GitHub is home to over 31 million developers working together. Join them to grow your own development teams, manage permissions, and collaborate on projects.
Technical documentation for the St. Jude Cloud
Application to securely upload data to and download data from St. Jude Cloud Platform.
Find and quantify COSMIC mutational signatures across samples
Application tutorials for St. Jude Cloud.
Somatic indel discovery tool for tumor RNA-Seq data.
Library for manipulating Illumina generated FastQ files
Compute telomeric read fractions in a BAM file.
Fuzzy fusion finder for next generation sequencing data.
Constuct Extrachromosomal Circular DNA using Whole Genome Sequencing Data
Code accompanying the publication "The neoepitope landscape in pediatric cancers"
Trident executable source code and tools
Data mining and analysis of GPFS client metrics.
Software for managing HPC infrastructure via LSF
Trident web source code and tools
Provides user-level validation and assimilation routines for BOINC projects.
R package for accessing explore.pediatriccancergenomeproject.org data programatically through R