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St. Jude Children's Research Hospital

Finding Cures, Saving Children.

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  1. learngenomics.dev learngenomics.dev Public

    A guided, intuitive introduction to genomics for software engineers. Curated by the community.

    JavaScript 343 29

  2. ROSE ROSE Public

    ROSE: RANK ORDERING OF SUPER-ENHANCERS

    Python 37 12

  3. CICERO CICERO Public

    CICERO: a versatile method for detecting complex and diverse driver fusions using cancer RNA sequencing data.

    Perl 35 20

  4. ChIPseqSpikeInFree ChIPseqSpikeInFree Public

    A Spike-in Free ChIP-Seq Normalization Approach for Detecting Global Changes in Histone Modifications

    R 29 13

  5. RNAIndel RNAIndel Public

    Somatic indel discovery tool for tumor RNA-Seq data.

    Python 21 9

  6. cis-x cis-x Public

    Search for activating regulatory variants in the tumor genome

    Perl 14 8

Repositories

3 results for all repositories written in Perl sorted by last updated
Showing 3 of 3 repositories
  • CICERO Public

    CICERO: a versatile method for detecting complex and diverse driver fusions using cancer RNA sequencing data.

    stjude/CICERO’s past year of commit activity
    Perl 35 20 7 0 Updated Jan 24, 2024
  • RNApeg Public

    RNA junction finder

    stjude/RNApeg’s past year of commit activity
    Perl 3 Apache-2.0 2 1 0 Updated Jun 2, 2023
  • cis-x Public

    Search for activating regulatory variants in the tumor genome

    stjude/cis-x’s past year of commit activity
    Perl 14 Apache-2.0 8 6 0 Updated Jan 27, 2021