surface rendering with ants
Shell Python
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ADNI_137_S_0158_MR_MPR__GradWarp__N3__Scaled_Br_20070306171702344_S20209_I42985BrainSegmentation.nii.gz
ADNI_137_S_0158_MR_MPR__GradWarp__N3__Scaled_Br_20070306171702344_S20209_I42985CorticalThickness.nii.gz
GenerateBrainMesh.sh
GenerateBrainMesh2.sh
GenerateBrainMesh3.sh
README.Rmd
antsSurfEx1.png
antsSurfEx2.png
blob.nii.gz
brainSurf2.stl
brainSurface.stl
totter.nii.gz
tvtk_render.py

README.Rmd

antsSurf

surface rendering with ants

 antsSurf -s [ wmt.nii.gz,255x255x255]  -d 0  -o brainSurface.stl

but also see

bash GenerateBrainMesh.sh

Example 1: Just a surface

basic

Example 2: Surface plus overlay plus rotation

basic