CRAN release v8.0.0
This release of SimInf includes improvements and changes to facilitate
post-processing of trajectory data and future development of the
package.
IMPROVEMENTS
-
Added the 'compartments' and 'index' arguments to the 'boxplot' and
'pairs' plotting methods to facilitate analysis of a simulated
trajectory, see the documentation. -
The build configuration script has been improved to identify if
OpenMP can be used. It is also possible to skip the check for OpenMP
if --disable-openmp is specified when installing the package.
BREAKING CHANGES
Backwards incompatible changes that are the reason why the major
version has been incremented.
-
The 'prevalence' function was changed to an S4 method. Moreover, the
'type' character argument was renamed to 'level' and changed to an
integer argument. The reason for renaming the 'type' argument was to
prepare for improvements in the plot function in the future to
display the prevalence but where there is already an argument called
'type'. Additionally, the 'as.is' argument was renamed to 'format'
for clarity. Finally, the unused '...' argument was removed. See the
documentation for examples. -
The 'trajectory' function was changed to an S4 method. Furthermore,
the node index argument was renamed from 'node' to 'index' to
facilitate future development where indices can also represent other
structures in a model. Additionally, the 'as.is' argument was
renamed to 'format' for clarity. Finally, the unused '...' argument
was removed. See the documentation for examples. -
The 'Nn' function to determine the number of nodes in a model has
been replaced with the S4 method 'n_nodes'.