824 Jul 22 11:23 @i_am_kilpatrick We're still only at the tip of the iceberg re understanding regulation #ISMBECCB #KN4
359333184808288256 Jul 22 11:24 @iddux GS: there is much more to discover in RNA regulatory mechanisms. Riboswitches were only recently discovered! #ISMBECCB
359333273622679552 Jul 22 11:25 @dagmarwaltemath +1 RT @rtraborn Idea: Special-edition t-shift for next year's ISMB // RT @dagmarwaltemath: Yes, I'd like to have that poster! #ismbeccb
359333284313960449 Jul 22 11:25 @Alfons_Valencia Stormo spec: Any protein involved in translation can bind RNA >> therefore they an be involved in regulation. Showing examples. #ISMBECCB
359333322943500288 Jul 22 11:25 @cathbrooksbank @ctitusbrown should we congratulate you, or not really? I will have a beer on your behalf at #ISMBECCB dinner tonight :-)
359333336331726848 Jul 22 11:25 @SahaSurya RT @iddux: GS: there is much more to discover in RNA regulatory mechanisms. Riboswitches were only recently discovered! #ISMBECCB
359333522676264960 Jul 22 11:26 @Chris_Evelo Think protein-DNA interaction is dull, work on protein-RNA interactions. Any protein can interact with RNA #kn4 #ismbeccb
359333618025787392 Jul 22 11:26 @sciencestream RT @sjcockell: Protein binding microarrays - dsDNA, every possible 10mer. Neat. #ismbeccb #KN4
359333621645451264 Jul 22 11:26 @sciencestream RT @dagmarwaltemath: Yes, I'd like to have that poster! #ismbeccb
359333630294130688 Jul 22 11:26 @sciencestream RT @Chris_Evelo: Think protein-DNA interaction is dull, work on protein-RNA interactions. Any protein can interact with RNA #kn4 #ismbeccb
359333780105859072 Jul 22 11:27 @rtraborn Idea: Special Edition t-shirt for next year's ISMB // RT @dagmarwaltemath: Yes, I'd like to have that poster! #ismbeccb
359334145538789377 Jul 22 11:28 @jonathancairns RT @Chris_Evelo: Think protein-DNA interaction is dull, work on protein-RNA interactions. Any protein can interact with RNA #kn4 #ismbeccb
359334903600525314 Jul 22 11:31 @rtraborn Stormo is presenting new challenges in the field. Going through mechanisms of post-transcriptional reg. of gene expression. #ismbeccb #KN4
359335271575207936 Jul 22 11:32 @dagmarwaltemath My colleague Georg Fuellen from Rostock University is organising today's #BoF03 on Ageing Research based on Omics #ismbeccb
359335575163523073 Jul 22 11:34 @Alfons_Valencia Stormo is running late. Good to see an enthusiastic keynote speaker but difficult for the the poor chairperson. #ISMBECCB
359335707648593920 Jul 22 11:34 @SahaSurya RT @Chris_Evelo: Think protein-DNA interaction is dull, work on protein-RNA interactions. Any protein can interact with RNA #kn4 #ismbeccb
359335981159161857 Jul 22 11:35 @frank_foerster #ISMBECCB #KN4 Autoregulation is easy to evolve
359336062520262656 Jul 22 11:36 @Chris_Evelo Stormo mentioned a few times that regulatory proteins can easily evolve self-regulatory RNA interactions. Important field. #ismbeccb #kn4
359336097387511808 Jul 22 11:36 @rtraborn Stormo ran a bit late with his talk. However, he's Gary Stormo so I'm sure most of us didn't mind too much. #Ismbeccb #KN4
359336435423252480 Jul 22 11:37 @fidea_biocomp FIDEA poster is up for viewing @ #G12. Came and speak with us @ #ISMBECCB !
359336579837337600 Jul 22 11:38 @kastacholamine Now I want to build a Lego model of my lab too. #ismbeccb
359336964480180224 Jul 22 11:39 @yaydinson #ISMBECCB #KN4 DNA Legoland. What an inspiration for all. http://instagram.com/p/cEtO-FlBJQ/
359337151067979778 Jul 22 11:40 @rtraborn I'd buy Gary Stormo a Berlinerweiss or two if I could have his ear for ~10 minutes. There's still time! #ismbeccb #KN4
359337269251276800 Jul 22 11:40 @yaydinson RT @kastacholamine: Now I want to build a Lego model of my lab too. #ismbeccb
359337476185276417 Jul 22 11:41 @Chris_Evelo Feels like this talk was too short. Math on slides and complex mechanisms are fine but need time. #kn4 #ismbeccb did that kill twitter feed?
359337602702245888 Jul 22 11:42 @JonathanCFuller #ISMBECCB birds of feather session on #unseminars kicking off in hall 10 shortly. Come and join us!
359337758705197056 Jul 22 11:42 @simon_andrews Best quote of the day "All of our work is done two fingers at a time" #ISMBECCB
359337839495872512 Jul 22 11:43 @riccombeni RT @bffo: #Bioinformatics Bingo: "Big data" @winhide #ISMBECCB
359338055498342400 Jul 22 11:44 @lenovere #ismbeccb "Bioinformatics support fo Molecular Ageing Research based on OMICS data". Doing my duty for the #babraham and #bbsrc :-)
359338130597355520 Jul 22 11:44 @EduEyras RT @Chris_Evelo: Think protein-DNA interaction is dull, work on protein-RNA interactions. Any protein can interact with RNA #kn4 #ismbeccb
359338270703890432 Jul 22 11:44 @frank_foerster RT @JonathanCFuller: #ISMBECCB birds of feather session on #unseminars kicking off in hall 10 shortly. Come and join us!
359338518382145537 Jul 22 11:45 @pjacock RT @simon_andrews: Best quote of the day "All of our work is done two fingers at a time" #ISMBECCB
359338711298752513 Jul 22 11:46 @larsjuhljensen RT @Chris_Evelo: Feels like this talk was too short. Math on slides and complex mechanisms are fine but need time. #kn4 #ismbeccb did that kill twitter feed?
359338849773699073 Jul 22 11:47 @frank_foerster #ismbeccb #bof02 GPU acceleration of bioinformatical pipelines starting soon
359339004690698241 Jul 22 11:47 @JonathanCFuller RT @frank_foerster: #ismbeccb #bof02 GPU acceleration of bioinformatical pipelines starting soon
359339391652986880 Jul 22 11:49 @abeldavidgp RT @Chris_Evelo: Feels like this talk was too short. Math on slides and complex mechanisms are fine but need time. #kn4 #ismbeccb did that kill twitter feed?
359339738425073665 Jul 22 11:50 @AleksiKallio Unconference/unseminar BoF starting up... #ISMBECCB #BoF06
359339805097725953 Jul 22 11:51 @lenovere #ismbeccb Chair of BoF is Georg Fuellen from Rostock Ageing research IBIMA http://www.imib.med.uni-rostock.de/
359339858013073408 Jul 22 11:51 @janosbinder BoF unconferences NOW in hall 10 #ISMBECCB #ismb2013unconf
359339909645344768 Jul 22 11:51 @JonathanCFuller RT @janosbinder: BoF unconferences NOW in hall 10 #ISMBECCB #ismb2013unconf
359340301317439490 Jul 22 11:52 @jonathancairns I'm at the Student Council Careers Session #ISMBECCB
359340527054884864 Jul 22 11:53 @jonathancairns "It used to be the case that once you moved into industry, your academic career was over. That's not really true anymore" #ISMBECCB
359341734071107584 Jul 22 11:58 @VickySchneiderG RT @lenovere: #ismbeccb "Bioinformatics support fo Molecular Ageing Research based on OMICS data". Doing my duty for the #babraham and #bbsrc :-)
359342022873718785 Jul 22 11:59 @jonathancairns On the deluge of genomic data: "You have to try a make a career in this mess. Good luck!" #ISMBECCB
359342025164201984 Jul 22 11:59 @biyoinformatik RT @yaydinson: #ISMBECCB #KN4 DNA Legoland. What an inspiration for all. http://instagram.com/p/cEtO-FlBJQ/
359342949882003456 Jul 22 12:03 @marinkazitnik NVIDIA talk, GPUs for bioinformatics. Not many girls here #ISMBECCB
359343164508733440 Jul 22 12:04 @jonathancairns Apparently industry values PhDs much more than they used to. "Technologically fit, faster career" #ISMBECCB
359343386991403009 Jul 22 12:05 @EvoMRI The Etherpad for the unconference session at #ISMBECCB is up at http://science.okfnpad.org/Unconference-session-at-ISMBECCB-2013
359343421057925120 Jul 22 12:05 @marinkazitnik RT @jonathancairns: Apparently industry values PhDs much more than they used to. "Technologically fit, faster career" #ISMBECCB
359343860893224960 Jul 22 12:07 @LizHoffmanbmc RT @GigaScience: Our 1st birthday print issues running out at the @biomedcentral booth, so get them while you can, #ismbeccb http://t.co/VQS6KbSths
359344771149475840 Jul 22 12:10 @GenomeAnalysis RT @TGACBrowser: Poster is up for viewing #B14 #ISMBECCB come and talk to @anilthanki for more details http://t.co/3Sba9fC4mx
359345071327428608 Jul 22 12:11 @researchobject Today @ #ISMBECCB Workshop: What Bioinformaticians need to know about digital publishing beyond the PDF...
359345504636780544 Jul 22 12:13 @marinkazitnik NVBIO, gpu-based framework for high throughput sequence analysis #ISMBECCB #nvidia
359345507388239873 Jul 22 12:13 @researchobject Tomorrow @ISMBECCB Keynote: Results may vary: what is reproducible? why do open science and who gets the credit? @CaroleAnneGoble #ismbeccb
359345620705746945 Jul 22 12:14 @jonathancairns I present my highly unofficial #ISMBbingo card. Eyes down everyone! Comments welcome. #ISMBECCB http://t.co/CCiAzSXJGI
359345775207518208 Jul 22 12:14 @sciencestream RT @marinkazitnik: NVBIO, gpu-based framework for high throughput sequence analysis #ISMBECCB #nvidia
359345801048653824 Jul 22 12:14 @sciencestream RT @jonathancairns: I present my highly unofficial #ISMBbingo card. Eyes down everyone! Comments welcome. #ISMBECCB http://t.co/CCiAzSXJGI
359346165759741952 Jul 22 12:16 @MAFatIFR RT @TGACBrowser: Poster is up for viewing #B14 #ISMBECCB come and talk to @anilthanki for more details http://t.co/3Sba9fC4mx
359346380533686272 Jul 22 12:17 @openscience RT @iddux: Bourne: NIH are starting to enforce PMC publications within a year. No PMC ID - no $$$. Same will go for data. #ISMBECCB
359346665683042308 Jul 22 12:18 @fsayre RT @iddux: Bourne: NIH are starting to enforce PMC publications within a year. No PMC ID - no $$$. Same will go for data. #ISMBECCB
359346701259120642 Jul 22 12:18 @librarianThea RT @iddux: Bourne: NIH are starting to enforce PMC publications within a year. No PMC ID - no $$$. Same will go for data. #ISMBECCB
359346757978701824 Jul 22 12:18 @krafty RT @iddux: Bourne: NIH are starting to enforce PMC publications within a year. No PMC ID - no $$$. Same will go for data. #ISMBECCB
359346815692320768 Jul 22 12:18 @i_am_kilpatrick Haha, excellent! :) MT @jonathancairns I present my highly unofficial #ISMBbingo card. Eyes down everyone! #ISMBECCB http://t.co/Q6lVylgeJq
359346935175446528 Jul 22 12:19 @jonathancairns With thanks to @i_am_kilpatrick and @iysik_com for inspiration & suggestions - #ISMBbingo #ISMBECCB http://t.co/CCiAzSXJGI
359347096769400832 Jul 22 12:19 @DrStelling RT @iddux: Bourne: NIH are starting to enforce PMC publications within a year. No PMC ID - no $$$. Same will go for data. #ISMBECCB
359347163165241345 Jul 22 12:20 @jonathancairns Key career advice: "Don't get angry! Never get angry!" (esp during grant proposals) #ISMBECCB
359347657426628608 Jul 22 12:22 @erikfyhom RT @iddux: Bourne: NIH are starting to enforce PMC publications within a year. No PMC ID - no $$$. Same will go for data. #ISMBECCB
359347872975695874 Jul 22 12:23 @LSHTMlibrary RT @iddux: Bourne: NIH are starting to enforce PMC publications within a year. No PMC ID - no $$$. Same will go for data. #ISMBECCB
359347982313226240 Jul 22 12:23 @MonogramUK RT @TGACBrowser: Poster is up for viewing #B14 #ISMBECCB come and talk to @anilthanki for more details http://t.co/3Sba9fC4mx
359348158989881344 Jul 22 12:24 @heathermvincent Great to catch up with so many UoM distance students http://octette.cs.man.ac.uk/bioinformatics/index.html at #ISMBECCB First 3 posters down today, but A008 up now!
359348906682875905 Jul 22 12:27 @rohitfarmer Its time for conference banquet dinner #ISMBECCB
359349078305800192 Jul 22 12:27 @shlakeuva RT @iddux: Bourne: NIH are starting to enforce PMC publications within a year. No PMC ID - no $$$. Same will go for data. #ISMBECCB
359349645107277824 Jul 22 12:30 @fremus RT @jonathancairns: I present my highly unofficial #ISMBbingo card. Eyes down everyone! Comments welcome. #ISMBECCB http://t.co/CCiAzSXJGI
359349734709792770 Jul 22 12:30 @MSKCC_Library RT @iddux: Bourne: NIH are starting to enforce PMC publications within a year. No PMC ID - no $$$. Same will go for data. #ISMBECCB
359350196968235008 Jul 22 12:32 @talyarkoni Hooray! RT @iddux: Bourne: NIH are starting to enforce PMC publications within a year. No PMC ID - no $$$. Same will go for data. #ISMBECCB
359350871500804096 Jul 22 12:34 @turlerinkokeni RT @yaydinson: #ISMBECCB #KN4 DNA Legoland. What an inspiration for all. http://instagram.com/p/cEtO-FlBJQ/
359351091118739456 Jul 22 12:35 @studentdd RT @jonathancairns: With thanks to @i_am_kilpatrick and @iysik_com for inspiration & suggestions - #ISMBbingo #ISMBECCB http://t.co/CCiAzSXJGI
359351136005795840 Jul 22 12:36 @jonathancairns Discussing how useful online presence is for career. Some pro, some anti. ...Err anybody got a good postdoc position available? #ISMBECCB
359351485840109570 Jul 22 12:37 @iddux RT @jonathancairns: I present my highly unofficial #ISMBbingo card. #ISMBECCB http://t.co/zV5kGnMezS <- AWESOMESAUCE!
359351523018817536 Jul 22 12:37 @sciencestream RT @jonathancairns: With thanks to @i_am_kilpatrick and @iysik_com for inspiration & suggestions - #ISMBbingo #ISMBECCB http://t.co/CCiAzSXJGI
359351530807652352 Jul 22 12:37 @sciencestream RT @jonathancairns: Key career advice: "Don't get angry! Never get angry!" (esp during grant proposals) #ISMBECCB
359351539431120896 Jul 22 12:37 @sciencestream RT @heathermvincent: Great to catch up with so many UoM distance students http://octette.cs.man.ac.uk/bioinformatics/index.html at #ISMBECCB First 3 posters down today, but A008 up now!
359351544065843200 Jul 22 12:37 @sciencestream RT @rohitfarmer: Its time for conference banquet dinner #ISMBECCB
359352159793459200 Jul 22 12:40 @memotypic RT @iddux: RT @jonathancairns: I present my highly unofficial #ISMBbingo card. #ISMBECCB http://t.co/zV5kGnMezS <- AWESOMESAUCE!
359352160003174400 Jul 22 12:40 @chrisftaylor RT @iddux: RT @jonathancairns: I present my highly unofficial #ISMBbingo card. #ISMBECCB http://t.co/zV5kGnMezS <- AWESOMESAUCE!
359352652611989504 Jul 22 12:42 @frank_foerster RT @rohitfarmer: Its time for conference banquet dinner #ISMBECCB
359353160433147904 Jul 22 12:44 @torstenseemann RT @jonathancairns: With thanks to @i_am_kilpatrick and @iysik_com for inspiration & suggestions - #ISMBbingo #ISMBECCB http://t.co/CCiAzSXJGI
359353231085797376 Jul 22 12:44 @genetics_blog #ISMBECCB RT @RayanChikhi: Our article won best paper award at HiTSeq2013. http://arxiv.org/abs/1304.5665 Slides of the talk: http://perso.eleves.bretagne.ens-cachan.fr/~chikhi/2013-july-20-hitseq.pdf
359353352280621056 Jul 22 12:44 @DNADigest RT @jonathancairns: I present my highly unofficial #ISMBbingo card. Eyes down everyone! Comments welcome. #ISMBECCB http://t.co/CCiAzSXJGI
359353358999900160 Jul 22 12:44 @genetics_blog Re Prev tweet: Informed and Automated k-Mer Size Selection for Genome Assembly http://arxiv.org/abs/1304.5665 #bioinformatics #ISMBECCB
359353709244858368 Jul 22 12:46 @WonderMixTape RT @jonathancairns: I present my highly unofficial #ISMBbingo card. Eyes down everyone! Comments welcome. #ISMBECCB http://t.co/CCiAzSXJGI
359355140676923396 Jul 22 12:51 @dualnoise RT @jonathancairns: Apparently industry values PhDs much more than they used to. "Technologically fit, faster career" #ISMBECCB
359355200248627203 Jul 22 12:52 @sau916 RT @genetics_blog: #ISMBECCB RT @RayanChikhi: Our article won best paper award at HiTSeq2013. http://arxiv.org/abs/1304.5665 Slides of the talk: http://t.co/QAbdB8wJWH
359355364757610498 Jul 22 12:52 @genetics_blog #ISMBECCB #KN3 folks: did pachter talk about appropriate methods for differential isoform expression analysis with eXpress counts/FPKMs?
359356495110348800 Jul 22 12:57 @leilaluheshi RT @jonathancairns: I present my highly unofficial #ISMBbingo card. Eyes down everyone! Comments welcome. #ISMBECCB http://t.co/CCiAzSXJGI
359358399823478784 Jul 22 13:04 @nopiedra RT @RomainStuder: Gary D. Stormo, cited more than 18,000 times ! http://scholar.google.co.uk/citations?user=MaWAbMcAAAAJ&hl=en&oi=ao #ISMBECCB
359358798613733376 Jul 22 13:06 @nopiedra RT @larsjuhljensen: My presentation "Networks of proteins and diseases" is now on SlideShare http://www.slideshare.net/larsjuhljensen/networks-of-proteins-and-diseases-24470208 #ISMBECCB #SS02
359360136747302912 Jul 22 13:11 @coughls RT @iddux: GS: there is much more to discover in RNA regulatory mechanisms. Riboswitches were only recently discovered! #ISMBECCB
359360950526148608 Jul 22 13:15 @Research4SML @asist_org: #ISMBECCB is now trending on http://AcademiaMap.com
359362249476947969 Jul 22 13:20 @PLOS RT @PLOSCompBiol: Make sure you drop by the PLOS booth (13) at #ismbeccb to get your t-shirt before they run out! http://t.co/mkeqEYnbGJ
359362625890557952 Jul 22 13:21 @writeonscience RT @PLOSCompBiol: Make sure you drop by the PLOS booth (13) at #ismbeccb to get your t-shirt before they run out! http://t.co/mkeqEYnbGJ
359362790219186177 Jul 22 13:22 @coughls RT @jonathancairns: With thanks to @i_am_kilpatrick and @iysik_com for inspiration & suggestions - #ISMBbingo #ISMBECCB http://t.co/CCiAzSXJGI
359363221649502208 Jul 22 13:24 @kaskadia RT @PLOSCompBiol: Make sure you drop by the PLOS booth (13) at #ismbeccb to get your t-shirt before they run out! http://t.co/mkeqEYnbGJ
359365183686180864 Jul 22 13:31 @OmicsOmicsBlog RT @SahaSurya: +1 RT @winhide: @Rbaltman #ISMBECCB Teach bioinfo to MDs/scientists to combine omics/med, refuse statisticians who refuse to learn bio
359367297607401472 Jul 22 13:40 @amrojasmendoza RT @iddux: RT @jonathancairns: I present my highly unofficial #ISMBbingo card. #ISMBECCB http://t.co/zV5kGnMezS <- AWESOMESAUCE!
359367645407506432 Jul 22 13:41 @sciencestream RT @Research4SML: @asist_org: #ISMBECCB is now trending on http://AcademiaMap.com
359367645755228160 Jul 22 13:41 @mattjhodgkinson RT @iddux: @PLOSONE published > 3k paper last month! #ISMBECCB #openaccess
359367727225774080 Jul 22 13:41 @amrojasmendoza RT @Chris_Evelo: Think protein-DNA interaction is dull, work on protein-RNA interactions. Any protein can interact with RNA #kn4 #ismbeccb
359367804048248832 Jul 22 13:42 @julponchart RT @BioMickWatson: Classic mistake - 16s isn't metagenomics #taverna #ISMBECCB
359370025376833537 Jul 22 13:51 @cathbrooksbank @Slmorg borrowing @JenniferCham's most precious possession at the #ISMBECCB booze up. http://t.co/InDZ2whMe4
359370402285776896 Jul 22 13:52 @amrojasmendoza RT @Alfons_Valencia: Bioinformatics (the journal) associate editors meeting at #ISMBECCB. Thanks to our authors, referees & editors the journal is flying high.
359372452964868096 Jul 22 14:00 @sciencestream RT @cathbrooksbank: @Slmorg borrowing @JenniferCham's most precious possession at the #ISMBECCB booze up. http://t.co/InDZ2whMe4
359374667951255552 Jul 22 14:09 @John_B_Cole RT @iddux: Bourne: NIH are starting to enforce PMC publications within a year. No PMC ID - no $$$. Same will go for data. #ISMBECCB
359376126713405441 Jul 22 14:15 @BeckThurlow2 Another free t shirt, some sweets, pens, and a mouse pad. Good haul. #ISMBECCB
359378910607187969 Jul 22 14:26 @peccoud The A-Myth: running your lab as a business http://shar.es/kcjmW via @figshare #ISMB #ISMBECCB
359380863202496514 Jul 22 14:34 @cathbrooksbank Rinus is contemplating his dinner #ISMBECCB http://t.co/kKoQxYZm4H
359380914704355330 Jul 22 14:34 @Chris_Evelo The good thing about conference dinners with low ceilings and live music is you can say whatever you want. Nobody will understand #ismbeccb
359381058288353280 Jul 22 14:34 @sciencestream RT @BeckThurlow2: Another free t shirt, some sweets, pens, and a mouse pad. Good haul. #ISMBECCB
359381064944324608 Jul 22 14:34 @sciencestream RT @peccoud: The A-Myth: running your lab as a business http://shar.es/kcjmW via @figshare #ISMB #ISMBECCB
359381068765749248 Jul 22 14:34 @sciencestream RT @cathbrooksbank: Rinus is contemplating his dinner #ISMBECCB http://t.co/kKoQxYZm4H
359382453896478720 Jul 22 14:40 @cathbrooksbank And yet more food shenanigans with @emblebi's training team and @ELIXIREurope - #ISMBECCB
359382864804057089 Jul 22 14:42 @Chris_Evelo Same food with beer #ismbeccb (don't try this at home) http://t.co/cO9OUvM2BU
359385620491554816 Jul 22 14:53 @sciencestream RT @cathbrooksbank: And yet more food shenanigans with @emblebi's training team and @ELIXIREurope - #ISMBECCB
359385631245762560 Jul 22 14:53 @sciencestream RT @Chris_Evelo: Same food with beer #ismbeccb (don't try this at home) http://t.co/cO9OUvM2BU
359389068939247616 Jul 22 15:06 @Janis3_14159 RT @jonathancairns: I present my highly unofficial #ISMBbingo card. Eyes down everyone! Comments welcome. #ISMBECCB http://t.co/CCiAzSXJGI
359389429271908352 Jul 22 15:08 @Janis3_14159 RT @jonathancairns: On the deluge of genomic data: "You have to try a make a career in this mess. Good luck!" #ISMBECCB
359390543823912960 Jul 22 15:12 @cathbrooksbank Do I work with these people? Big beers and seriously prehistoric food at the #ISMBECCB party... http://t.co/GBZzxEm1QX
359390832274579456 Jul 22 15:13 @sciencestream RT @cathbrooksbank: Do I work with these people? Big beers and seriously prehistoric food at the #ISMBECCB party... http://t.co/GBZzxEm1QX
359398115326951426 Jul 22 15:42 @uiDoveDesign Another free t shirt, some sweets, pens, and a mouse pad. Good haul. #ISMBECCB
359403121295884289 Jul 22 16:02 @srihari176 RT @jonathancairns: With thanks to @i_am_kilpatrick and @iysik_com for inspiration & suggestions - #ISMBbingo #ISMBECCB http://t.co/CCiAzSXJGI
359420831882940416 Jul 22 17:12 @siandart RT @iddux: Bourne: NIH are starting to enforce PMC publications within a year. No PMC ID - no $$$. Same will go for data. #ISMBECCB
359421373967781888 Jul 22 17:15 @force11rescomm RT @gigascience: Phil Bourne on how to get involved: join Force11 http://www.force11.org/ #BtPDF2 #WK3 #ISMBECCB
359422139222724608 Jul 22 17:18 @sciencestream RT @force11rescomm: RT @gigascience: Phil Bourne on how to get involved: join Force11 http://www.force11.org/ #BtPDF2 #WK3 #ISMBECCB
359425780428046336 Jul 22 17:32 @dagmarwaltemath RT @Chris_Evelo: Same food with beer #ismbeccb (don't try this at home) http://t.co/cO9OUvM2BU
359425922908160000 Jul 22 17:33 @Paula_deMatos Hope UX takes those bioinformaticians by storm tomorrow with @JenniferCham talk http://www.iscb.org/cms_addon/conferences/ismbeccb2013/highlights.php#other #ISMBECCB cc/ @annadivoli
359427285633339393 Jul 22 17:38 @bioontology RT @dagmarwaltemath: NCBO and EBI now have SPARQL endpoints to some data. James Malone #ismbeccb
359427613661872128 Jul 22 17:39 @sciencestream RT @Paula_deMatos: Hope UX takes those bioinformaticians by storm tomorrow with @JenniferCham talk http://www.iscb.org/cms_addon/conferences/ismbeccb2013/highlights.php#other #ISMBECCB cc/ @annadivoli
359427712202452993 Jul 22 17:40 @andreshouse RT @GigaScience: Phil Bourne on what needs fixing in the research cycle #wk3 #ismbeccb http://t.co/eO3PiaaA0P
359431188307791872 Jul 22 17:54 @tehancocks RT @Paula_deMatos: Hope UX takes those bioinformaticians by storm tomorrow with @JenniferCham talk http://www.iscb.org/cms_addon/conferences/ismbeccb2013/highlights.php#other #ISMBECCB cc/ @annadivoli
359432273445126144 Jul 22 17:58 @benvilleneuve8 Another free t shirt, some sweets, pens, and a mouse pad. Good haul. #ISMBECCB
359432577989758976 Jul 22 17:59 @MMMarksman RT @iddux: @F1000Research uses post-publication peer-review. Open refereeing. Data inclusion. No access restriction. #ISMBECCB
359433901074157568 Jul 22 18:04 @jonathancairns Thank you very much to the people I had dinner with for being so hospitable. (You know who you are.) Night all! #ISMBECCB
359440612317491200 Jul 22 18:31 @figshare RT @peccoud: The A-Myth: running your lab as a business http://shar.es/kcjmW via @figshare #ISMB #ISMBECCB
359441998719098882 Jul 22 18:37 @mrhunsaker RT @peccoud: The A-Myth: running your lab as a business http://shar.es/kcjmW via @figshare #ISMB #ISMBECCB
359442552010715138 Jul 22 18:39 @LlewellynCox RT @peccoud: The A-Myth: running your lab as a business http://shar.es/kcjmW via @figshare #ISMB #ISMBECCB
359442552035868672 Jul 22 18:39 @Research2_0 RT @peccoud: The A-Myth: running your lab as a business http://shar.es/kcjmW via @figshare #ISMB #ISMBECCB
359455811472338944 Jul 22 19:31 @annadivoli RT @Paula_deMatos: Hope UX takes those bioinformaticians by storm tomorrow with @JenniferCham talk http://www.iscb.org/cms_addon/conferences/ismbeccb2013/highlights.php#other #ISMBECCB cc/ @annadivoli
359460536171237376 Jul 22 19:50 @BUbioinfo RT @cathbrooksbank: @BUbioinfo so far it's a toss-up between the beyond the PDF session this morning and WEB this afternoon #ISMBECCB
359460619860193282 Jul 22 19:51 @BUbioinfo @cathbrooksbank Both amazing! #ISMBECCB
359461658927710208 Jul 22 19:55 @sciencestream RT @BUbioinfo: @cathbrooksbank Both amazing! #ISMBECCB
359470118708842496 Jul 22 20:28 @abhik1368 RT @dagmarwaltemath: NCBO and EBI now have SPARQL endpoints to some data. James Malone #ismbeccb
359472440847511553 Jul 22 20:38 @paulfuhlir RT @iddux: Bourne: NIH are starting to enforce PMC publications within a year. No PMC ID - no $$$. Same will go for data. #ISMBECCB
359473549485932544 Jul 22 20:42 @AliciaOshlack RT @sjcockell: Data is not understanding. Tools are not analysis. Wise words #ismbeccb #KN2
359474229479096320 Jul 22 20:45 @ovation_io RT @iddux: Bourne: NIH are starting to enforce PMC publications within a year. No PMC ID - no $$$. Same will go for data. #ISMBECCB
359490694550790146 Jul 22 21:50 @CSIROnews Art meets science. Stunning bioscience images from us & others: http://ow.ly/ndEVc #ISMBECCB ^JH
359492073960898560 Jul 22 21:56 @echidna_paw RT @CSIROnews: Art meets science. Stunning bioscience images from us & others: http://ow.ly/ndEVc #ISMBECCB ^JH
359492193032994816 Jul 22 21:56 @sciencestream RT @CSIROnews: Art meets science. Stunning bioscience images from us & others: http://ow.ly/ndEVc #ISMBECCB ^JH
359496415770181632 Jul 22 22:13 @NYSFoz RT @CSIROnews: Art meets science. Stunning bioscience images from us & others: http://ow.ly/ndEVc #ISMBECCB ^JH
359525564278779905 Jul 23 00:09 @BioFlorida RT @CSIROnews: Art meets science. Stunning bioscience images from us & others: http://ow.ly/ndEVc #ISMBECCB ^JH
359556379704434691 Jul 23 02:11 @galaxyproject RT @kiwi_k1: RT: Bioinformatics job vacancy at Rothamsted Research, UK. Closing date 4th August. http://www.rothamsted.ac.uk/Content-Section=Careers&Page=Vacancies.html#1272 #ismbeccb #usegalaxy
359559919013335040 Jul 23 02:25 @pendragon58_ Another free t shirt, some sweets, pens, and a mouse pad. Good haul. #ISMBECCB
359560509311287296 Jul 23 02:28 @jmchilton @galaxyproject The official conference hash tag is #ISMBECCB.
359562171203588097 Jul 23 02:34 @sciencestream RT @jmchilton: @galaxyproject The official conference hash tag is #ISMBECCB.
359562254523449344 Jul 23 02:34 @jmchilton GenomeSpace talk yesterday (poster B26 today). It'd useful to @umnmsi if it could be installed locally (without a cloud provider). #ISMBECCB
359564867428024320 Jul 23 02:45 @JenniferCham RT @Paula_deMatos: Hope UX takes those bioinformaticians by storm tomorrow with @JenniferCham talk http://www.iscb.org/cms_addon/conferences/ismbeccb2013/highlights.php#other #ISMBECCB cc/ @annadivoli
359565126405332992 Jul 23 02:46 @JenniferCham FYI #ISMBECCB my talk is at 12.00 in Hall 7
359565428495880193 Jul 23 02:47 @larsjuhljensen Omg Omg Omg #RoyalBaby #itsaboy - and with that out of the way: looking forward to Carole Goble's talk #ISMBECCB #KN5
359566033004134404 Jul 23 02:49 @lenovere #ismbeccb Keynote this morning is Carole Goble from Manchester. On open and reproducible science. http://www.manchester.ac.uk/research/Carole.goble
359568363137146880 Jul 23 02:59 @AidanBudd Thanks 2 the #ismb2013unconf #ISMBECCB BoF yesterday was fun! Add any follow-up thoughts here http://science.okfnpad.org/Unconference-session-at-ISMBECCB-2013? thanks @EvoMRI 4 that!
359568390928601088 Jul 23 02:59 @sciencestream RT @larsjuhljensen: Omg Omg Omg #RoyalBaby #itsaboy - and with that out of the way: looking forward to Carole Goble's talk #ISMBECCB #KN5
359568407793905665 Jul 23 02:59 @GigaScience .@Alexbateman1 giving an update on the ISCB wikipedia competition. We wrote a blog when this launched http://blogs.biomedcentral.com/gigablog/2012/07/25/1-2-3-4-get-with-the-wiki/ #ISMBECCB
359568414932615170 Jul 23 02:59 @sciencestream RT @lenovere: #ismbeccb Keynote this morning is Carole Goble from Manchester. On open and reproducible science. http://www.manchester.ac.uk/research/Carole.goble
359614496181989376 Jul 23 06:02 @yaydinson RT @iddux: Recommended 11:30 talk Predrag Radivojac's on Critical Assessment of Function Annotations, Lounge 81 11:30 Next to #ISMBECCB registration
359614502049816578 Jul 23 06:02 @arneelof RT @cathbrooksbank: 40% of @galaxyproject's budget goes on outreach - food for thought! #ISMBnetworking #ISMBECCB
359614574179262468 Jul 23 06:02 @GigaScience .@bffo "beer is an important thing for networking". I'll drink to that! #WK6 #ISMBECCB #networkingdrinkinggame
359614790638903297 Jul 23 06:03 @WonderMixTape "Health care is becoming for 1st time in USA patient centric" - @pebourne #ISMBECCB #SS05
359614857890373636 Jul 23 06:03 @jonathancairns We're looking at translation, and how it is affected by codon usage, mRNA conformation, etc #LBR20 #ISMBECCB
359614972524900353 Jul 23 06:04 @arneelof Putative and novel transcript were found by large scale proteomics #ismbeccb
359615021036220416 Jul 23 06:04 @yaydinson RT @BioMickWatson: Puppies are cute, so we care; software isn't, so we don't. Solution: make software cute #ISMBECCB
359615045694529536 Jul 23 06:04 @jmchilton "Beer is important for networking." @bffo. Seems to be the unofficial motto of the #usegalaxy community conference as well. #ISMBECCB
359615186325356544 Jul 23 06:05 @yaydinson "@BioMickWatson: Puppies are cute, so we care; software isn't, so we don't. Solution: make software cute #ISMBECCB" @METUSNP @GENformatik
359615292923592704 Jul 23 06:05 @arneelof Also evidence for nmd transcripts chimeric abs pseudo genes with few peptides #ismbeccb
359615400071282690 Jul 23 06:06 @mgmuller RT @GenaliceDNA: Excellent performance data GENALICE MAP presented at HiTSeq 2013 meeting in Berlin: http://bit.ly/1aXEDHw #ismbeccb #bioinformatics #ngs
359615455935209474 Jul 23 06:06 @tehancocks Bioinfo resources suffer from usability problems @jennifercham they are ugly and difficult to use, unlike public websites #ISMBECCB
359615488730464257 Jul 23 06:06 @jonathancairns "Beer is important for networking." - @bffo Sounds to me like there are two redundant words at the end of that sentence. #ISMBECCB
359615685170708480 Jul 23 06:07 @GenomeAnalysis Sergey ready to present multi-dimensional de Bruijn graph assembler with a visual presentation! Lunch time at #ISMBECCB poster no. N54
359615689004290049 Jul 23 06:07 @lesleyhenders RT @GigaScience: First talk (probably ever) at #ISMBECCB saying we need need to read the social science literature more #KN5
359615701385875456 Jul 23 06:07 @animalplantsci GigaBirthday at #ISMBECCB - GigaBlog http://blogs.biomedcentral.com/gigablog/2013/07/19/gigabirthday-at-ismb/ - Happy birthday @GigaScience!
359615761393782784 Jul 23 06:07 @arneelof Looking for peptides that can distinguish splice forms. Showed one example (small indel in disorder) #ismbeccb
359615955669757953 Jul 23 06:08 @frank_foerster #ISMBECCB #PP68 Combinatorial pooling enables selective sequencing of the barley gene space
359615970475638785 Jul 23 06:08 @arneelof earlier studies indicated that we shouldn't expect more than a few hundred. Found 150 #ismbeccb
359616011101675521 Jul 23 06:08 @tehancocks .@jennifercham the @emblebi doesn't sell stuff, difficult to measure UCD metrics as no increase in sales/profits #ISMBECCB
359616093729464321 Jul 23 06:08 @marc_rr RT @cathbrooksbank: What makes iscb regional student groups successful? @michautbioinfo's slide at #ISMBnetworking #ISMBECCB http://t.co/4xw2WWj5DG
359616353965064193 Jul 23 06:09 @iddux If you want to learn more about CAFA, come to poster L004. We will be there. #ISMBECCB
359616489030025216 Jul 23 06:10 @cathbrooksbank @aleksandrana stresses the importance of taking grass roots ideas into account, not being too top-down #ISMBnetworking #ISMBECCB
359616529773494273 Jul 23 06:10 @marc_rr The moment when, after scrolling down several pages of #ISMBECCB tweets, I realize I've only checked the last 23 mins. #Igiveup
359616570617626625 Jul 23 06:10 @xanderpico @michautbioinfo: Organized and ambitious activities by @iscbsc Student Council. Need paths to jr/sr ISCB leaderships roles. #ismbeccb
359616607854657536 Jul 23 06:10 @iddux RT @marc_rr: The moment when, after scrolling down several pages of #ISMBECCB tweets, I realize I've only checked the last 23 mins. #Igiveup
359616609519796225 Jul 23 06:10 @WonderMixTape RT @marc_rr: The moment when, after scrolling down several pages of #ISMBECCB tweets, I realize I've only checked the last 23 mins. #Igiveup
359616625244246017 Jul 23 06:10 @arneelof Why only 1.2% of the 12000 genes annotated as splicing. Over represented hbRNP HE exons (tropomyosin) #ismbeccb
359616850138640384 Jul 23 06:11 @cathbrooksbank @NBlomberg: network members need to know what the benefits for them are #ISMBnetworking #ISMBECCB
359617050177581057 Jul 23 06:12 @torstenseemann It seems Americans are exempt from putting their country name on their title slides, even if in Berlin... #ISMBECCB
359617091122376704 Jul 23 06:12 @reactome Come visit the Reactome Knowledgebase: Annotating Cancer Variants and Anti-Cancer Therapeutics poster A078 Central Lobby #ISMBECCB
359617125423390720 Jul 23 06:12 @arneelof "@xanderpico: @michautbioinfo: @iscbsc Student Council. Need paths to jr/sr ISCB leaderships roles. #ismbeccb" Easy: publish good papers.
359617191328481280 Jul 23 06:13 @cathbrooksbank @bffo: getting members to support each other has been an important part of @galaxyproject's success #ISMBnetworking #ISMBECCB
359617296718774273 Jul 23 06:13 @sjcockell @JenniferCham almost certainly not - getting Twitter to report non-personalised trends is hard #ismbeccb
359617573257609219 Jul 23 06:14 @sciencestream RT @AidanBudd: #ISMBECCB #ismbnetworking @michautbioinfo clear transparent defined structure to network facilitates communication and expectations
359617581621051392 Jul 23 06:14 @sciencestream RT @WonderMixTape: Positions available in Computational biology at @GSK: Contact phillppe.x.sanseau {at} http://gsk.com #ISMBECCB #SS05
359617671504990208 Jul 23 06:15 @METUSNP @Chris_Evelo for more than "decent" try BlockHouse. That is a great steakhouse with good beer and afforable prices #ISMBECCB
359617777801244675 Jul 23 06:15 @cathbrooksbank @NBlomberg: put time in up front agreeing what you want to achieve and what's realistic to manage expectations #ISMBnetworking #ISMBECCB
359617977500434432 Jul 23 06:16 @arneelof High enrichment in homologous exons s and to lesser extent nagnag exons in verified splice forms #ismbeccb
359618111403589633 Jul 23 06:16 @GigaScience RT @iddux: If you want to learn more about CAFA, come to poster L004. We will be there. #ISMBECCB
359618141120237568 Jul 23 06:17 @yannabraham RT @sjcockell: Repeat, replicate, reproduce, reuse. 4 levels of reproducibility. #ismbeccb #KN5
359618528241926144 Jul 23 06:18 @cathbrooksbank Before setting up a network think through whether you're prepared to lead it and whether there's a need #ISMBnetworking #ISMBECCB
359618605446475776 Jul 23 06:18 @karinv @alagraphy Your photographs in the art science show are absolutely gorgeous. Good luck!! Do we vote somewhere? #ismbeccb
359618608084692993 Jul 23 06:18 @yannabraham RT @sjcockell: Mertonian Norms: http://en.wikipedia.org/wiki/Mertonian_norms #ismbeccb #KN5
359618641769152512 Jul 23 06:19 @yaydinson "@arneelof: High enrichment in homologous exons s and to lesser extent nagnag exons in verified splice forms #ismbeccb" #PP71
359618705564508162 Jul 23 06:19 @jonathancairns After you've (and I've) eaten, come see me at poster F56 where I'm "Coupling read-based ChIP-seq analysis with expression data..." #ISMBECCB
359618749759889408 Jul 23 06:19 @studentdd Vote for your favorite of #ISMBECCB Art&Science Exhibition http://bit.ly/18A9LMk
359618853518577665 Jul 23 06:19 @jmchilton Woot! @usegalaxyp shout out during this workshop. #ISMBECCB
359618957071753216 Jul 23 06:20 @WonderMixTape RT @studentdd: Vote for your favorite of #ISMBECCB Art&Science Exhibition http://bit.ly/18A9LMk
359618971613396993 Jul 23 06:20 @jonathancairns ...if for no other reason, you'll get to cross off the ENCODE square on the #ISMBbingo card :) http://t.co/CCiAzSXJGI #ISMBECCB
359619122922913792 Jul 23 06:20 @tehancocks Example of UCD by @JenniferCham on development of Enzyme Portal @emblebi @PDBeurope #ISMBECCB
359619135476473857 Jul 23 06:20 @sjcockell @jonathancairns I’m pretty sure we’ve all crossed that one off about 25 times already ;) #ismbeccb
359619179051106306 Jul 23 06:21 @nickschurch RT @simon_andrews: Cheeriest ending to a keynote. Software is like a puppy. It costs a lot, gets sick and dies. #ISMBECCB
359619250865971201 Jul 23 06:21 @WonderMixTape RT @simon_andrews: Cheeriest ending to a keynote. Software is like a puppy. It costs a lot, gets sick and dies. #ISMBECCB
359619619004231680 Jul 23 06:22 @sciencestream RT @METUSNP: @Chris_Evelo for more than "decent" try BlockHouse. That is a great steakhouse with good beer and afforable prices #ISMBECCB
359619619918577665 Jul 23 06:22 @cathbrooksbank Resourcing networks - have to remember the cost of people's time - @NBlomberg at #ismbnetworking #ISMBECCB
359619649119326208 Jul 23 06:23 @sciencestream RT @arneelof: High enrichment in homologous exons s and to lesser extent nagnag exons in verified splice forms #ismbeccb
359619696628203520 Jul 23 06:23 @sciencestream RT @karinv: @alagraphy Your photographs in the art science show are absolutely gorgeous. Good luck!! Do we vote somewhere? #ismbeccb
359619744829153281 Jul 23 06:23 @cdparra RT @GigaScience: .@bffo "beer is an important thing for networking". I'll drink to that! #WK6 #ISMBECCB #networkingdrinkinggame
359619757638561793 Jul 23 06:23 @sciencestream RT @studentdd: Vote for your favorite of #ISMBECCB Art&Science Exhibition http://bit.ly/18A9LMk
359619770053705729 Jul 23 06:23 @sciencestream RT @jmchilton: Woot! @usegalaxyp shout out during this workshop. #ISMBECCB
359619822977433600 Jul 23 06:23 @sciencestream RT @tehancocks: Example of UCD by @JenniferCham on development of Enzyme Portal @emblebi @PDBeurope #ISMBECCB
359619838664130560 Jul 23 06:23 @sciencestream RT @sjcockell: @jonathancairns I’m pretty sure we’ve all crossed that one off about 25 times already ;) #ismbeccb
359620124128460801 Jul 23 06:24 @rtraborn Here's what my poster #G30 is about: TSSs are distributed at the promoter, but transcription initiation patterns are complex. 1/2 #ismbeccb
359620169720545280 Jul 23 06:25 @xanderpico [corrected @] "Inversely related skills: software dev and user empathy" Simon Baron-Cohen (cousin of Ali G!) @JenniferCham #ismbeccb
359620205166608384 Jul 23 06:25 @WonderMixTape Observation from big pharma: if someone has idea from generic, they won't touch it. #ISMBECCB #SS05 Generic=90% of drugs
359620371332341761 Jul 23 06:25 @VickySchneiderG RT @GenomeAnalysis: Sergey ready to present multi-dimensional de Bruijn graph assembler with a visual presentation! Lunch time at #ISMBECCB poster no. N54
359620659514572800 Jul 23 06:27 @VickySchneiderG RT @AidanBudd: #ISMBECCB #ismbnetworking @michautbioinfo give (maybe push?) people into responsibility, and they surprise you well by growing into it
359620846278545410 Jul 23 06:27 @BilkentCompGen RT @BioMickWatson: Puppies are cute, so we care; software isn't, so we don't. Solution: make software cute #ISMBECCB
359621085379035136 Jul 23 06:28 @bffo yes, very much! RT @cathbrooksbank: @bffo but much good stuff emerging from the chaos, no? #ISMBnetworking #ISMBECCB
359621151703576577 Jul 23 06:28 @WonderMixTape Q:How many successes do we expect in next 10-15 year? A: 27 #RandomNumberGeneration #ISMBECCB #SS05
359621167369297920 Jul 23 06:29 @cathbrooksbank What have we learned from the discussions at #ismbnetworking Why? It's a requirement It's fun Get more out than you put in #ISMBECCB
359621258607992832 Jul 23 06:29 @sjcockell RT @WonderMixTape: Q:How many successes do we expect in next 10-15 year? A: 27 #RandomNumberGeneration #ISMBECCB #SS05
359621391466762240 Jul 23 06:29 @VickySchneiderG @AidanBudd #ISMBECCB #ismbnetworking facilitation is key for impact and conflict solving! good communicator= good facilitator!
359621557506674690 Jul 23 06:30 @cathbrooksbank Bottlenecks - time, money, slow decision making #ismbnetworking #ISMBECCB
359621845839917056 Jul 23 06:31 @gordiecochran_ Another free t shirt, some sweets, pens, and a mouse pad. Good haul. #ISMBECCB
359621973845880833 Jul 23 06:32 @cathbrooksbank Non-invasive communication a useful tool for successful networks #ismbnetworking #ISMBECCB
359622126988300288 Jul 23 06:32 @sciencestream RT @cathbrooksbank: Resourcing networks - have to remember the cost of people's time - @NBlomberg at #ismbnetworking #ISMBECCB
359622236644196353 Jul 23 06:33 @cathbrooksbank Our task for today - "one node hop" - introduce a colleague to another contact #ismbnetworking #ISMBECCB
359622606627942400 Jul 23 06:34 @dagmarwaltemath RT @Alfons_Valencia: #ISMBECCB Patrick Aloy. experiments in memory / Alzheimer's in a mouse model to test a predicted drug. looking for a company to carry on.
359622621421252609 Jul 23 06:34 @cathbrooksbank Don't forget the second educational poster session - D01 to D20 now #ISMBECCB
359623103388721152 Jul 23 06:36 @cathbrooksbank Off to present my poster on the @IMI_JU EMTRAIN project at #ISMBECCB now. D08
359623258930282497 Jul 23 06:37 @i_am_kilpatrick Spreading today's conclusions on networks by blog/article, sounds good! #ISMBECCB #ISMBnetworking #WK05
359624669802270720 Jul 23 06:42 @Slmorg RT @cathbrooksbank: Off to present my poster on the @IMI_JU EMTRAIN project at #ISMBECCB now. D08
359624746775744513 Jul 23 06:43 @sciencestream RT @cathbrooksbank: Our task for today - "one node hop" - introduce a colleague to another contact #ismbnetworking #ISMBECCB
359624749837582336 Jul 23 06:43 @sciencestream RT @cathbrooksbank: Don't forget the second educational poster session - D01 to D20 now #ISMBECCB
359624752454828032 Jul 23 06:43 @sciencestream RT @cathbrooksbank: Off to present my poster on the @IMI_JU EMTRAIN project at #ISMBECCB now. D08
359625133008228352 Jul 23 06:44 @Slmorg @cathbrooksbank and Katrina off to present their posters #ismbeccb no D08 and D10
359625202512035840 Jul 23 06:45 @METUSNP #ISMBECCB @yaydinson A062 describes how METU-SNP can be used to intelligently filter SNPs after GWAS before moving on your own pipeline.
359626350929260545 Jul 23 06:49 @i_am_kilpatrick Lunch hall bizarrely quiet... #ISMBECCB
359626574909276163 Jul 23 06:50 @PLOSCompBiol Visit us at Booth 13 at #ismbeccb lunchtime today to meet @PLOSCompBiol eds Christine Orengo & @maricelkann
359626688872710146 Jul 23 06:50 @yaydinson #ISMBECCB #poster A062 #METU-SNP #pi-snp Decision Support Model for Alzheimer's Disease Diagnosis. http://instagram.com/p/cGw2RElBPW/
359627075579166722 Jul 23 06:52 @sciencestream RT @Slmorg: @cathbrooksbank and Katrina off to present their posters #ismbeccb no D08 and D10
359627629734801408 Jul 23 06:54 @yaydinson #ISMBECCB #poster N094 GPCRsort: New tool for Prediction of GPCRs classes http://instagram.com/p/cGxTXDFBPx/
359628143356674048 Jul 23 06:56 @yaydinson RT @METUSNP: #ISMBECCB @yaydinson A062 describes how METU-SNP can be used to intelligently filter SNPs after GWAS before moving on your own pipeline.
359628312726876160 Jul 23 06:57 @DrNoelCarter RT @sjcockell: Infectious diseases account for 25% of deaths worldwide. We use too many antibiotics #ismbeccb #SS05
359629230998425600 Jul 23 07:01 @ReleaseTEAMInc RT @jjspr: “@jjspr: Another one: trusting your science…. http://ibm.co/18sfXDc Need and desire to verify research results #ismbeccb” @CaroleAnneGoble
359629357855158273 Jul 23 07:01 @ReleaseTEAMInc RT @jjspr: Another one: trusting your science…. http://ibm.co/18sfXDc Need and desire to verify research results #ismbeccb
359629395587104769 Jul 23 07:01 @smrauch1 RT @EvoMRI: "Papers are data flirting exercises", says .@CaroleAnneGoble - show some metadata to make people want the real thing. #ismbeccb #openscience
359629991241191425 Jul 23 07:04 @moorejh RT @WonderMixTape: "Great time for drug repositioning & computational biology given data available" #SS05 #ISMBECCB
359630063827820547 Jul 23 07:04 @ConchitaCano RT @BioMickWatson: Puppies are cute, so we care; software isn't, so we don't. Solution: make software cute #ISMBECCB
359632879438925824 Jul 23 07:15 @sciencestream RT @yaydinson: #ISMBECCB #poster N094 GPCRsort: New tool for Prediction of GPCRs classes http://instagram.com/p/cGxTXDFBPx/
359632896996286464 Jul 23 07:15 @sciencestream RT @moorejh: RT @WonderMixTape: "Great time for drug repositioning & computational biology given data available" #SS05 #ISMBECCB
359633169928040448 Jul 23 07:16 @OmicsOmicsBlog RT @iddux: Software and data are as free as puppies: you still have to invest in a "free puppy": walk & feed it. @CaroleAnneGoble #ISMBECCB
359633487617204224 Jul 23 07:17 @bffo #ISMBbingo card http://t.co/AxXXppAMIO #ISMBECCB via @jonathancairns
359633549151846401 Jul 23 07:18 @jianhua55 RT @moorejh: RT @WonderMixTape: "Great time for drug repositioning & computational biology given data available" #SS05 #ISMBECCB
359634366336466944 Jul 23 07:21 @anilthanki Explaining poster means you need to talk loud so many people talking #ISMBECCB
359635429479309312 Jul 23 07:25 @GigaScience The triple nanopublication crew at poster B28 right now #ISMBECCB http://t.co/dEweSSygx3
359636270135263234 Jul 23 07:29 @AlonKeinan RT @GigaScience: Must be one of the only keynotes to end with Che Guevara. Viva la reproducibility revolution! #KN5 #ISMBECCB http://t.co/F46Q8I7mn7
359636329828597761 Jul 23 07:29 @Drosophilic RT @simon_andrews: Cheeriest ending to a keynote. Software is like a puppy. It costs a lot, gets sick and dies. #ISMBECCB
359636580459216896 Jul 23 07:30 @sciencestream RT @bffo: #ISMBbingo card http://t.co/AxXXppAMIO #ISMBECCB via @jonathancairns
359636593771950080 Jul 23 07:30 @sciencestream RT @anilthanki: Explaining poster means you need to talk loud so many people talking #ISMBECCB
359636597676834816 Jul 23 07:30 @matthewjbetts RT @AidanBudd: #ismb2013unconf there is a #ISMBECCB poster (D12) on Heidelberg #unseminar @HUBioinformatic described yesterday by Agnes Hotz-Wagenblatt
359636605574709248 Jul 23 07:30 @sciencestream RT @GigaScience: The triple nanopublication crew at poster B28 right now #ISMBECCB http://t.co/dEweSSygx3
359636843559530496 Jul 23 07:31 @PLOSCompBiol Interested in submitting a chapter? http://blogs.plos.org/biologue/2013/07/18/translational-bioinformatics-call-for-papers/ @maricelkann is available for your questions at 1.45pm at Booth 13 #ismbeccb
359638518294790146 Jul 23 07:37 @girlscientist Wow they seem a little harsher than @konrad_jk's! “@bffo: #ISMBbingo card http://t.co/7duI6nchim #ISMBECCB via @jonathancairns”
359638740261539842 Jul 23 07:38 @Feargal_Ryan Had someone describe my poster as sexy. That's always good #ISMBECCB
359640017397743616 Jul 23 07:43 @tehancocks Katrina's @emblebi Train Online poster D10 - visit us at http://www.ebi.ac.uk/training/online/ #elearning #bioinformatics #ISMBECCB http://t.co/aQn0q7rgyq
359640311288442881 Jul 23 07:45 @cathbrooksbank RT @tehancocks: Katrina's @emblebi Train Online poster D10 - visit us at http://www.ebi.ac.uk/training/online/ #elearning #bioinformatics #ISMBECCB http://t.co/aQn0q7rgyq
359640371686420481 Jul 23 07:45 @emblebi Looking forward to Janet Thornton and Niklas Blomberg's Introduction to Elixir. 2.10pm #SS06 #ISMBECCB
359640507053379585 Jul 23 07:45 @sciencestream RT @Feargal_Ryan: Had someone describe my poster as sexy. That's always good #ISMBECCB
359640514544418816 Jul 23 07:45 @sciencestream RT @tehancocks: Katrina's @emblebi Train Online poster D10 - visit us at http://www.ebi.ac.uk/training/online/ #elearning #bioinformatics #ISMBECCB http://t.co/aQn0q7rgyq
359640529471942656 Jul 23 07:45 @sciencestream RT @emblebi: Looking forward to Janet Thornton and Niklas Blomberg's Introduction to Elixir. 2.10pm #SS06 #ISMBECCB
359640725601796096 Jul 23 07:46 @dagmarwaltemath RT @emblebi: Looking forward to Janet Thornton and Niklas Blomberg's Introduction to Elixir. 2.10pm #SS06 #ISMBECCB
359641044003995650 Jul 23 07:48 @tehancocks @imi_ju EMTRAIN poster presented by @cathbrooksbank D08 #ISMBECCB http://t.co/LwFEqnI61J
359641751927005184 Jul 23 07:50 @cathbrooksbank RT @tehancocks: @imi_ju EMTRAIN poster presented by @cathbrooksbank D08 #ISMBECCB http://t.co/LwFEqnI61J
359642006370271233 Jul 23 07:51 @ClaireODonovan3 enjoyed #ISMBECCB and looking forward to CAFA 2014
359642395526168577 Jul 23 07:53 @JonathanCFuller RT @cathbrooksbank: Our task for today - "one node hop" - introduce a colleague to another contact #ismbnetworking #ISMBECCB
359642412232105984 Jul 23 07:53 @cathbrooksbank Education poster session antics at #ISMBECCB http://t.co/tp8IDS78oQ
359643165411639297 Jul 23 07:56 @sciencestream RT @ClaireODonovan3: enjoyed #ISMBECCB and looking forward to CAFA 2014
359643719055589377 Jul 23 07:58 @cathbrooksbank @bffo, @AidanBudd and @tehancocks chewing the fat at the education poster session #ISMBECCB http://t.co/687IzyPY31
359644797004300288 Jul 23 08:02 @sciencestream RT @cathbrooksbank: @bffo, @AidanBudd and @tehancocks chewing the fat at the education poster session #ISMBECCB http://t.co/687IzyPY31
359644864381587458 Jul 23 08:03 @johnpoverington Sad to be missing the #ELIXIR session this afternoon at #ISMBECCB
359645220087922689 Jul 23 08:04 @RomainStuder RT @jonathancairns: I present my highly unofficial #ISMBbingo card. Eyes down everyone! Comments welcome. #ISMBECCB http://t.co/CCiAzSXJGI
359645721802178560 Jul 23 08:06 @fredericschutz RT @jonathancairns: I present my highly unofficial #ISMBbingo card. Eyes down everyone! Comments welcome. #ISMBECCB http://t.co/CCiAzSXJGI
359646009942482944 Jul 23 08:07 @AlonKeinan BINGO! seriously. A real cool one @jonathancairns http://t.co/WYVMZGEitj #ISMBECCB #ISMBbingo
359646219007565827 Jul 23 08:08 @sciencestream RT @johnpoverington: Sad to be missing the #ELIXIR session this afternoon at #ISMBECCB
359646226175639553 Jul 23 08:08 @sciencestream RT @AlonKeinan: BINGO! seriously. A real cool one @jonathancairns http://t.co/WYVMZGEitj #ISMBECCB #ISMBbingo
359646263999873024 Jul 23 08:08 @jmchilton Up next and last last set of sessions: Integrated visualization and analysis. #ISMBECCB
359646832843952128 Jul 23 08:11 @tehancocks RT @AlonKeinan: BINGO! seriously. A real cool one @jonathancairns http://t.co/WYVMZGEitj #ISMBECCB #ISMBbingo
359646842797039616 Jul 23 08:11 @AidanBudd Thanks Cath! MT @cathbrooksbank: @bffo, @AidanBudd & @tehancocks chewing the fat @ education poster session #ISMBECCB http://t.co/gYWTIYWqk8
359647067926310913 Jul 23 08:11 @frank_foerster #ISMBECCB last sessions startet
359647298520752130 Jul 23 08:12 @tehancocks In Hall 1 for ELIXIR session on the infrastructure project for bioinformatics in Europe #ISMBECCB
359647391701409793 Jul 23 08:13 @larsjuhljensen RT @jonathancairns: I present my highly unofficial #ISMBbingo card. Eyes down everyone! Comments welcome. #ISMBECCB http://t.co/CCiAzSXJGI
359647442544771074 Jul 23 08:13 @Alfons_Valencia RT @emblebi: Looking forward to Janet Thornton and Niklas Blomberg's Introduction to Elixir. 2.10pm #SS06 #ISMBECCB
359647494487031808 Jul 23 08:13 @frank_foerster #ISMBECCB #PP74 Interplay of microRNAs, transcription factors and target genes: linking dynamic expression changes to function
359647543589732355 Jul 23 08:13 @cathbrooksbank @NBlomberg talking about @ELIXIREurope in hall 1 now - come and join the pan-European fun! #ISMBECCB
359647877129179136 Jul 23 08:15 @frank_foerster #ISMBECCB There were a lot of interesting posters the last two days and some nice discussions
359647934519836674 Jul 23 08:15 @tehancocks Large scale NGS is spreading across European universities. Lots of data produced and more to come. Need infrastructure! #ELIXIR #ISMBECCB
359648178951294976 Jul 23 08:16 @tehancocks Elixir will be a distributed data infrastructure for Europe. Like power system, not big facility like #LHC #ISMBECCB
359648264775151617 Jul 23 08:16 @yaydinson #ISMBECCB #poster NO46 Contaminator : a tool to clean up NGS data (our student Gungor Budak is one of… http://instagram.com/p/cG2K6dFBDv/
359648326825689090 Jul 23 08:16 @francisrowland My team mate, @JenniferCham, can now kick back and enjoy a liebfraumilch after her #ISMBECCB talk. #sketchnotes here: http://ebiinterfaces.wordpress.com/2013/07/23/sketchnote_ismb_ucd_talk/
359648371457269762 Jul 23 08:17 @cathbrooksbank @NBlomberg's mental model for @ELIXIREurope is a power grid with large, medium, small producers and consumers #ISMBECCB
359648371981565952 Jul 23 08:17 @log2ex Come hear my network biology talk "A context sensitive framework for the analysis of human signaling pathways" Hall 7 at 15:40 #ISMBECCB
359648596137750530 Jul 23 08:18 @reactome A big thank you to all that came by the poster…almost lost me voice! #ismbeccb
359648630447153153 Jul 23 08:18 @AidanBudd Thanks 4 your support MT @i_am_kilpatrick:Spreading today's conclusions on networks by blog/article, sounds good! #ISMBECCB #ISMBnetworking
359648761980534784 Jul 23 08:18 @Chris_Evelo Niklas Blomberg: Elixir will have an EBI hub and member states funded national spokes, a distributed infrastructure network #ismbeccb #ss06
359649225220435971 Jul 23 08:20 @reactome RT @jonathancairns: I present my highly unofficial #ISMBbingo card. Eyes down everyone! Comments welcome. #ISMBECCB http://t.co/CCiAzSXJGI
359649237996285952 Jul 23 08:20 @cathbrooksbank @ELIXIREurope nodes will continue to deliver their services through their own brands - @NBlomberg at #ISMBECCB
359649282346860545 Jul 23 08:20 @Chris_Evelo After the central ELIXIR introduction by Niklas we will haver presentations from the national nodes. #ismbeccb #ss06
359649308171182080 Jul 23 08:20 @sciencestream RT @jmchilton: Up next and last last set of sessions: Integrated visualization and analysis. #ISMBECCB
359649339079012353 Jul 23 08:20 @sciencestream RT @tehancocks: In Hall 1 for ELIXIR session on the infrastructure project for bioinformatics in Europe #ISMBECCB
359649354593738753 Jul 23 08:21 @sciencestream RT @frank_foerster: #ISMBECCB #PP74 Interplay of microRNAs, transcription factors and target genes: linking dynamic expression changes to function
359649363556958209 Jul 23 08:21 @32nm RT @jonathancairns: I present my highly unofficial #ISMBbingo card. Eyes down everyone! Comments welcome. #ISMBECCB http://t.co/CCiAzSXJGI
359649380384514051 Jul 23 08:21 @sciencestream RT @cathbrooksbank: @NBlomberg talking about @ELIXIREurope in hall 1 now - come and join the pan-European fun! #ISMBECCB
359649404820533248 Jul 23 08:21 @sciencestream RT @frank_foerster: #ISMBECCB There were a lot of interesting posters the last two days and some nice discussions
359649516535812098 Jul 23 08:21 @Alfons_Valencia Elixir session starting at hall 1 Bioinformatics infrastructure in Europe. Interesting for all of us and for our future research. #ISMBECCB
359649981931601920 Jul 23 08:23 @robinhaw Not going to win RT@jonathancairns: I present my highly unofficial #ISMBbingo card. Eyes down everyone! Comments welcome. #ISMBECCB
359650191319646209 Jul 23 08:24 @yaydinson #ISMBECCB #PP72 GWASdb has 20 times more GVs than GWAScatalog ( 146 537 GVs) and more to come @METUSNP
359650200203165700 Jul 23 08:24 @tehancocks Embassy Cloud will provide high volume data transfer to national nodes, critical for life science data future across Europe #ISMBECCB
359650299142610944 Jul 23 08:24 @cathbrooksbank @ELIXIREurope pilots: Cloud computing Authentication and authorisation HPC light path #ISMBECCB
359650331321307137 Jul 23 08:24 @Chris_Evelo @ELIXIREurope needs high quality compute and data transfer infrastructure to precompute data profiles and to ship data fast #ss06 #ismbeccb
359650517074448384 Jul 23 08:25 @rohitfarmer RT @bffo: #ISMBbingo card http://t.co/AxXXppAMIO #ISMBECCB via @jonathancairns
359650552826695680 Jul 23 08:25 @tipple RT @AmyeKenall: @utopiadocs : tool for scraping data out of pdf and giving it life again #ISMBECCB #KN5 http://t.co/ioDckMWaTG
359650561290809346 Jul 23 08:25 @cathbrooksbank Janet Thornton talking about #BioMedBridges in hall 1 now - pan-European, pan-research infrastructure fun! #ISMBECCB
359650631641858049 Jul 23 08:26 @tehancocks Janet Thornton now talking about #BioMedBridges and its role in forging strong links between biomedical science infrastructures #ISMBECCB
359650891042799618 Jul 23 08:27 @Chris_Evelo ELIXIR represented in BioMedBridges project that combined the (mostly ESFRI) initiatives for domain research infrastructures #ss06 #ismbeccb
359650901981528065 Jul 23 08:27 @cathbrooksbank Janet Thornton - all biomedical research infrastructures create and use data. #BioMedBridges builds data bridges between them #ISMBECCB
359651066675077120 Jul 23 08:27 @tehancocks #biomedbridges will link 13 BMS RIs from medicine and biology and add value to their work #ISMBECCB
359651737377849346 Jul 23 08:30 @monimunozto @suzilewis start feeding your Tweeter with #ISMBECCB gossip, please! Can't just get all my news from @bffo :)
359652014864613376 Jul 23 08:31 @Chris_Evelo .@Eurodish (nutrition ESFRI) and @Open_PHACTS (#semweb for life sciences and drug discovery IMI) not in BioMedBridges, bad #ss06 #ismbeccb
359652022414352385 Jul 23 08:31 @BIOBASE #ismbeccb Michael Tysiak, Metka Kraus, and Frank Schacherer at ISMB/ECCB in Berlin. Stop by booth #10 for a demo... http://fb.me/6qywv3SYO
359652093503619075 Jul 23 08:31 @sciencestream RT @cathbrooksbank: @ELIXIREurope nodes will continue to deliver their services through their own brands - @NBlomberg at #ISMBECCB
359652096615788544 Jul 23 08:31 @sciencestream RT @Chris_Evelo: After the central ELIXIR introduction by Niklas we will haver presentations from the national nodes. #ismbeccb #ss06
359652104299753473 Jul 23 08:31 @sciencestream RT @yaydinson: #ISMBECCB #PP72 GWASdb has 20 times more GVs than GWAScatalog ( 146 537 GVs) and more to come @METUSNP
359652109505294336 Jul 23 08:31 @sciencestream RT @cathbrooksbank: @ELIXIREurope pilots: Cloud computing Authentication and authorisation HPC light path #ISMBECCB
359652170578137089 Jul 23 08:32 @tehancocks #BioMedBridges has 3 infrastructure work packages - secure acces, standards and tech integration. Build e-infrastructure resources #ISMBECCB
359652190224252928 Jul 23 08:32 @cathbrooksbank Janet Thornton #BioMedBridges delivering infrastructure in three specific areas: Standards Technical integration Secure access #ISMBECCB
359652194888335362 Jul 23 08:32 @AidanBudd Were you @ "How to build networks of bioinformaticans" #ISMBECCB wkshp? Tweet with #ISMBNETWORKING to let us know to help us write it up
359652268632580096 Jul 23 08:32 @Alfons_Valencia Janet Thornton EBI director & ISCB senior award was the one behind ELIXIR all these years. Amazing dedication. Thanks Janet! #ISMBECCB”
359652360584314880 Jul 23 08:32 @rmflight RT @jonathancairns: I present my highly unofficial #ISMBbingo card. Eyes down everyone! Comments welcome. #ISMBECCB http://t.co/CCiAzSXJGI
359652473230729219 Jul 23 08:33 @Alexbateman1 RT @ClaireODonovan3: enjoyed #ISMBECCB and looking forward to CAFA 2014
359652741708128256 Jul 23 08:34 @cathbrooksbank Janet Thornton - five use cases will test the technical and integration work of #BioMedBridges #ISMBECCB
359652821127274496 Jul 23 08:34 @IMI_JU RT @tehancocks: @imi_ju EMTRAIN poster presented by @cathbrooksbank D08 #ISMBECCB http://t.co/LwFEqnI61J
359652858687266818 Jul 23 08:34 @rtraborn RT @jonathancairns: I present my highly unofficial #ISMBbingo card. Eyes down everyone! Comments welcome. #ISMBECCB http://t.co/CCiAzSXJGI
359652990115778561 Jul 23 08:35 @cathbrooksbank Janet Thornton - social bridges are an important part of #BioMedBridges. Highly relevant to #ISMBnetworking! #ISMBECCB
359653005164941312 Jul 23 08:35 @Chris_Evelo Our BridgeDb (Identifier mapping framework) fits nicely in the bridges that Janet Thornton describes are needed #ss06 #ismbeccb
359653185549377536 Jul 23 08:36 @tehancocks We need more pics of bridges across Europe for future #BioMedBridges presentations. Suggestions? #ISMBECCB http://t.co/BOWNlhN005
359653257544605697 Jul 23 08:36 @cathbrooksbank Second #BioMedBridges AGM will be open 10-12 march 2014 in Florence, Italy #ISMBECCB
359653410468929537 Jul 23 08:37 @paul_r_fisher #Elixr "sometimes we can't see the otherwise of the bridge when setting out....so we just have to have faith we will get there." #ISMBECCB
359653454479753216 Jul 23 08:37 @Chris_Evelo RT @cathbrooksbank: Second #BioMedBridges AGM will be open 10-12 march 2014 in Florence, Italy #ISMBECCB
359653587820871681 Jul 23 08:37 @cathbrooksbank @ixenario explaining what an @ELIXIREurope node is in hall 1 now #ISMBECCB
359653676396183554 Jul 23 08:38 @rtraborn In which @jonathancairns makes the greatest science conference bingo card I've ever seen: https://twitter.com/jonathancairns/status/359345620705746945 // #ismbeccb
359653707635363840 Jul 23 08:38 @AleksiKallio Just paid 12 euros for something that was essentially microwave pasta and Coke. Feedback to #ISMBECCB organisers: the lunch was a rip-off.
359653775218188290 Jul 23 08:38 @tehancocks Swiss Node for @ELIXIREurope the @ISBSIB founded in 1998. Lots of lessons to learn for future here from 130 bioinfo resources #ISMBECCB
359653897167572993 Jul 23 08:39 @Alfons_Valencia Janet Thornton. bridges can be Data, Interoperability or social. 10-12 march Florence open biomedbridges meeting. All welcome. #ISMBECCB”
359654070295867393 Jul 23 08:39 @jgoecks @nlbigas: challenges in cancer genomics viz: multi-D data, interactivity, interop b/t tools, data compression, usability #ISMB13 #ISMBECCB
359654305730543619 Jul 23 08:40 @tehancocks Seems like I am starting to annoy my non-bioinformatics Twitter followers... Oh well enjoy @PeeDubyaPee #ISMBECCB
359654318191808514 Jul 23 08:40 @Chris_Evelo SIB, Swiss ELIXIR node, offers 130 resources, Expasy / SwissProt best known #ss06 #ismbeccb
359654402858033152 Jul 23 08:41 @rtraborn Wyatt Clark (my friend & fmr IU colleague) is up, and will present his work: "Semantic Similarity: Better with Baysian Networks". #ismbeccb
359654457337839617 Jul 23 08:41 @cathbrooksbank @ixenario: training is an aspect of switzerland's @ELIXIREurope node as is HPC through vital-IT and the @ISBSIB resources #ISMBECCB
359654504397946881 Jul 23 08:41 @monimunozto Having a blast reading through #ISMBECCB tweets. They refresh at ~15/min rate ... #WishIWereThere #NextTime #ILoveScience
359654573864001538 Jul 23 08:41 @Alfons_Valencia Ioannis Xenarios presenting the Swiss SIB as ELIXIR node. Best example of what a national bioinformatics institute should be. #ISMBECCB
359654587789086720 Jul 23 08:41 @frank_foerster #ISMBECCB #PP78 Integrating sequence expression and interaction data to determine condition-specific miRNA regulation
359654877267365889 Jul 23 08:42 @Chris_Evelo SwissProt integration in UniProt nice examples of the kind of technology integration bridges we need #ss06 #ISMBECCB
359654989431455744 Jul 23 08:43 @tehancocks Taking care of data and turning it into knowledge and preserving it will be v important for future bioscience research @ixenario #ISMBECCB
359655001125179392 Jul 23 08:43 @cathbrooksbank Love @ixenario's data-to-knowledge slide in @ELIXIREurope session at #ISMBECCB http://t.co/ewC8Es9fy1
359655150417227776 Jul 23 08:44 @bffo Swiss Node for @ELIXIREurope presented by Ioannis Xenarios has an education site: http://www.isb-sib.ch/education.html #ISMBECCB
359655229710540800 Jul 23 08:44 @Alfons_Valencia RT @cathbrooksbank: Love @ixenario's data-to-knowledge slide in @ELIXIREurope session at #ISMBECCB http://t.co/ewC8Es9fy1
359655342369538048 Jul 23 08:44 @JMGIzarzugaza RT @bffo: #ISMBbingo card http://t.co/AxXXppAMIO #ISMBECCB via @jonathancairns
359655436259037185 Jul 23 08:45 @tehancocks Biocuration is real human work. @ixenario comparing their work to Sisyphus and medieval monks, but with modern tech and hard work! #ISMBECCB
359655451907997696 Jul 23 08:45 @cathbrooksbank @ixenario there is a misconception about what biocurators do - human synthesis of knowledge is a vital part of it #ISMBECCB
359655576684339202 Jul 23 08:45 @rtraborn Needs 'delegate misses whole session looking for washroom' MT @jonathancairns: I present my #ISMBbingo card.#ISMBECCB http://t.co/DWotnC12tW
359655763632865281 Jul 23 08:46 @FHNinfo RT @GenomeAnalysis: Find out more about the Year in Industry scheme at TGAC from Rubina's poster presentation today at #ISMBECCB http://t.co/Uvw8T7rXty
359655896646819842 Jul 23 08:47 @AidanBudd #ISMBECCB #ismbnetworking we will circulate 1st draft document summarising outcome of wkshp to anyone interested in writing this with us...
359656121071435777 Jul 23 08:47 @AidanBudd #ISMBECCB #ismbnetworking if u want to contribute (hopefully we find a way that lets us all be authors) to writing up wkshp tweet/mail us
359656314349174785 Jul 23 08:48 @eskay8 RT @jonathancairns: I present my highly unofficial #ISMBbingo card. Eyes down everyone! Comments welcome. #ISMBECCB http://t.co/CCiAzSXJGI
359656471287435265 Jul 23 08:49 @tehancocks How to know if your service is used/important? Take it offline and wait for panicked email and phone calls! @ixenario #ISMBECCB
359656606704730112 Jul 23 08:49 @rtraborn WC discussing cases where information content does not follow from ontology structure. How to calculate IC from a subgraph? #ismbeccb #PP76
359656617979035649 Jul 23 08:49 @cathbrooksbank @ixenario How do you tell whether a service is useful - pull it offline and find out how long it takes for users to complain #ISMBECCB
359656660383432704 Jul 23 08:50 @VickySchneiderG RT @bffo: Swiss Node for @ELIXIREurope presented by Ioannis Xenarios has an education site: http://www.isb-sib.ch/education.html #ISMBECCB
359656760291770368 Jul 23 08:50 @Chris_Evelo @barendmons implicitly challenged to keep in time with Swiss precision ;-) #ss06 #ismbeccb
359656785717637120 Jul 23 08:50 @paul_r_fisher #Elixir "if you want to see if anyone uses your service, pull it from the internet and measure the complaints". #ISMBECCB cb
359656914411466754 Jul 23 08:51 @cathbrooksbank @barendmons talking about Netherlands @ELIXIREurope node in hall 1 at #ISMBECCB
359657040521601024 Jul 23 08:51 @Chris_Evelo "We focus on everything", not so crazy if you want to "integrate everything" #ss06 #ismbeccb
359657177759219713 Jul 23 08:52 @tehancocks Report from Dutch @ELIXIREurope node. Nodes do different things for their country and for Elixir as a whole. #ISMBECCB
359657402267729924 Jul 23 08:53 @Alfons_Valencia RT @cathbrooksbank: @barendmons talking about Netherlands @ELIXIREurope node in hall 1 at #ISMBECCB
359657672775184384 Jul 23 08:54 @Chris_Evelo Many things (like training programs) can and should be repeated in different ELXIR national nodes #ss06 #ismbeccb
359657760104779778 Jul 23 08:54 @marc_rr Yes we do! RT @bffo: Swiss Node for @ELIXIREurope presented by Ioannis Xenarios has an education site: http://www.isb-sib.ch/education.html #ISMBECCB
359657806435074048 Jul 23 08:54 @cathbrooksbank @barendmons mentions #GOBLET training in his @ELIXIREurope talk at #ISMBECCB
359657955039260672 Jul 23 08:55 @BUbioinfo RT @GigaScience: The triple nanopublication crew at poster B28 right now #ISMBECCB http://t.co/dEweSSygx3
359657997359792130 Jul 23 08:55 @Chris_Evelo Dutch Bioinformatics training (from @NBIC_nl Biowise) one of the things offered by Dutch ELXIR node. #ss06 #ismbeccb
359658021078581249 Jul 23 08:55 @tara_onec Another free t shirt, some sweets, pens, and a mouse pad. Good haul. #ISMBECCB
359658356744519681 Jul 23 08:56 @rtraborn ISMB delegate power move --> RT @tara_onec: Another free t shirt, some sweets, pens, and a mouse pad. Good haul. #ISMBECCB
359658614706802692 Jul 23 08:57 @Chris_Evelo Dutch Tech Center for Life Sciences @DTL_nl and especially its data stewardship centre DISC will offer services for ELIXIR #ss06 #ismbeccb
359659009332088832 Jul 23 08:59 @cathbrooksbank @barendmons - 3 NL flagships Training and education IAAS (wot's this?) Data interoperability #ISMBECCB
359659025190764544 Jul 23 08:59 @sciencestream RT @tehancocks: Seems like I am starting to annoy my non-bioinformatics Twitter followers... Oh well enjoy @PeeDubyaPee #ISMBECCB
359659038541230081 Jul 23 08:59 @sciencestream RT @Chris_Evelo: SIB, Swiss ELIXIR node, offers 130 resources, Expasy / SwissProt best known #ss06 #ismbeccb
359659127200419840 Jul 23 08:59 @tehancocks RT @Chris_Evelo: Many things (like training programs) can and should be repeated in different ELXIR national nodes #ss06 #ismbeccb
359659137778454528 Jul 23 08:59 @Chris_Evelo Training, IAAS and data interoperability core services Dutch node works on. #ss06 #ismbeccb
359665620079489024 Jul 23 09:25 @Alfons_Valencia Niklas Blomberg is now introducing the Swedish node. Including the large protein atlas project. (Niklas is Swedish by the way) #ISMBECCB
359666443803045888 Jul 23 09:28 @cathbrooksbank @NBlomberg: standards will be important for @ELIXIREurope; need to make it easy for scientists to deposit data #ISMBECCB
359666557284134912 Jul 23 09:29 @list88buid RT @AidanBudd: .@pjacock thanks for #NextGenBUG link. I'd like to find/build a list of such things, ideas on how to do that well? #ismbeccb #ismb2013unconf
359666578964480000 Jul 23 09:29 @tehancocks Panel discussion for @ELIXIREurope - need to work towards data standards. Links with IMI projects @Open_PHACTS @isatools #ISMBECCB
359666838566731777 Jul 23 09:30 @log2ex About to start my talk , hall 7 . A context sensitive framework for the analysis of human signaling pathways . #ISMBECCB
359666990832549888 Jul 23 09:31 @tehancocks Data standards are great. But need to be nurtured and researchers need to be encouraged to use them @ixenario #ISMBECCB
359667260014596097 Jul 23 09:32 @Chris_Evelo ISA-tab Based study capturing, with ontology mappings and templates from Dutch ELIXIR based on phenotype data infrastructure #ss06 #ismbeccb
359668006185467905 Jul 23 09:35 @cathbrooksbank Much love in the room at the @ELIXIREurope session; @justinpaschal and @Alfons_Valencia thanking each other profusely :-) #ISMBECCB
359668066671534082 Jul 23 09:35 @tehancocks Panel discussion - @bffo asked about UK training focus and links with #GOBLET #ISMBECCB
359668153002885121 Jul 23 09:35 @Chris_Evelo @CaroleAnneGoble: UK node (not EBI) focussing on training in ELIXIR #ss06 #ismbeccb
359668296473264129 Jul 23 09:36 @tehancocks .@CaroleAnneGoble says lots of experts in UK. Leverage existing training from clinicians, PhD progs, workshops and courses #ISMBECCB
359668545132564482 Jul 23 09:37 @cathbrooksbank @CaroleAnneGoble explaining #GOBLET and @swcarpentry to the @ELIXIREurope audience at #ISMBECCB
359668772149280770 Jul 23 09:38 @tehancocks UK Elixir training community from @emblebi @GenomeAnalysis and #CGAT in Oxford #ISMBECCB
359668968736305152 Jul 23 09:38 @sciencestream RT @log2ex: About to start my talk , hall 7 . A context sensitive framework for the analysis of human signaling pathways . #ISMBECCB
359669007596531713 Jul 23 09:39 @sciencestream RT @tehancocks: Data standards are great. But need to be nurtured and researchers need to be encouraged to use them @ixenario #ISMBECCB
359669075598786561 Jul 23 09:39 @tehancocks Training - @Alfons_Valencia need to have different focus for level, language, specialist needs and output of infrastructure built #ISMBECCB
359669237465358338 Jul 23 09:40 @GigaScience A more technical spin-off from #WK3 is now starting in salon 81 on the G floor. Marco Roos will present on ROs & nanopubs #TT34 #ISMBECCB
359669320126701570 Jul 23 09:40 @cathbrooksbank @Alfons_Valencia in @ELIXIREurope session: training different in different countries and training is different from education #ISMBECCB
359669551278981121 Jul 23 09:41 @tehancocks Lots of training documents on @ELIXIREurope website. Go have a read! 41 might take time to read! #ISMBECCB
359669750776856576 Jul 23 09:42 @GigaScience Marco Roos introducing things: bioinformaticians don't have notebooks, they just have messy folders. #ISMBECCB #TT34
359669927361261568 Jul 23 09:42 @i_am_kilpatrick Final tech talk on XXmotif algorithm #ISMBECCB #TT35
359670149172830213 Jul 23 09:43 @cathbrooksbank @kaythaney @CaroleAnneGoble @swcarpentry @ELIXIREurope only via vast numbers of tweets! #ISMBECCB
359670203006713859 Jul 23 09:43 @tehancocks @Chris_Evelo asks can we be sure we are doing the right thing? @NBlomberg 'focus on small key needs for Europe, plug gaps later' #ISMBECCB
359670522671407104 Jul 23 09:45 @PLOSCompBiol #ismbeccb Looking for something to read on the plane?@PLOSCompBiol articles on the open development of scientific software & more @ booth 13
359670802188214274 Jul 23 09:46 @i_am_kilpatrick XXmotif seems to give good results on yeast TFs compared to other algorithms... #ISMBECCB #TT35
359670803647832064 Jul 23 09:46 @tehancocks Clinical trials data - is Elixir looking at accessing this data? @NBlomberg 'look to translational networks to solve this' #ISMBECCB
359671099350466560 Jul 23 09:47 @i_am_kilpatrick ...but unclear (in the talk anyway) how much optimisation of parameters was done for XXmotif vs others #ISMBECCB #TT35
359671214408605696 Jul 23 09:47 @AidanBudd #storify archive of tweets from today's #ISMBECCB #ismbnetworking workshop http://storify.com/AidanBudd/ismb-networking-workshop-v2 will keep updating it...
359671427638628353 Jul 23 09:48 @cathbrooksbank RT @AidanBudd: #storify archive of tweets from today's #ISMBECCB #ismbnetworking workshop http://storify.com/AidanBudd/ismb-networking-workshop-v2 will keep updating it...
359671757986209792 Jul 23 09:50 @tehancocks What is Elixir position on #OpenAccess asks @bffo - big push at many levels, still difficult for biomedical data, need #dataaccess #ISMBECCB
359671831764021248 Jul 23 09:50 @cathbrooksbank @AmyeKenall @VickySchneiderG @GigaScience @_inundata marvellous! I didn't get to see any of the other training posters. #ISMBECCB
359672030993465345 Jul 23 09:51 @AidanBudd sounds like me MT @GigaScience: Marco Roos introducing things: bioinformaticians don't have notebooks, just messy folders. #ISMBECCB #TT34
359672108831354882 Jul 23 09:51 @Chris_Evelo There is a strong push towards open data and accessible data (where privacy can still be assured) in Europe and thus ELIXIR #ss06 #ismbeccb
359672182944694275 Jul 23 09:51 @cathbrooksbank RT @F1000Posters: Folks at #ISMBECCB, don't forget to extend the visibility of your poster and slides - submit in 10 minutes online at http://t.co/sOCN6HtFxX
359672231749623808 Jul 23 09:51 @pjacock RT @BioMickWatson: UK university researchers assesed by REF. Show me where REF values reproducibility #ISMBECCB
359672476264964097 Jul 23 09:52 @yaydinson RT @AleksiKallio: You're lost and hungry, bathroom's locked and the coffee has run out. ICC Berlin in a nutshell. #ISMBECCB
359672538059640834 Jul 23 09:53 @Chris_Evelo Israel wanting to focus on clinical data. #ss06 #ismbeccb BioMedBridges also to make link to BBMRI
359672636516737024 Jul 23 09:53 @GigaScience Marco showing RO analytics & quality report. Interesting way to see the reproducibility decay Carole Goble was talking about #TT34 #ISMBECCB
359672746600443904 Jul 23 09:53 @sciencestream RT @tehancocks: UK Elixir training community from @emblebi @GenomeAnalysis and #CGAT in Oxford #ISMBECCB
359672922383720448 Jul 23 09:54 @cathbrooksbank @kaythaney I'm reliably informed that the slides will also go up on the @ELIXIREurope website too. #ISMBECCB
359673368259211264 Jul 23 09:56 @swcarpentry RT @cathbrooksbank: @CaroleAnneGoble explaining #GOBLET and @swcarpentry to the @ELIXIREurope audience at #ISMBECCB
359673842676928512 Jul 23 09:58 @Chris_Evelo #altmetrics reversed? #ismbeccb program book only list first and last authors for posters. (In a lot of cases that consumes more text)
359674050223673344 Jul 23 09:59 @cathbrooksbank @NBlomberg: we have a responsibility to make sure @ELIXIREurope interoperable with other research infrastructures #ISMBECCB
359674090073751555 Jul 23 09:59 @GigaScience Marco R now talking about the ROs & nanopubs in case study we are working on, with #usegalaxy SOAPdenovo workflow as example #TT34 #ISMBECCB
359674883493470208 Jul 23 10:02 @cathbrooksbank @CaroleAnneGoble: what will success look like for @ELIXIREurope ? #ISMBECCB
359675062799962112 Jul 23 10:03 @i_am_kilpatrick Q mentions Tompa benchmark of discovery algorithms - apparently XXmotif paper only reports specificity (not sn, ppv etc)?! #ISMBECCB #TT35
359675276810137602 Jul 23 10:04 @cathbrooksbank @NBlomberg: in short term interoperable resources and training delivered by @ELIXIREurope would be indicators of success.#ISMBECCB
359675738888208386 Jul 23 10:05 @cathbrooksbank @barendmons: success would be that no new data project would consider starting up without consulting @ELIXIREurope first. #ISMBECCB
359676016731500544 Jul 23 10:06 @VickySchneiderG RT @cathbrooksbank: @CaroleAnneGoble explaining #GOBLET and @swcarpentry to the @ELIXIREurope audience at #ISMBECCB
359676411608444929 Jul 23 10:08 @AidanBudd u can also share experience of networks/communities of bioinformaticians @ LinkedIn http://www.linkedin.com/groups/Networking-Bioinformatics-Workshop-ISMB-ECCB-5001813 #ismbeccb #ismbnetworking
359678362798665730 Jul 23 10:16 @SahaSurya RT @bffo: .@CaroleAnneGoble 's reference to Freire's paper on #reproducibility framework: http://dl.acm.org/citation.cfm?id=2213908 #ISMBECCB
359678713660588036 Jul 23 10:17 @jonathancairns Missed my poster on ChIP-seq + DE integration? Here's my Rcade software: http://www.bioconductor.org/packages/release/bioc/html/Rcade.html & poster: https://dl.dropboxusercontent.com/u/33389013/STAT1.pdf #ISMBECCB
359680438589067265 Jul 23 10:24 @sciencestream RT @cathbrooksbank: @kaythaney I'm reliably informed that the slides will also go up on the @ELIXIREurope website too. #ISMBECCB
359680465642328064 Jul 23 10:24 @sciencestream RT @Chris_Evelo: #altmetrics reversed? #ismbeccb program book only list first and last authors for posters. (In a lot of cases that consumes more text)
359680515877515264 Jul 23 10:24 @sciencestream RT @cathbrooksbank: @CaroleAnneGoble: what will success look like for @ELIXIREurope ? #ISMBECCB
359681120339636227 Jul 23 10:27 @pjacock Paper on #ISMBECCB venue selection: Burkhard Rost et al (2012), Paving the future: finding suitable ISMB venues http://dx.doi.org/10.1093/bioinformatics/bts420
359682757263257600 Jul 23 10:33 @i_am_kilpatrick Cool #OA badge from the nice folks at @PLOSCompBiol :) #ISMBECCB http://t.co/FwOjNJ3nX1
359682882756812801 Jul 23 10:34 @PLOSCompBiol RT @i_am_kilpatrick: Cool #OA badge from the nice folks at @PLOSCompBiol :) #ISMBECCB http://t.co/FwOjNJ3nX1
359682892928008192 Jul 23 10:34 @heathermvincent RT @jonathancairns: I present my highly unofficial #ISMBbingo card. Eyes down everyone! Comments welcome. #ISMBECCB http://t.co/CCiAzSXJGI
359683964253913090 Jul 23 10:38 @yaydinson #ISMBECCB #KN6 David Eisenberg " saved best for the last" talk titled "Protein Interactions in Health and Disease"
359684015407636481 Jul 23 10:38 @GenomeAnalysis RT @tehancocks: UK Elixir training community from @emblebi @GenomeAnalysis and #CGAT in Oxford #ISMBECCB
359684151248560128 Jul 23 10:39 @pedrobeltrao The gender unbalance stands out in the list of senior scientists award #ISMBECCB
359684619303518208 Jul 23 10:41 @reactome Looking forward to the last talk at #ISMBECCB : David Eisenberg - “Protein Interactions in Health and Disease”
359684653529055233 Jul 23 10:41 @jonathancairns Final final final talk of #ISMBECCB. It's #KN6, David Eisenberg. Glowing introduction!
359684869447626752 Jul 23 10:42 @larsjuhljensen RT @pedrobeltrao: The gender unbalance stands out in the list of senior scientists award #ISMBECCB
359684873176358913 Jul 23 10:42 @RomainStuder RT @pedrobeltrao: The gender unbalance stands out in the list of senior scientists award #ISMBECCB
359685176286134273 Jul 23 10:43 @froggleston Another great ISMB this year! Homeward bound! #ismbeccb 
359685378065711104 Jul 23 10:44 @iddux Davis Eisenberg was tutored by John T. Edsall. Which got him into proteins. #ISMBECCB #keynote
359685434042880000 Jul 23 10:44 @kastacholamine RT @pedrobeltrao: The gender unbalance stands out in the list of senior scientists award #ISMBECCB
359685485070782468 Jul 23 10:44 @Alfons_Valencia “@pedrobeltrao: The gender unbalance ... senior scientists award #ISMBECCB” my take: it reflects history but not future or intentions
359685612154003457 Jul 23 10:45 @Alfons_Valencia RT @yaydinson: #ISMBECCB #KN6 David Eisenberg " saved best for the last" talk titled "Protein Interactions in Health and Disease"
359685732882857985 Jul 23 10:45 @i_am_kilpatrick RT @Alfons_Valencia: “@pedrobeltrao: The gender unbalance ... senior scientists award #ISMBECCB” my take: it reflects history but not future or intentions
359686136618160128 Jul 23 10:47 @Chris_Evelo DE's plan to calculate hydrogen bond energy did not work out since coordinates for known protein structure not available #kn6?#ismbeccb
359686284022775808 Jul 23 10:47 @larsjuhljensen David Eisenberg was worried he couldn't explain protein oligomerization, but not worried enough to become a creationist #ISMBECCB #KN6
359686432845082624 Jul 23 10:48 @Alfons_Valencia Burkhard Rost about David Eisenberg: a scientist that changed paradigms and strongly influenced the development of bioinformatics #ISMBECCB
359686624206008320 Jul 23 10:49 @iddux Oh, yes. Eisenberg Domain swapping. That's one of the things that got *me* into structural bioinformatics. #ISMBECCB
359686748772630530 Jul 23 10:49 @YiXing77 @ongenetics what is 'simplified RNAseq analysis'? #ISMBECCB
359686757505179648 Jul 23 10:49 @pedrobeltrao RT @Alfons_Valencia: “@pedrobeltrao: The gender unbalance ... senior scientists award #ISMBECCB” my take: it reflects history but not future or intentions
359686778589937665 Jul 23 10:49 @drricky RT @BioMickWatson: Puppies are cute, so we care; software isn't, so we don't. Solution: make software cute #ISMBECCB
359686815621451777 Jul 23 10:49 @ongenetics #ISMBECCB keynote/awardee David S. Eisenberg did multiple postdocs, has spent 41 years at one place (UCLA), both atypical for such stature.
359687502291939328 Jul 23 10:52 @Alfons_Valencia Herero oligomers favored by colocalization lead to the development of the Rosetta Stone approach (Ed Marcotte) 99 seminal paper) #ISMBECCB
359687825274306561 Jul 23 10:53 @StefanieButland RT @bffo: .@CaroleAnneGoble provides some definitions 2 reproducibility #ismbeccb http://t.co/6wxIlmfYvP
359688026567348225 Jul 23 10:54 @RomainStuder ProLinks database is a collection of inferences of functional linkages between proteins using 4 methods. http://prolinks.mbi.ucla.edu #ISMBECCB
359688074978013184 Jul 23 10:54 @iddux DE on ProLinks http://prolinks.mbi.ucla.edu #ISMBECCB
359688112760295424 Jul 23 10:55 @Alfons_Valencia Eisenberg. Rosetta Stone followed by Matteo Pellegrini phylogenetic profiles. These methods initiated a full field of research. #ISMBECCB
359688168611643396 Jul 23 10:55 @ongenetics Eisenberg and evolution - the Rosetta stone method and phylogenetic profiles. http://prolinks.mbi.ucla.edu will have 30 eukaryotes soon. #ISMBECCB
359688246810247169 Jul 23 10:55 @RomainStuder Database of Interacting Proteins http://dip.doe-mbi.ucla.edu #ISMBECCB
359688333305196546 Jul 23 10:55 @Chris_Evelo Early detective work, find proteins that were connected or (only) co-evolved to predict PPI's #kn6 #ismbeccb
359688460803645440 Jul 23 10:56 @yaydinson #ISMBECCB #KN6 DE mentions http://prl.mbi.ucla.edu/prlbeta/prolinks.jsp for inferring functional linkages between proteins
359688764265725952 Jul 23 10:57 @pjacock Has @ISMBECCB announced that #ISMBECCB 2015 will be at the Convention Centre #Dublin yet? The CCD did in back in May: http://www.theccd.ie/index.jsp?p=100&n=108&a=491
359688830888058882 Jul 23 10:57 @pjacock Conferences & big money: #ISMBECCB 2015 “is set to bring in almost €3m in revenue to Ireland’s capital city.” #Dublin http://www.theccd.ie/index.jsp?p=100&n=108&a=491
359688836701356032 Jul 23 10:57 @ongenetics Eisenberg also has the protein interaction database: DIP http://dip.doe-mbi.ucla.edu #ISMBECCB
359688984022093824 Jul 23 10:58 @pjacock #ISMBECCB should have place-holder pages up already for 2014 (ISMB in #Boston, where’s ECCB?) and 2015 (ISBM/ECCB in #Dublin)
359689003521413122 Jul 23 10:58 @RomainStuder RT @pjacock: Has @ISMBECCB announced that #ISMBECCB 2015 will be at the Convention Centre #Dublin yet? The CCD did in back in May: http://t.co/3GLcPh1w7e
359689012610473984 Jul 23 10:58 @Alfons_Valencia Based on the methods Ioannis Xenarios started the DIP database now part of the PPI consortium #ISMBECCB
359689040997515266 Jul 23 10:58 @iddux @pjacock yes. Official announcement of Dublin 2015 has been made. #ISMBECCB
359689064548548609 Jul 23 10:58 @Alfons_Valencia RT @iddux: Oh, yes. Eisenberg Domain swapping. That's one of the things that got *me* into structural bioinformatics. #ISMBECCB
359689143128817665 Jul 23 10:59 @i_am_kilpatrick RT @pjacock: Has @ISMBECCB announced that #ISMBECCB 2015 will be at the Convention Centre #Dublin yet? The CCD did in back in May: http://t.co/3GLcPh1w7e
359689145733496832 Jul 23 10:59 @Alfons_Valencia RT @ongenetics: #ISMBECCB keynote/awardee David S. Eisenberg did multiple postdocs, has spent 41 years at one place (UCLA), both atypical for such stature.
359689145901260800 Jul 23 10:59 @Hoellenmotte David Eisenberg on evolution of PPIs: "I wasn't puzzled enough to become a creationist..." #ISMBECCB #kn6
359689212552945664 Jul 23 10:59 @PLOSCompBiol Head to Hall 1 at 4.35pm at #ismbeccb for the @ISCB Senior Scientist Accomplishment Award keynote by David Eisenberg http://www.ploscompbiol.org/article/info:doi/10.1371/journal.pcbi.1003116
359689244123467777 Jul 23 10:59 @iddux RT @Hoellenmotte: David Eisenberg on evolution of PPIs: "I wasn't puzzled enough to become a creationist..." #ISMBECCB #kn6
359689326252142594 Jul 23 10:59 @Alfons_Valencia RT @pjacock: Conferences & big money: #ISMBECCB 2015 “is set to bring in almost €3m in revenue to Ireland’s capital city.” #Dublin http://t.co/3GLcPh1w7e
359689367461183489 Jul 23 11:00 @Chris_Evelo DE there is no reason to develop things like PPI databases only for the US or Europe. +1! #kn6 #ismbeccb
359689420183580672 Jul 23 11:00 @arneelof Death in alzheimers is increasing #ismbeccb
359689435505377282 Jul 23 11:00 @arneelof RT @Hoellenmotte: David Eisenberg on evolution of PPIs: "I wasn't puzzled enough to become a creationist..." #ISMBECCB #kn6
359689681144786945 Jul 23 11:01 @Annatramontano3 ECCB 2014 in Strasbourg 7-10 sept #ISMBECCB
359689930609393664 Jul 23 11:02 @arneelof The steric zipper hypothesis and the cylindrin hypotheses. #ismbeccb
359689984049037313 Jul 23 11:02 @Alfons_Valencia Eisenberg Now into amyloids. Zipper hypothesis of interdigitated b-sheets #ISMBECCB
359690231504584705 Jul 23 11:03 @rtraborn Eisenberg is giving a v nice keynote. He clearly hasn't run out of steam as many of us have (your humble correspondent included). #ismbeccb
359690234537050116 Jul 23 11:03 @pjacock #ISMBECCB should have place-holder pages up already for 2014 (ISMB in #Boston, ECCB in #Strasbourgh) and 2015 (ISBM/ECCB in #Dublin)
359690315772329986 Jul 23 11:03 @arneelof Only seven aa long peptides can mimic amyloid fibers. And small crystals #ismbeccb
359690531724472320 Jul 23 11:04 @SahaSurya #ISMBECCB Thanks for all the tweets! Too many tweeps to mention :-) See y'all at ISMB 2014 in Boston
359690674636988418 Jul 23 11:05 @ISMBECCB Congrats to 2013 ISCB Senior Scientist Award winner David Eisenberg, his keynote: Protein interactions in health and disease #ismbeccb
359690776957034496 Jul 23 11:05 @jonathancairns Mesmerizing animation of steric zippers. They stick together like velcro. Or, er, indeed, zips. #ISMBECCB #KN6
359690853893152768 Jul 23 11:05 @ongenetics Eisenberg now works on amyloid diseases (there are now 40 amyloid diseases, including some p53 defects), smaller clusters worst. #ISMBECCB
359690876357849089 Jul 23 11:06 @johnpharmd RT @GigaScience: CG on importance of sharing systems: 80% of workflows are made from adapting other peoples workflows #ISMBECCB #KN5
359691014140735491 Jul 23 11:06 @arneelof 115 crystal structures of peptides #ismbeccb
359691400901705730 Jul 23 11:08 @arneelof Using protein design to scan for new peptides (and also promotes the 3d 1d method) #ismbeccb
359691423982948353 Jul 23 11:08 @Alfons_Valencia Welcome Anna Tramontano. @Annatramontano3 A new twitter player converted during #ISMBECCB
359691690811998211 Jul 23 11:09 @isatools Great! "RT @GigaScience: Lot of shoutouts from @CaroleAnneGoble including @isatools #KN5 #ISMBECCB"
359691737066770432 Jul 23 11:09 @Annatramontano3 Simply getting younger by the minute! #ISMBECCB
359691768431783936 Jul 23 11:09 @yaydinson #ISMBECCB #KN6 DE steric zippers are pairs of n-register B-sheets, as of 2013 we know 110 x-ray str. of steric zippers from 15 diseases
359691940624732160 Jul 23 11:10 @Alfons_Valencia Eisenberg blocking fiber elongation by capping peptides. Combining computation experiments and crystallography Beautiful. #ISMBECCB
359692063832424448 Jul 23 11:10 @johnpharmd RT @GigaScience: Nice factoid from @CaroleAnneGoble : R is the most cited platform in the literature #ISMBECCB #KN5
359692070794964992 Jul 23 11:10 @Feargal_Ryan RT @pjacock: Has @ISMBECCB announced that #ISMBECCB 2015 will be at the Convention Centre #Dublin yet? The CCD did in back in May: http://t.co/3GLcPh1w7e
359692347803578368 Jul 23 11:11 @ongenetics Eisenberg: There are now 115 structures of steric zippers in amyloid proteins. He has designed specific inhibitors of several. #ISMBECCB
359692374542270464 Jul 23 11:11 @sciencestream RT @pjacock: Paper on #ISMBECCB venue selection: Burkhard Rost et al (2012), Paving the future: finding suitable ISMB venues http://t.co/2TY60rhBPE
359692395715117056 Jul 23 11:12 @sciencestream RT @i_am_kilpatrick: Cool #OA badge from the nice folks at @PLOSCompBiol :) #ISMBECCB http://t.co/FwOjNJ3nX1
359692591370997760 Jul 23 11:12 @arneelof "@Alfons_Valencia: Welcome Anna Tramontano. @Annatramontano3 A new twitter player converted during #ISMBECCB" you will always be young
359692796866723841 Jul 23 11:13 @Alfons_Valencia Eisenberg now the cylindrin hypothesis. Small toxic oligomers. Experiments with crystalline. #ISMBECCB
359692824926633984 Jul 23 11:13 @GigaScience RT @arneelof: "@Alfons_Valencia: Welcome Anna Tramontano. @Annatramontano3 A new twitter player converted during #ISMBECCB" you will always be young
359693431104217088 Jul 23 11:16 @mjambon RT @iddux: #ISMBECCB @CaroleAnneGoble talks about a sadly less-than-well-known Mertonian Norms for science, 1942: http://en.wikipedia.org/wiki/Mertonian_norms
359693803969445888 Jul 23 11:17 @arneelof After 90 in register fibrill structure one our of register was found (toxic form?) #ismbeccb
359693853093142528 Jul 23 11:17 @Hoellenmotte Upcoming: Snow out of the air con in Hall 1! ;-) #ismbeccb
359693951877394433 Jul 23 11:18 @rtraborn Eisenberg's work, a combination of X-ray crystallography, computation, biochemistry & experimental therapeutics is truly elegant. #ismbeccb
359694199320363009 Jul 23 11:19 @Alfons_Valencia Eisenberg. The rules of symmetry impose constrains and determine architecture. Amazingly enough it relates with toxicity. #ISMBECCB
359694286322802689 Jul 23 11:19 @Annatramontano3 Eisenberg: great science, solid and creative... and beautiful #ISMBECCB
359694310276464640 Jul 23 11:19 @ongenetics Eisenberg: structure of cystalin-derived fibers revealed out of register beta sheets and cylindrins. Laganowsky et al. 2012 #ISMBECCB
359694336390209536 Jul 23 11:19 @johnpharmd THIS MT @openscience @GigaScience:CG:we should b releasing data NOT pub'ing it. Follow software eng instead of libr processes #KN5 #ISMBECCB
359694667962523648 Jul 23 11:21 @Alfons_Valencia Eisenberg. Hypothesis experiments model and back. A refreshing lesson of scientific consistency to close #ISMBECCB
359694753123676160 Jul 23 11:21 @ISMBECCB @SahaSurya Thanks for following #ismbeccb tweets! See you in Boston for ISMB 2014!
359694989053272064 Jul 23 11:22 @larsjuhljensen RT @Alfons_Valencia: Eisenberg. Hypothesis experiments model and back. A refreshing lesson of scientific consistency to close #ISMBECCB
359695250773655553 Jul 23 11:23 @ongenetics Eisenberg: G93 in SOD1 was found by a cylindrin motif search and he now has crystals. #ALS #ISMBECCB
359695617779437570 Jul 23 11:24 @sciencestream RT @arneelof: "@Alfons_Valencia: Welcome Anna Tramontano. @Annatramontano3 A new twitter player converted during #ISMBECCB" you will always be young
359695630102310914 Jul 23 11:24 @sciencestream RT @Alfons_Valencia: Eisenberg now the cylindrin hypothesis. Small toxic oligomers. Experiments with crystalline. #ISMBECCB
359695652139171842 Jul 23 11:25 @sciencestream RT @arneelof: After 90 in register fibrill structure one our of register was found (toxic form?) #ismbeccb
359695679502811136 Jul 23 11:25 @sciencestream RT @Hoellenmotte: Upcoming: Snow out of the air con in Hall 1! ;-) #ismbeccb
359695788437286912 Jul 23 11:25 @reactome David Eisenberg says “don’t forget about metabolism” wrt personalized medicine. #ISMBECCB
359695937435734018 Jul 23 11:26 @arneelof Nice to see pictures of many old friends from my postdoc period #ismbeccb
359695945413296128 Jul 23 11:26 @ongenetics Eisenberg's inspiring talk has understated enthusiasm that some really terrible amyloid diseases are on their way to being cured. #ISMBECCB
359696026073960449 Jul 23 11:26 @arneelof RT @ongenetics: Eisenberg: G93 in SOD1 was found by a cylindrin motif search and he now has crystals. #ALS #ISMBECCB
359696105711218688 Jul 23 11:26 @yaydinson #ISMBECCB #KN6 DE "from sequence analysis combined with deeper understanding of metabolism:true #personalizedmedicine"
359696127173472256 Jul 23 11:26 @jonathancairns Eisenberg ends with exciting work on ALS (what Stephen Hawking has) & inspiring messages to nxt gen of comp bio students #ISMBECCB #KN6
359696199189659648 Jul 23 11:27 @i_am_kilpatrick Fascinating talk by ISCB Senior Scientist award winner David Eisenberg - great way to end #ISMBECCB meeting!
359696209541206016 Jul 23 11:27 @luispedrocoelho Goodbye #ISMBECCB. I hardly even knew ya...
359696424633516033 Jul 23 11:28 @yaydinson #ISMBECCB #KN6 DE warns "don't forget the metabolism" for true personalized medicine :D
359696425694670850 Jul 23 11:28 @AidanBudd Yep great ending MT @i_am_kilpatrick: Fascinating talk by ISCB Senior Scientist award winner D Eisenberg; great way 2 end #ISMBECCB meeting!
359696713440702466 Jul 23 11:29 @Chris_Evelo DE small changes in amino acid sequences lead to and prevent large symmetric changes in amyloid protein 3D structures #kn6 #ISMBECCB
359697933546950658 Jul 23 11:34 @log2ex Very inspiring talk by Eisenberg , true science . #ISMBECCB
359698159406026752 Jul 23 11:34 @laxvid RT @i_am_kilpatrick: Cool #OA badge from the nice folks at @PLOSCompBiol :) #ISMBECCB http://t.co/FwOjNJ3nX1
359698361034608643 Jul 23 11:35 @Alfons_Valencia RT @log2ex: Very inspiring talk by Eisenberg , true science . #ISMBECCB
359698386108166146 Jul 23 11:35 @yaydinson #ISMBECCB leaving ICC to catch our plane back to Ankara. To all on their way back home "Güle güle...."
359698427854065664 Jul 23 11:36 @Personal_Med RT @reactome: David Eisenberg says “don’t forget about metabolism” wrt personalized medicine. #ISMBECCB
359698431821873153 Jul 23 11:36 @Personal_Med RT @yaydinson: #ISMBECCB #KN6 DE warns "don't forget the metabolism" for true personalized medicine :D
359698483277611008 Jul 23 11:36 @rtraborn In response to a delegate's question Eisenberg quips: 'I think the hypothesis that honesty increases w/ age needs to be examined' #ismbeccb
359698825004335106 Jul 23 11:37 @Hoellenmotte RT @i_am_kilpatrick: Fascinating talk by ISCB Senior Scientist award winner David Eisenberg - great way to end #ISMBECCB meeting!
359699111781482497 Jul 23 11:38 @pjacock An #ISMBECCB 2013 Berlin tweet archive on GitHub - nice idea! RT @genetics_blog: @ISMBECCB @bffo @iddux https://github.com/stephenturner/twitterchive/blob/master/ismbeccb.txt
359699418745815040 Jul 23 11:39 @AidanBudd yes! MT @pjacock: #ISMBECCB 2013 Berlin GitHub tweet archive; nice idea! RT @genetics_blog: @ISMBECCB @bffo @iddux https://github.com/stephenturner/twitterchive/blob/master/ismbeccb.txt
359699563210223616 Jul 23 11:40 @Personal_Med RT @yaydinson: #ISMBECCB #KN6 DE "from sequence analysis combined with deeper understanding of metabolism:true #personalizedmedicine"
359699569245831169 Jul 23 11:40 @GigaScience Now for awards, @Alexbateman1 announcing winner of the 1st wikipedia competition: James Estevez for improving main Genomics page #ISMBECCB
359699637503918080 Jul 23 11:40 @ISMBECCB RCSB PDB Poster Prize goes to Matthias Dietzen from Max Planck Institute for Informatics. Congrats! #ismbeccb
359699984473530369 Jul 23 11:42 @AidanBudd always see "international cricket council" :) MT @yaydinson: #ISMBECCB leaving ICC 2 go back to Ankara. To all on their way home "Güle güle"
359700081122885634 Jul 23 11:42 @JonathanCFuller RT @AidanBudd: yes! MT @pjacock: #ISMBECCB 2013 Berlin GitHub tweet archive; nice idea! RT @genetics_blog: @ISMBECCB @bffo @iddux https://t.co/qGT7EWrWBZ
359700234936385536 Jul 23 11:43 @ISMBECCB Congrats to Allyson Byrd from Boston University for winning the 2013 Outstanding Poster Award #ismbeccb
359700569323081731 Jul 23 11:44 @ISMBECCB Best Paper in Translational Bioinformatics is a tie-Congrats to Russell Schwartz CMU & Nicola Bonzanni VU University Amsterdam #ismbeccb
359701409865805826 Jul 23 11:47 @ISMBECCB We are honored to announce the Ian Lawson Van Toch Memorial Award for Outstanding Student Paper goes to Wyatt Clark Indiana U. #ismbeccb
359701505038749699 Jul 23 11:48 @arneelof #gendercount at #ismbeccb awards 4/11 Good! (excuse potential errors)
359702027544166401 Jul 23 11:50 @ISMBECCB All of us at #ismbeccb and @ISCB thank our sponsors! http://bit.ly/14DevOH
359702173732450304 Jul 23 11:50 @arneelof Just a final dinner with friends and colleagues then back to my family. #ismbeccb
359702556563349505 Jul 23 11:52 @jonathancairns It's been an interesting and intense few days. Thankyou tweeps! See you next time. #ismbeccb
359702602390319104 Jul 23 11:52 @sciencestream RT @reactome: David Eisenberg says “don’t forget about metabolism” wrt personalized medicine. #ISMBECCB
359702629821059078 Jul 23 11:52 @sciencestream RT @arneelof: Nice to see pictures of many old friends from my postdoc period #ismbeccb
359702698284695553 Jul 23 11:53 @sciencestream RT @yaydinson: #ISMBECCB #KN6 DE "from sequence analysis combined with deeper understanding of metabolism:true #personalizedmedicine"
359702789951193088 Jul 23 11:53 @sciencestream RT @i_am_kilpatrick: Fascinating talk by ISCB Senior Scientist award winner David Eisenberg - great way to end #ISMBECCB meeting!
359702804669005825 Jul 23 11:53 @sciencestream RT @luispedrocoelho: Goodbye #ISMBECCB. I hardly even knew ya...
359702828320694272 Jul 23 11:53 @sciencestream RT @yaydinson: #ISMBECCB #KN6 DE warns "don't forget the metabolism" for true personalized medicine :D
359702865893269504 Jul 23 11:53 @GenomeAnalysis CONGRATULATIONS to Sergey for receiving the F1000 award for his poster!! Made @GenomeAnalysis very proud! #ISMBECCB http://t.co/0taQOrCVG8
359702908868116480 Jul 23 11:53 @sciencestream RT @log2ex: Very inspiring talk by Eisenberg , true science . #ISMBECCB
359702943051694080 Jul 23 11:53 @sciencestream RT @yaydinson: #ISMBECCB leaving ICC to catch our plane back to Ankara. To all on their way back home "Güle güle...."
359703024760930304 Jul 23 11:54 @nextgenseek #ismbeccb Missed ISMB 2013? Follow the tweets from @genetics_blog https://github.com/stephenturner/twitterchive/blob/master/ismbeccb.txt and published papers http://nextgenseek.com/2013/05/ismb-2013-announces-the-list-of-accepted-papers/
359703064216743937 Jul 23 11:54 @genetics_blog RT @nextgenseek: #ismbeccb Missed ISMB 2013? Follow the tweets from @genetics_blog https://github.com/stephenturner/twitterchive/blob/master/ismbeccb.txt and published papers http://t.co/w5N1Xb1Fre
359703166826196995 Jul 23 11:54 @anilthanki RT @GenomeAnalysis: CONGRATULATIONS to Sergey for receiving the F1000 award for his poster!! Made @GenomeAnalysis very proud! #ISMBECCB http://t.co/0taQOrCVG8
359703404110548993 Jul 23 11:55 @phospho3d RT @Alfons_Valencia: Welcome Anna Tramontano. @Annatramontano3 A new twitter player converted during #ISMBECCB
359703769614794752 Jul 23 11:57 @froggleston RT @GenomeAnalysis: CONGRATULATIONS to Sergey for receiving the F1000 award for his poster!! Made @GenomeAnalysis very proud! #ISMBECCB http://t.co/0taQOrCVG8
359704052247957505 Jul 23 11:58 @ogishima RT @pjacock: An #ISMBECCB 2013 Berlin tweet archive on GitHub - nice idea! RT @genetics_blog: @ISMBECCB @bffo @iddux https://github.com/stephenturner/twitterchive/blob/master/ismbeccb.txt
359704218724081665 Jul 23 11:59 @SahaSurya RT @nextgenseek: #ismbeccb Missed ISMB 2013? Follow the tweets from @genetics_blog https://github.com/stephenturner/twitterchive/blob/master/ismbeccb.txt and published papers http://t.co/w5N1Xb1Fre
359704283865812993 Jul 23 11:59 @ISMBECCB On behalf of #ismbeccb and @ISCB, thank you to all exhibitors! http://bit.ly/13YgyXv
359705035149565952 Jul 23 12:02 @GenomeAnalysis A very happy Sergey with his award! #ISMBECCB http://t.co/CoHznnjDZl
359705123343175680 Jul 23 12:02 @allysonlbyrd @wejlab We did it! RT: @ISMBECCB: Congrats to Allyson Byrd from Boston University for winning the 2013 Outstanding Poster Award #ismbeccb
359705842670501889 Jul 23 12:05 @pfanderson RT @GenomeBiology: #ismbeccb in future it may be possible to sequence genomes here on podium on USB key. for now there is no alternative for short reads - LP
359705903722790912 Jul 23 12:05 @pfanderson RT @bffo: GA: "Data is not understanding, unfortunately" & "Tools is not analysis, unfortunately" #ISMBECCB
359705931237433344 Jul 23 12:05 @pfanderson RT @moorejh: RT @ISMBECCB: Welcome to ISMB/ECCB 2013! The official hashtag is #ismbeccb. Check out the conference schedule http://t.co/FKTJdA0n4A.
359706019204562946 Jul 23 12:06 @pfanderson RT @bffo: BMC has removed the offensive banner from their booth! MT @larsjuhljensen: #OpenAccess: Do Not Enter #ISMBECCB http://t.co/2INHVSKkM7
359706159596314625 Jul 23 12:06 @mcaccamo RT @GenomeAnalysis: CONGRATULATIONS to Sergey for receiving the F1000 award for his poster!! Made @GenomeAnalysis very proud! #ISMBECCB http://t.co/0taQOrCVG8
359706210624208896 Jul 23 12:06 @ISMBECCB Congrats to @F1000 Poster Awardees Sergey Lamzin, Griet Laenen, Eric Franzosa, Thomas Abeel, and Hattice Bilur Engin! #ismbeccb
359706216383000578 Jul 23 12:06 @mcaccamo RT @GenomeAnalysis: A very happy Sergey with his award! #ISMBECCB http://t.co/CoHznnjDZl
359706309307801605 Jul 23 12:07 @EduEyras RT @GenomeBiology: #ISMBECCB better software = better research. Carole Goble discussing open data and reproducibility. http://t.co/IFGT0zay7F
359706572055789569 Jul 23 12:08 @pfanderson RT @nextgenseek: #ismbeccb Missed ISMB 2013? Follow the tweets from @genetics_blog https://github.com/stephenturner/twitterchive/blob/master/ismbeccb.txt and published papers http://t.co/w5N1Xb1Fre
359706598526042112 Jul 23 12:08 @ISMBECCB Awesome tweet archive! Thank you @genetics_blog and all #ismbeccb tweeps!!! https://github.com/stephenturner/twitterchive/blob/master/ismbeccb.txt
359707054774042627 Jul 23 12:10 @ISMBECCB A huge thank you to all #ismbeccb delegates! Looking forward to seeing you at ISMB 2014 in Boston July 11-15 https://www.iscb.org/ismb2014.
359707678605459456 Jul 23 12:12 @sciencestream RT @jonathancairns: It's been an interesting and intense few days. Thankyou tweeps! See you next time. #ismbeccb
359707682061565953 Jul 23 12:12 @sciencestream RT @GenomeAnalysis: CONGRATULATIONS to Sergey for receiving the F1000 award for his poster!! Made @GenomeAnalysis very proud! #ISMBECCB http://t.co/0taQOrCVG8
359707962132013058 Jul 23 12:13 @mcaccamo Sergey Lamzin (my student "yes I have to say this :)" ) was awarded the F100 poster prize at #ISMBECCB - Well done Sergey! @GenomeAnalysis
359708257725583361 Jul 23 12:15 @anilthanki RT @GenomeAnalysis: A very happy Sergey with his award! #ISMBECCB http://t.co/CoHznnjDZl
359708304152338432 Jul 23 12:15 @bffo Gr8 conference all, thank u 4 the tweets, & hope 2 c u all in Boston 4 #ISMB2014 , if I don't read u or c u b4 #ISMBECCB
359708423509655552 Jul 23 12:15 @bioinfosm includes Groupon and scissors! MT @nextgenseek #ismbeccb http://nextgenseek.com/2013/05/ismb-2013-announces-the-list-of-accepted-papers/ tweets @genetics_blog https://github.com/stephenturner/twitterchive/blob/master/ismbeccb.txt #genomics #NGS
359709753695416320 Jul 23 12:21 @bffo .@iscb needs 2 include variants of http://t.co/AxXXppAMIO in conference bag so we all have it 4 1st KN01 in #ISMB2014 #ISMBbingo #ISMBECCB
359709836600033280 Jul 23 12:21 @marc_rr RT @nextgenseek: #ismbeccb Missed ISMB 2013? Follow the tweets from @genetics_blog https://github.com/stephenturner/twitterchive/blob/master/ismbeccb.txt and published papers http://t.co/w5N1Xb1Fre
359709985732694017 Jul 23 12:21 @marc_rr Thanks to all who tweeted #ISMBECCB!
359710409332236288 Jul 23 12:23 @GenomeAnalysis RT @mcaccamo: Sergey Lamzin (my student "yes I have to say this :)" ) was awarded the F100 poster prize at #ISMBECCB - Well done Sergey! @GenomeAnalysis
359711031645319169 Jul 23 12:26 @VickySchneiderG RT @GenomeAnalysis: CONGRATULATIONS to Sergey for receiving the F1000 award for his poster!! Made @GenomeAnalysis very proud! #ISMBECCB http://t.co/0taQOrCVG8
359713578162470912 Jul 23 12:36 @pedrobeltrao It was great to see familiar faces and meet new people at #ISMBECCB it was a good scientific overview but not the best for cozy discussions
359713858996277250 Jul 23 12:37 @sciencestream RT @mcaccamo: Sergey Lamzin (my student "yes I have to say this :)" ) was awarded the F100 poster prize at #ISMBECCB - Well done Sergey! @GenomeAnalysis
359713862297202689 Jul 23 12:37 @sciencestream RT @bffo: Gr8 conference all, thank u 4 the tweets, & hope 2 c u all in Boston 4 #ISMB2014 , if I don't read u or c u b4 #ISMBECCB
359713867422646274 Jul 23 12:37 @sciencestream RT @bioinfosm: includes Groupon and scissors! MT @nextgenseek #ismbeccb http://nextgenseek.com/2013/05/ismb-2013-announces-the-list-of-accepted-papers/ tweets @genetics_blog https://t.co/S18L76P7FP #genomics #NGS
359715692905373700 Jul 23 12:44 @CLCbio @baym Since 2008 we have handed out 4-500 t-shirts every year at ISMB - and they're almost always gone in a few hours! #ismbeccb
359718606252158976 Jul 23 12:56 @WonderMixTape RT @bffo: Gr8 conference all, thank u 4 the tweets, & hope 2 c u all in Boston 4 #ISMB2014 , if I don't read u or c u b4 #ISMBECCB
359718648862081025 Jul 23 12:56 @WonderMixTape RT @ISMBECCB: A huge thank you to all #ismbeccb delegates! Looking forward to seeing you at ISMB 2014 in Boston July 11-15 https://t.co/EAIUpclToq.
359718708379258880 Jul 23 12:56 @AidanBudd +1 chatting with them is a big part of the fun MT @ISMBECCB: On behalf of #ismbeccb & @ISCB thanks 2 all exhibitors! http://bit.ly/13YgyXv
359719043407691779 Jul 23 12:57 @jonathancairns RT @ISMBECCB: Awesome tweet archive! Thank you @genetics_blog and all #ismbeccb tweeps!!! https://github.com/stephenturner/twitterchive/blob/master/ismbeccb.txt
359719491787173888 Jul 23 12:59 @AidanBudd A pleasure :) first "big" tweeting event for me, and made it lots more fun RT @marc_rr: Thanks to all who tweeted #ISMBECCB!
359720561305333761 Jul 23 13:03 @sciencestream RT @AidanBudd: +1 chatting with them is a big part of the fun MT @ISMBECCB: On behalf of #ismbeccb & @ISCB thanks 2 all exhibitors! http://t.co/3mAt6gS2Yr
359720597447651330 Jul 23 13:04 @sciencestream RT @AidanBudd: A pleasure :) first "big" tweeting event for me, and made it lots more fun RT @marc_rr: Thanks to all who tweeted #ISMBECCB!
359723709596057602 Jul 23 13:16 @suganthibala RT @ISMBECCB: Awesome tweet archive! Thank you @genetics_blog and all #ismbeccb tweeps!!! https://github.com/stephenturner/twitterchive/blob/master/ismbeccb.txt
359724426532634624 Jul 23 13:19 @anitawaard Just uplioaded my #ISMBECCB Bioontologies keynote: Why Life is Difficult, And What We Can Do About It. http://slidesha.re/1bJLELv
359724957980299264 Jul 23 13:21 @amrojasmendoza RT @log2ex: Very inspiring talk by Eisenberg , true science . #ISMBECCB
359724982319845376 Jul 23 13:21 @F1000Tips @iysik_com Many journals do not view @F1000Posters deposition as prior publication. See the full list at http://f1000.com/posters/journalresponses #ISMBECCB
359725301531557890 Jul 23 13:22 @anitawaard Well, #ISMBECCB was certainly fun... Thanks @ProfLHunter, @JudyBlake, @MichaelSchroeder AMO for good times! O and a good program, of course.
359725713462538240 Jul 23 13:24 @sciencestream RT @anitawaard: Just uplioaded my #ISMBECCB Bioontologies keynote: Why Life is Difficult, And What We Can Do About It. http://t.co/R5MOtBUnFi
359725743061729280 Jul 23 13:24 @sciencestream RT @anitawaard: Well, #ISMBECCB was certainly fun... Thanks @ProfLHunter, @JudyBlake, @MichaelSchroeder AMO for good times! O and a good program, of course.
359726649706680320 Jul 23 13:28 @KamounLab RT @mcaccamo: Sergey Lamzin (my student "yes I have to say this :)" ) was awarded the F100 poster prize at #ISMBECCB - Well done Sergey! @GenomeAnalysis
359728120787501056 Jul 23 13:34 @Genome10K RT @GigaScience: CG on importance of sharing systems: 80% of workflows are made from adapting other peoples workflows #ISMBECCB #KN5
359731127113621506 Jul 23 13:45 @renelaennec RT @Alexbateman1: Here is the announcement for the 2013 ISCB #Wikipedia competition http://en.wikipedia.org/wiki/Wikipedia:WikiProject_Computational_Biology/ISCB_competition_announcement_2013 #ISMBECCB
359738390071099392 Jul 23 14:14 @vanessavph RT @emblebi: Looking forward to Janet Thornton and Niklas Blomberg's Introduction to Elixir. 2.10pm #SS06 #ISMBECCB
359739488458653697 Jul 23 14:19 @abeldavidgp RT @pedrobeltrao: The gender unbalance stands out in the list of senior scientists award #ISMBECCB
359747296226844672 Jul 23 14:50 @wejlab @allysonlbyrd @ISMBECCB congrats on your poster! This is wonderful news and well earned! Nice work! #ISMBECCB
359748139705573376 Jul 23 14:53 @sciencestream RT @wejlab: @allysonlbyrd @ISMBECCB congrats on your poster! This is wonderful news and well earned! Nice work! #ISMBECCB
359749334604062720 Jul 23 14:58 @wejlab @allysonlbyrd @BUbioinfo @BUMedicine @ISMBECCB congrats to Allyson for her best poster award on her Clinical Pathoscope work at #ISMBECCB!
359749738096099328 Jul 23 14:59 @joyclee RT @bffo: GA: "Data is not understanding, unfortunately" & "Tools is not analysis, unfortunately" #ISMBECCB
359755433612812288 Jul 23 15:22 @colindaven RT @pedrobeltrao: The gender unbalance stands out in the list of senior scientists award #ISMBECCB
359755512402812928 Jul 23 15:22 @EvoMRI RT @Alexbateman1: Here is the announcement for the 2013 ISCB #Wikipedia competition http://en.wikipedia.org/wiki/Wikipedia:WikiProject_Computational_Biology/ISCB_competition_announcement_2013 #ISMBECCB
359757111594455040 Jul 23 15:29 @generalising RT @Alexbateman1: Here is the announcement for the 2013 ISCB #Wikipedia competition http://en.wikipedia.org/wiki/Wikipedia:WikiProject_Computational_Biology/ISCB_competition_announcement_2013 #ISMBECCB
359761278207672321 Jul 23 15:45 @MMMarksman RT @GenomeAnalysis: CONGRATULATIONS to Sergey for receiving the F1000 award for his poster!! Made @GenomeAnalysis very proud! #ISMBECCB http://t.co/0taQOrCVG8
359762560683216897 Jul 23 15:50 @anitawaard RT @pedrobeltrao: 'The gender inbalance...' Indeed- but if it's still there for junior scientist awards, we really need to worry! #ISMBECCB
359767548394356736 Jul 23 16:10 @cazencott A very good edition of #ISMBECCB as far as I am concerned. Thanks all for the great conversation… and the positive feedback on my work :-)
359768054890110977 Jul 23 16:12 @sciencestream RT @cazencott: A very good edition of #ISMBECCB as far as I am concerned. Thanks all for the great conversation… and the positive feedback on my work :-)
359775498521415682 Jul 23 16:42 @torstenseemann RT @d_r_powell: I know what I want for next #ISMBECCB, a web-app to select presentations from the schedule and will produce me an individualised schedule
359776499492065282 Jul 23 16:46 @ErichMSchwarz RT @Hoellenmotte: David Eisenberg on evolution of PPIs: "I wasn't puzzled enough to become a creationist..." #ISMBECCB #kn6
359782827765678081 Jul 23 17:11 @mcaccamo RT @GenomeBiology: #ISMBECCB better software = better research. Carole Goble discussing open data and reproducibility. http://t.co/IFGT0zay7F
359785745520660481 Jul 23 17:23 @EvoMRI RT @pjacock: An #ISMBECCB 2013 Berlin tweet archive on GitHub - nice idea! RT @genetics_blog: @ISMBECCB @bffo @iddux https://github.com/stephenturner/twitterchive/blob/master/ismbeccb.txt
359790627573080066 Jul 23 17:42 @jonathancairns Like a child on Christmas eve, I couldn't help but peek at @genetics_blog 's #ISMBECCB tweet analysis in advance...
359791680465027075 Jul 23 17:46 @sciencestream RT @jonathancairns: Like a child on Christmas eve, I couldn't help but peek at @genetics_blog 's #ISMBECCB tweet analysis in advance...
359791879484747776 Jul 23 17:47 @CharityGWo Another free t shirt, some sweets, pens, and a mouse pad. Good haul. #ISMBECCB
359792805243125761 Jul 23 17:51 @cathbrooksbank Thanks to all my #ISMBECCB friends for all the follows and RTs. Just landed at Stansted.
359792993496088576 Jul 23 17:51 @frank_foerster #ISMBECCB Finally I arrived home. It was a really nice conference in #Berlin, Germany Thanks to all the organizers!
359793616836767744 Jul 23 17:54 @bffo with a maped escalator-by-escalator directions! MT @d_r_powell: #ISMBECCB, a web-app to select presentations from the schedule
359795074483228672 Jul 23 18:00 @sciencestream RT @cathbrooksbank: Thanks to all my #ISMBECCB friends for all the follows and RTs. Just landed at Stansted.
359795078438469633 Jul 23 18:00 @sciencestream RT @frank_foerster: #ISMBECCB Finally I arrived home. It was a really nice conference in #Berlin, Germany Thanks to all the organizers!
359795081684856832 Jul 23 18:00 @sciencestream RT @bffo: with a maped escalator-by-escalator directions! MT @d_r_powell: #ISMBECCB, a web-app to select presentations from the schedule
359798751172370432 Jul 23 18:14 @Jeggog RT @d_r_powell: I know what I want for next #ISMBECCB, a web-app to select presentations from the schedule and will produce me an individualised schedule
359800199494905856 Jul 23 18:20 @BlueSEQ RT @iddux: Software and data are as free as puppies: you still have to invest in a "free puppy": walk & feed it. @CaroleAnneGoble #ISMBECCB
359801207742672896 Jul 23 18:24 @DNADigest RT @bffo: .@CaroleAnneGoble provides some definitions 2 reproducibility #ismbeccb http://t.co/6wxIlmfYvP
359804004114501633 Jul 23 18:35 @amrojasmendoza RT @nextgenseek: #ismbeccb Missed ISMB 2013? Follow the tweets from @genetics_blog https://github.com/stephenturner/twitterchive/blob/master/ismbeccb.txt and published papers http://t.co/w5N1Xb1Fre
359804217139011585 Jul 23 18:36 @WonderMixTape RT @tehancocks: Barcelona Supercomputing Centre - beautiful juxtaposition of modern tech and medieval architecture #ISMBECCB http://t.co/bbarWGvir4
359804537973903360 Jul 23 18:37 @bffo RT @ISMBECCB: Awesome tweet archive! Thank you @genetics_blog and all #ismbeccb tweeps!!! https://github.com/stephenturner/twitterchive/blob/master/ismbeccb.txt
359804834209218563 Jul 23 18:38 @neilfws RT @ISMBECCB: Awesome tweet archive! Thank you @genetics_blog and all #ismbeccb tweeps!!! https://github.com/stephenturner/twitterchive/blob/master/ismbeccb.txt
359811949548150784 Jul 23 19:07 @salitabacchi_ Another free t shirt, some sweets, pens, and a mouse pad. Good haul. #ISMBECCB
359812391967522816 Jul 23 19:08 @tjvision RT @Alexbateman1: Here is the announcement for the 2013 ISCB #Wikipedia competition http://en.wikipedia.org/wiki/Wikipedia:WikiProject_Computational_Biology/ISCB_competition_announcement_2013 #ISMBECCB
359919475920879617 Jul 24 02:14 @CuencaM RT @girlscientist: Wow they seem a little harsher than @konrad_jk's! “@bffo: #ISMBbingo card http://t.co/7duI6nchim #ISMBECCB via @jonathancairns”
359920635411042304 Jul 24 02:19 @Boycealan_ Another free t shirt, some sweets, pens, and a mouse pad. Good haul. #ISMBECCB
359931936292093953 Jul 24 03:03 @ppgardne RT @Alexbateman1: Here is the announcement for the 2013 ISCB #Wikipedia competition http://en.wikipedia.org/wiki/Wikipedia:WikiProject_Computational_Biology/ISCB_competition_announcement_2013 #ISMBECCB
359932311661318144 Jul 24 03:05 @ppgardne RT @GigaScience: Phil Bourne on what needs fixing in the research cycle #wk3 #ismbeccb http://t.co/eO3PiaaA0P
359933759363088384 Jul 24 03:11 @AleksiKallio @tehancocks I did appreciate #Escherlators for their artistic achievement, but not really for getting me where I wanted to go. #ISMBECCB
359938567100841984 Jul 24 03:30 @F1000Posters @RomainStuder posters are embargoed until a conference ends... but now its all over your work is now live! http://f1000.com/posters/browse/summary/1093856 #ISMBECCB
359940935238418432 Jul 24 03:39 @darrenlogan RT @Alexbateman1: Here is the announcement for the 2013 ISCB #Wikipedia competition http://en.wikipedia.org/wiki/Wikipedia:WikiProject_Computational_Biology/ISCB_competition_announcement_2013 #ISMBECCB
359941685683294209 Jul 24 03:42 @simon_andrews Resolution from #ISMBECCB 1: Expand and complete the reproducible research extensions in SeqMonk and have these in the next release.
359942047517515777 Jul 24 03:44 @simon_andrews Resolution from #ISMBECCB 2: Submit one of our software packages to @F1000research as part of their software publishing promotion.
359942253906640897 Jul 24 03:44 @simon_andrews Resolution from #ISMBECCB 3: Install and try out xxMotif http://xxmotif.genzentrum.lmu.de/
359943143577231361 Jul 24 03:48 @sciencestream RT @simon_andrews: Resolution from #ISMBECCB 1: Expand and complete the reproducible research extensions in SeqMonk and have these in the next release.
359943158869671938 Jul 24 03:48 @sciencestream RT @simon_andrews: Resolution from #ISMBECCB 2: Submit one of our software packages to @F1000research as part of their software publishing promotion.
359943173423890433 Jul 24 03:48 @sciencestream RT @simon_andrews: Resolution from #ISMBECCB 3: Install and try out xxMotif http://xxmotif.genzentrum.lmu.de/
359951097365938180 Jul 24 04:20 @F1000Posters @TGACBrowser @GenomeAnalysis the TGAC Browser poster that was presented at #ISMBECCB is now live on F1000Posters: http://f1000.com/posters/browse/summary/1093859
359951949975666688 Jul 24 04:23 @GenomeAnalysis RT @F1000Posters: @TGACBrowser @GenomeAnalysis the TGAC Browser poster that was presented at #ISMBECCB is now live on F1000Posters: http://t.co/MizIXtMN9n
359953709926584320 Jul 24 04:30 @anilthanki RT @F1000Posters: @TGACBrowser @GenomeAnalysis the TGAC Browser poster that was presented at #ISMBECCB is now live on F1000Posters: http://t.co/MizIXtMN9n
359954058250948608 Jul 24 04:31 @AidanBudd #ISMBECCB leaving Berlin by train towards Hannover? since June 21st timetable has changed my train left 45 early http://www.bahn.com/i/view/GBR/en/flooding_in_austria_and_germany.shtml
359954346349309952 Jul 24 04:32 @sciencestream RT @F1000Posters: @TGACBrowser @GenomeAnalysis the TGAC Browser poster that was presented at #ISMBECCB is now live on F1000Posters: http://t.co/MizIXtMN9n
359954379874381824 Jul 24 04:33 @sciencestream RT @AidanBudd: #ISMBECCB leaving Berlin by train towards Hannover? since June 21st timetable has changed my train left 45 early http://t.co/mDDOp7JZge
359954931341467650 Jul 24 04:35 @AidanBudd #ISMBECCB booked ticket after June 21st u have right times But no problem changing ticket/reservation Thanks 4 the friendly service @DB_Bahn
359955986636746753 Jul 24 04:39 @AidanBudd #ISMBECCB note also there's free wifi outside the starbucks at Berlin Hbf - valuable commodity in this city!
359956541538967552 Jul 24 04:41 @SelinKaragulle My first #ISMBECCB conference was very informative and inspiring. See you at next #ISMB conference!
359956976123396097 Jul 24 04:43 @sciencestream RT @AidanBudd: #ISMBECCB booked ticket after June 21st u have right times But no problem changing ticket/reservation Thanks 4 the friendly service @DB_Bahn
359956990539210752 Jul 24 04:43 @sciencestream RT @AidanBudd: #ISMBECCB note also there's free wifi outside the starbucks at Berlin Hbf - valuable commodity in this city!
359957003629637632 Jul 24 04:43 @sciencestream RT @SelinKaragulle: My first #ISMBECCB conference was very informative and inspiring. See you at next #ISMB conference!
359957103894466560 Jul 24 04:43 @SelinKaragulle RT @ISMBECCB: Awesome tweet archive! Thank you @genetics_blog and all #ismbeccb tweeps!!! https://github.com/stephenturner/twitterchive/blob/master/ismbeccb.txt
359969314608123904 Jul 24 05:32 @RomainStuder Back to work. It was really nice to see you all. A great meeting. See you next year in Strasbourg for #ECCB14 ! #ISMBECCB
359970085059829760 Jul 24 05:35 @RomainStuder @F1000Posters Great, thank you! #ISMBECCB
359970683079503872 Jul 24 05:37 @RomainStuder Poster on "Identify discriminating features to predict functional sites in enzyme structures" at http://f1000.com/posters/browse/summary/1093856 #ISMBECCB #AFP13
359971195153694723 Jul 24 05:39 @sciencestream RT @RomainStuder: Back to work. It was really nice to see you all. A great meeting. See you next year in Strasbourg for #ECCB14 ! #ISMBECCB
359971197489917952 Jul 24 05:39 @sciencestream RT @RomainStuder: @F1000Posters Great, thank you! #ISMBECCB
359972696521588736 Jul 24 05:45 @GenomeAnalysis Thank you for a great conference! RT @ISMBECCB: "On behalf of #ismbeccb and @ISCB, thank you to all exhibitors! http://bit.ly/13YgyXv"
359974458590638080 Jul 24 05:52 @sciencestream RT @GenomeAnalysis: Thank you for a great conference! RT @ISMBECCB: "On behalf of #ismbeccb and @ISCB, thank you to all exhibitors! http://t.co/1nhQ0qlHhw"
359980793336045568 Jul 24 06:18 @LamzinS @mcaccamo @VickySchneiderG and everyone else. Thank you very much for your support! I am proud to represent @GenomeAnalysis at #ISMBECCB
359983599874883585 Jul 24 06:29 @tehancocks @AleksiKallio - I agree! Strange building with very bad signage. Access to Hall 1 was not great either.#ISMBECCB
359985103499304960 Jul 24 06:35 @sciencestream RT @tehancocks: @AleksiKallio - I agree! Strange building with very bad signage. Access to Hall 1 was not great either.#ISMBECCB
359986480904548353 Jul 24 06:40 @F1000Research RT @simon_andrews: Resolution from #ISMBECCB 2: Submit one of our software packages to @F1000research as part of their software publishing promotion.
359986873046810625 Jul 24 06:42 @McDawg RT @simon_andrews: Resolution from #ISMBECCB 2: Submit one of our software packages to @F1000research as part of their software publishing promotion.
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