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I needed the ability to use the # operator on arrays passed down from Java. It's a pretty simple change, and I've tested it and it works.
I also needed LuaObject.finalize() to not block on synchronized(L).
As a bonus, I hate seeing warnings, so I found the GCC pragma that asks it to ignore the warnings in question, as well as cleaning up the warnings in LuaObject.
I also have extensions allowing LuaJava to access LuaJIT's FFI. Let me know if you're interested in adding that; FFI is awesome, and works on Android to pull in and link with .so files (as well as standard C library functions, of course -- I got rid of several calls into Java entirely by using FFI calls into C libraries, which is just all kinds of faster).
--Tim