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[release-2.9] Upgrade to thanos 0.32.3 #84

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  • I added CHANGELOG entry for this change.
  • Change is not relevant to the end user.

Changes

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junotx and others added 30 commits April 13, 2023 10:51
Signed-off-by: junot <junotxiang@kubesphere.io>
* Query: Switch engines using `engine` param

Thanos query has two engine, prometheus (default) and thanos.
A single engine runs through thanos query command at a time, and
have to re run the command to switch between.

This commit adds a functionality to run multiple engines at once
and switch between them using `engine` query param inq query api.

To avoid duplicate matrics registration, the thanos engine is
provided with a different registerer having prefix `tpe_` (not
been finalized yet).

promql-engine command line flag has been removed that specifies
the query engine to run.

Currently this functionality not implemented on GRPCAPI.

Signed-off-by: Pradyumna Krishna <git@onpy.in>

* Add multiple engine support to GRPCAPI

Fix build fail for thanos, adds support for multiple engine in
GRPCAPI.

Signed-off-by: Pradyumna Krishna <git@onpy.in>

* Create QueryEngineFactory to create engines

QueryEngineFactory makes a collection for all promql engines used
by thanos and returns it. Any engine can be created and returned
using `GetXEngine` method.

It is currently limited to 2 engines prometheus and thanos engines
that get created on the first call.

Signed-off-by: Pradyumna Krishna <git@onpy.in>

* Use QueryEngineFactory in query API

thanos query commands pass `QueryEngineFactory` to query apis
that will use engine based on query params. It will provide more
flexibility to create multiple engines in thanos.

Adds `defaultEngine` CLI flag, A default engine to use if not
specified with query params.

Signed-off-by: Pradyumna Krishna <git@onpy.in>

* Update Query API tests

Fixes breaking tests

Signed-off-by: Pradyumna Krishna <git@onpy.in>

* Minor changes and Docs fixes

* Move defaultEngine argument to reduce diff.
* Generated Docs.

Signed-off-by: Pradyumna Krishna <git@onpy.in>

* Add Engine Selector/ Dropdown to Query UI

Engine Selector is a dropdown that sets an engine to be used to
run the query. Currently two engines `thanos` and `prometheus`.

This dropdown sends a query param `engine` to query api, which
runs the api using the engine provided. Provided to run query
using multiple query engines from Query UI.

Signed-off-by: Pradyumna Krishna <git@onpy.in>

* Move Engine Selector to Panel

Removes Dropdown component, and renders Engine Selector directly.
Receives defaultEngine from `flags` API.
Updates parseOptions to parse engine query param and updates test
for Panel and utils.

Signed-off-by: Pradyumna Krishna <git@onpy.in>

* Upgrade promql-engine dependency

Updates promql-engine that brings functionality to provide
fallback engine using enigne Opts.

Signed-off-by: Pradyumna Krishna <git@onpy.in>

* Add MinT to remote client

MinT method was missing from Client due to updated promql-engine.
This commits adds mint to the remote client.

Signed-off-by: Pradyumna Krishna <git@onpy.in>

* Use prometheus fallback engine in thanos engine

Thanos engine creates a fallback prometheus engine that conflicts
with another prometheus engine created by thanos, while
registering metrics. To fix this, provided created thanos engine
as fallback engine to thanos engine in engine Opts.

Signed-off-by: Pradyumna Krishna <git@onpy.in>

* Use enum for EngineType in GRPC

GRPC is used for communication between thanos components and
defaultEngine was a string before. Enum makes more sense, and
hence the request.Enigne type has been changed to
querypb.EngineType.
Default case is handled with another default value provided in
the enum.

Signed-off-by: Pradyumna Krishna <git@onpy.in>

* Update query UI bindata.go

Compile react app using `make assets`.

Signed-off-by: Pradyumna Krishna <git@onpy.in>

---------

Signed-off-by: Pradyumna Krishna <git@onpy.in>
Signed-off-by: Etienne Martel <etienne.martel.7@gmail.com>
Signed-off-by: GitHub <noreply@github.com>
Co-authored-by: fpetkovski <fpetkovski@users.noreply.github.com>
…s-io#6287)

* Upgrade prometheus to 7309ac272195cb856b879306d6a27af7641d3346

Signed-off-by: Alex Le <leqiyue@amazon.com>

* Reverted test code

Signed-off-by: Alex Le <leqiyue@amazon.com>

* Updated comment

Signed-off-by: Alex Le <leqiyue@amazon.com>

* docs: mismatch in changelog

Signed-off-by: Etienne Martel <etienne.martel.7@gmail.com>
Signed-off-by: Alex Le <leqiyue@amazon.com>

* Updates busybox SHA (thanos-io#6283)

Signed-off-by: GitHub <noreply@github.com>
Co-authored-by: fpetkovski <fpetkovski@users.noreply.github.com>
Signed-off-by: Alex Le <leqiyue@amazon.com>

* trigger workflow

Signed-off-by: Alex Le <leqiyue@amazon.com>

* trigger workflow

Signed-off-by: Alex Le <leqiyue@amazon.com>

---------

Signed-off-by: Alex Le <leqiyue@amazon.com>
Signed-off-by: Etienne Martel <etienne.martel.7@gmail.com>
Signed-off-by: GitHub <noreply@github.com>
Co-authored-by: Etienne Martel <etienne.martel.7@gmail.com>
Co-authored-by: github-actions[bot] <41898282+github-actions[bot]@users.noreply.github.com>
Co-authored-by: fpetkovski <fpetkovski@users.noreply.github.com>
Signed-off-by: naveadkazi <navead@carwale.com>
Add CarTrade Tech as new adopter
Signed-off-by: Walther Lee <walthere.lee@gmail.com>
Signed-off-by: Walther Lee <walthere.lee@gmail.com>
* Remove custom Between test matcher

The upstream PR to efficientgo/e2e has been merged, so we can use  it from there.

Signed-off-by: Douglas Camata <159076+douglascamata@users.noreply.github.com>

* Run go mod tidy

Signed-off-by: Douglas Camata <159076+douglascamata@users.noreply.github.com>

---------

Signed-off-by: Douglas Camata <159076+douglascamata@users.noreply.github.com>
Signed-off-by: Walther Lee <walthere.lee@gmail.com>
Signed-off-by: Walther Lee <walthere.lee@gmail.com>
Signed-off-by: Walther Lee <walthere.lee@gmail.com>
* Implemented native histogram support for qfe and query UI

Signed-off-by: Sebastian Rabenhorst <sebastian.rabenhorst@shopify.com>

Fixed marshalling for histograms in qfe

Started working on native histogram query ui

Copied histogram implementation for graph

Added query range support for native histograms in qfe

Use prom model (un-)marshal for native histograms in qfe

Use prom model (un-)marshal for native histograms in qfe

Fixed sample and sample stream marshal fn

Extended qfe native histogram e2e tests

Added copyright to qfe queryrange compat

Added query range test fo histograms and try to fix ui tests

Fixed DataTable test

Review feedback

Fixed native histogram e2e test

Signed-off-by: Sebastian Rabenhorst <sebastian.rabenhorst@shopify.com>

Add histogram support for ApplyCounterResetsSeriesIterator

Signed-off-by: Sebastian Rabenhorst <sebastian.rabenhorst@shopify.com>

Made assets

Signed-off-by: Sebastian Rabenhorst <sebastian.rabenhorst@shopify.com>

Add chnagelog

Signed-off-by: Sebastian Rabenhorst <sebastian.rabenhorst@shopify.com>

Fixed changelog

Signed-off-by: Sebastian Rabenhorst <sebastian.rabenhorst@shopify.com>

Fixed qfe

Signed-off-by: Sebastian Rabenhorst <sebastian.rabenhorst@shopify.com>

Fixed PrometheusResponse minTime for histograms in qfe

Signed-off-by: Sebastian Rabenhorst <sebastian.rabenhorst@shopify.com>

Updated prometheus common to v0.40.0 and queryrange.Sample fixes

Signed-off-by: Sebastian Rabenhorst <sebastian.rabenhorst@shopify.com>

Updated Readme

Signed-off-by: Sebastian Rabenhorst <sebastian.rabenhorst@shopify.com>

Addressed PR comments

Signed-off-by: Sebastian Rabenhorst <sebastian.rabenhorst@shopify.com>

trigger tests

Signed-off-by: Sebastian Rabenhorst <sebastian.rabenhorst@shopify.com>

Made assets

Signed-off-by: Sebastian Rabenhorst <sebastian.rabenhorst@shopify.com>

* Made assets

Signed-off-by: Sebastian Rabenhorst <sebastian.rabenhorst@shopify.com>

* fixed tsdbutil references

Signed-off-by: Sebastian Rabenhorst <sebastian.rabenhorst@shopify.com>

* fixed imports

Signed-off-by: Sebastian Rabenhorst <sebastian.rabenhorst@shopify.com>

* Enabled pushdown for query native hist test and removed ToDo

Signed-off-by: Sebastian Rabenhorst <sebastian.rabenhorst@shopify.com>

* Refactored native histogram query UI

Signed-off-by: Sebastian Rabenhorst <sebastian.rabenhorst@shopify.com>

---------

Signed-off-by: Sebastian Rabenhorst <sebastian.rabenhorst@shopify.com>
* store: add streamed snappy encoding for postings list

We've noticed that decoding Snappy compressed postings list
takes a lot of RAM:

```
(pprof) top
Showing nodes accounting for 1427.30GB, 67.55% of 2112.82GB total
Dropped 1069 nodes (cum <= 10.56GB)
Showing top 10 nodes out of 82
      flat  flat%   sum%        cum   cum%
         0     0%     0%  1905.67GB 90.20%  golang.org/x/sync/errgroup.(*Group).Go.func1
    2.08GB 0.098% 0.098%  1456.94GB 68.96%  github.com/thanos-io/thanos/pkg/store.(*blockSeriesClient).ExpandPostings
    1.64GB 0.078%  0.18%  1454.87GB 68.86%  github.com/thanos-io/thanos/pkg/store.(*bucketIndexReader).ExpandedPostings
    2.31GB  0.11%  0.29%  1258.15GB 59.55%  github.com/thanos-io/thanos/pkg/store.(*bucketIndexReader).fetchPostings
    1.48GB  0.07%  0.36%  1219.67GB 57.73%  github.com/thanos-io/thanos/pkg/store.diffVarintSnappyDecode
 1215.21GB 57.52% 57.87%  1215.21GB 57.52%  github.com/klauspost/compress/s2.Decode
```

This is because we are creating a new []byte slice for the decoded data
each time. To avoid this RAM usage problem, let's stream the decoding
from a given buffer. Since Snappy block format doesn't support streamed
decoding, let's switch to Snappy stream format which is made for exactly
that.

Notice that our current `index.Postings` list does not
support going back through Seek() even if theoretically one could want
something like that. Fortunately, to search for posting intersection, we
need to only go forward.

Benchmark data:

```
name                                                          time/op
PostingsEncodingDecoding/10000/raw/encode-16                  71.6µs ± 3%
PostingsEncodingDecoding/10000/raw/decode-16                  76.3ns ± 4%
PostingsEncodingDecoding/10000#01/snappy/encode-16            73.3µs ± 1%
PostingsEncodingDecoding/10000#01/snappy/decode-16            1.63µs ± 6%
PostingsEncodingDecoding/10000#02/snappyStreamed/encode-16     111µs ± 2%
PostingsEncodingDecoding/10000#02/snappyStreamed/decode-16    14.5µs ± 7%
PostingsEncodingDecoding/100000/snappyStreamed/encode-16      1.09ms ± 2%
PostingsEncodingDecoding/100000/snappyStreamed/decode-16      14.4µs ± 4%
PostingsEncodingDecoding/100000#01/raw/encode-16               710µs ± 1%
PostingsEncodingDecoding/100000#01/raw/decode-16              79.3ns ±13%
PostingsEncodingDecoding/100000#02/snappy/encode-16            719µs ± 1%
PostingsEncodingDecoding/100000#02/snappy/decode-16           13.5µs ± 4%
PostingsEncodingDecoding/1000000/raw/encode-16                7.14ms ± 1%
PostingsEncodingDecoding/1000000/raw/decode-16                81.7ns ± 9%
PostingsEncodingDecoding/1000000#01/snappy/encode-16          7.52ms ± 3%
PostingsEncodingDecoding/1000000#01/snappy/decode-16           139µs ± 4%
PostingsEncodingDecoding/1000000#02/snappyStreamed/encode-16  11.4ms ± 4%
PostingsEncodingDecoding/1000000#02/snappyStreamed/decode-16  15.5µs ± 4%

name                                                          alloc/op
PostingsEncodingDecoding/10000/raw/encode-16                  13.6kB ± 0%
PostingsEncodingDecoding/10000/raw/decode-16                   96.0B ± 0%
PostingsEncodingDecoding/10000#01/snappy/encode-16            25.9kB ± 0%
PostingsEncodingDecoding/10000#01/snappy/decode-16            11.0kB ± 0%
PostingsEncodingDecoding/10000#02/snappyStreamed/encode-16    16.6kB ± 0%
PostingsEncodingDecoding/10000#02/snappyStreamed/decode-16     148kB ± 0%
PostingsEncodingDecoding/100000/snappyStreamed/encode-16       148kB ± 0%
PostingsEncodingDecoding/100000/snappyStreamed/decode-16       148kB ± 0%
PostingsEncodingDecoding/100000#01/raw/encode-16               131kB ± 0%
PostingsEncodingDecoding/100000#01/raw/decode-16               96.0B ± 0%
PostingsEncodingDecoding/100000#02/snappy/encode-16            254kB ± 0%
PostingsEncodingDecoding/100000#02/snappy/decode-16            107kB ± 0%
PostingsEncodingDecoding/1000000/raw/encode-16                1.25MB ± 0%
PostingsEncodingDecoding/1000000/raw/decode-16                 96.0B ± 0%
PostingsEncodingDecoding/1000000#01/snappy/encode-16          2.48MB ± 0%
PostingsEncodingDecoding/1000000#01/snappy/decode-16          1.05MB ± 0%
PostingsEncodingDecoding/1000000#02/snappyStreamed/encode-16  1.47MB ± 0%
PostingsEncodingDecoding/1000000#02/snappyStreamed/decode-16   148kB ± 0%

name                                                          allocs/op
PostingsEncodingDecoding/10000/raw/encode-16                    2.00 ± 0%
PostingsEncodingDecoding/10000/raw/decode-16                    2.00 ± 0%
PostingsEncodingDecoding/10000#01/snappy/encode-16              3.00 ± 0%
PostingsEncodingDecoding/10000#01/snappy/decode-16              4.00 ± 0%
PostingsEncodingDecoding/10000#02/snappyStreamed/encode-16      4.00 ± 0%
PostingsEncodingDecoding/10000#02/snappyStreamed/decode-16      5.00 ± 0%
PostingsEncodingDecoding/100000/snappyStreamed/encode-16        4.00 ± 0%
PostingsEncodingDecoding/100000/snappyStreamed/decode-16        5.00 ± 0%
PostingsEncodingDecoding/100000#01/raw/encode-16                2.00 ± 0%
PostingsEncodingDecoding/100000#01/raw/decode-16                2.00 ± 0%
PostingsEncodingDecoding/100000#02/snappy/encode-16             3.00 ± 0%
PostingsEncodingDecoding/100000#02/snappy/decode-16             4.00 ± 0%
PostingsEncodingDecoding/1000000/raw/encode-16                  2.00 ± 0%
PostingsEncodingDecoding/1000000/raw/decode-16                  2.00 ± 0%
PostingsEncodingDecoding/1000000#01/snappy/encode-16            3.00 ± 0%
PostingsEncodingDecoding/1000000#01/snappy/decode-16            4.00 ± 0%
PostingsEncodingDecoding/1000000#02/snappyStreamed/encode-16    4.00 ± 0%
PostingsEncodingDecoding/1000000#02/snappyStreamed/decode-16    5.00 ± 0%
```

Compression ratios are still the same like previously:

```
$ /bin/go test -v -timeout 10m -run ^TestDiffVarintCodec$ github.com/thanos-io/thanos/pkg/store
[snip]
=== RUN   TestDiffVarintCodec/snappy/i!~"2.*"
    postings_codec_test.go:73: postings entries: 944450
    postings_codec_test.go:74: original size (4*entries): 3777800 bytes
    postings_codec_test.go:80: encoded size 44498 bytes
    postings_codec_test.go:81: ratio: 0.012
=== RUN   TestDiffVarintCodec/snappyStreamed/i!~"2.*"
    postings_codec_test.go:73: postings entries: 944450
    postings_codec_test.go:74: original size (4*entries): 3777800 bytes
    postings_codec_test.go:80: encoded size 44670 bytes
    postings_codec_test.go:81: ratio: 0.012
```

Signed-off-by: Giedrius Statkevičius <giedrius.statkevicius@vinted.com>

* store: clean up postings code

Signed-off-by: Giedrius Statkevičius <giedrius.statkevicius@vinted.com>

* store: fix estimation

Signed-off-by: Giedrius Statkevičius <giedrius.statkevicius@vinted.com>

* store: use buffer.Bytes()

Signed-off-by: Giedrius Statkevičius <giedrius.statkevicius@vinted.com>

* store/postings_codec: reuse extgrpc compressors/decompressors

Signed-off-by: Giedrius Statkevičius <giedrius.statkevicius@vinted.com>

* CHANGELOG: add item

Signed-off-by: Giedrius Statkevičius <giedrius.statkevicius@vinted.com>

* CHANGELOG: clean up whitespace

Signed-off-by: Giedrius Statkevičius <giedrius.statkevicius@vinted.com>

---------

Signed-off-by: Giedrius Statkevičius <giedrius.statkevicius@vinted.com>
With lots of blocks it could take some time to fill this no compact
marked map hence replace it atomically. I believe this leads to problems
in the compaction planner where it picks up no compact marked blocks
because meta syncer does synchronizations concurrently.

Signed-off-by: Giedrius Statkevičius <giedrius.statkevicius@vinted.com>
Signed-off-by: Filip Petkovski <filip.petkovsky@gmail.com>
Signed-off-by: Filip Petkovski <filip.petkovsky@gmail.com>
Signed-off-by: Filip Petkovski <filip.petkovsky@gmail.com>
…-heap-less-func

Reuse buffers for label comparison
Signed-off-by: Walther Lee <walthere.lee@gmail.com>
Signed-off-by: Sebastian Rabenhorst <sebastian.rabenhorst@shopify.com>
Signed-off-by: Philip Gough <philip.p.gough@gmail.com>
Signed-off-by: Walther Lee <walthere.lee@gmail.com>
* Replaced summary in extprom metrics with histogram

Signed-off-by: Sebastian Rabenhorst <sebastian.rabenhorst@shopify.com>

* Added changelog

Signed-off-by: Sebastian Rabenhorst <sebastian.rabenhorst@shopify.com>

* Removed unused parameters from NewInstrumentationMiddleware

Signed-off-by: Sebastian Rabenhorst <sebastian.rabenhorst@shopify.com>

* Reverted NewInstrumentationMiddleware

Signed-off-by: Sebastian Rabenhorst <sebastian.rabenhorst@shopify.com>

---------

Signed-off-by: Sebastian Rabenhorst <sebastian.rabenhorst@shopify.com>
This commit exposes the label set alongside the min and max time
for each TSDB covered by a Store.

This information is used to scope the min time for a remote query
so that we do not produce partial aggregates in distriuted mode.

Signed-off-by: Filip Petkovski <filip.petkovsky@gmail.com>
Signed-off-by: Filip Petkovski <filip.petkovsky@gmail.com>
Signed-off-by: Sebastian Rabenhorst <sebastian.rabenhorst@shopify.com>

Cleanup

Signed-off-by: Sebastian Rabenhorst <sebastian.rabenhorst@shopify.com>
Signed-off-by: Sebastian Rabenhorst <sebastian.rabenhorst@shopify.com>
Author: Subbarao Meduri <smeduri@redhat.com>
v0.32.3
Signed-off-by: Subbarao Meduri <smeduri@redhat.com>
@subbarao-meduri subbarao-meduri changed the title Upgrade to thanos 0.32.3 [release-2.9] Upgrade to thanos 0.32.3 Sep 20, 2023
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/retest-required

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/retest-required

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/test images

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/lgtm

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What's the motive for removing this file? Seems like it is useful. 🙂

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I believe the instructions are dated 🙂

I used these instructions for doing the merge:
https://stackoverflow.com/questions/173919/is-there-a-theirs-version-of-git-merge-s-ours
(See section A possible and tested solution for merging branchB into our checked-out branchA:)

I will need to script this (separate PR) so it can be reused going forward.

@@ -1,10 +0,0 @@
sonar.projectKey=open-cluster-management_thanos
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Is this from some previously used CI?

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Yes, we no longer run sonarCloud on maintenance forks.

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openshift-ci bot commented Sep 21, 2023

[APPROVALNOTIFIER] This PR is APPROVED

This pull-request has been approved by: douglascamata, saswatamcode, subbarao-meduri

The full list of commands accepted by this bot can be found here.

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@saswatamcode - docs / Documentation check (pull_request) seem to fail frequently due to unreachable URLs. Do you see the same behavior upstream too? Curious what it takes to fix this so it passes consistently.

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/retest-required

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Yup, the docs check fails due to lightstep.com no longer being available (changed to a servicenow link). I fixed it on main, but not on release branches.

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openshift-ci bot commented Sep 21, 2023

@subbarao-meduri: The following tests failed, say /retest to rerun all failed tests or /retest-required to rerun all mandatory failed tests:

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ci/prow/pr-image-mirror 67eb61a link true /test pr-image-mirror
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@subbarao-meduri subbarao-meduri merged commit 8727d9f into stolostron:release-2.9 Sep 21, 2023
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subbarao-meduri commented Sep 21, 2023

Merging as OpenShift CI problems are not resolved even after 24 ours. Given e2e tests have passed, we have high confidence.

subbarao-meduri added a commit that referenced this pull request Nov 9, 2023
This reverts commit 8727d9f.
Signed-off-by: Subbarao Meduri <smeduri@redhat.com>
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/test pr-image-mirror

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/test images

subbarao-meduri added a commit to subbarao-meduri/thanos that referenced this pull request Nov 10, 2023
This reverts commit c2dccb9.
Signed-off-by: Subbarao Meduri <smeduri@redhat.com>
subbarao-meduri added a commit that referenced this pull request Nov 10, 2023
* Revert "upgrade golang/x/net to 0.17.0 (#92)"

This reverts commit 1a7d05c.
Signed-off-by: Subbarao Meduri <smeduri@redhat.com>

* Revert "Revert "[release-2.9] Upgrade to thanos 0.32.3 (#84)""

This reverts commit c2dccb9.
Signed-off-by: Subbarao Meduri <smeduri@redhat.com>

* Revert "Revert "upgrade golang/x/net to 0.17.0 (#85)""

This reverts commit 8214b23.
Signed-off-by: Subbarao Meduri <smeduri@redhat.com>

* Revert "Revert "update busybox version (#91)""

This reverts commit 485c4f7.
Signed-off-by: Subbarao Meduri <smeduri@redhat.com>
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