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flarry_test.py
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flarry_test.py
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"Unit tests of larry functions."
import unittest
import datetime
import numpy as np
nan = np.nan
from numpy.testing import assert_array_equal
from la import larry, rand
from la import (union, intersection, panel, stack, cov, align, isaligned,
binaryop, add, subtract, multiply, divide, unique, sortby,
align_axis, lrange, ones, zeros)
from la.util.testing import assert_larry_equal as ale
class Test_func(unittest.TestCase):
"Test larry functions in flarry"
def test_union_1(self):
"func.union_1"
y1 = larry([[1, 2], [3, 4]], [['a', 'b'], ['c', 'd']])
y2 = larry([[1, 2], [3, 4]], [['e', 'b'], ['f', 'd']])
actual = union(0, y1, y2)
desired = ['a', 'b', 'e']
self.assert_(actual == desired, 'union axis=0')
actual = union(1, y1, y2)
desired = ['c', 'd', 'f']
self.assert_(actual == desired, 'union axis=1')
def test_intersection_1(self):
"func.intersection_1"
y1 = larry([[1, 2], [3, 4]], [['a', 'b'], ['c', 'd']])
y2 = larry([[1, 2], [3, 4]], [['e', 'b'], ['f', 'd']])
actual = intersection(0, y1, y2)
desired = ['b']
self.assert_(actual == desired, 'intersection axis=0')
actual = intersection(1, y1, y2)
desired = ['d']
self.assert_(actual == desired, 'intersection axis=1')
def test_isaligned_1(self):
"isaligned_1"
lar1 = larry([[1, 2], [3, 4]], [['r1', 'r2'], ['c1', 'c2']])
lar2 = larry([[5, 6], [7, 8]], [['r2', 'r1'], ['c1', 'c2']])
a = isaligned(lar1, lar2)
self.assert_(~a, "Should return False")
def test_isaligned_2(self):
"isaligned_2"
lar1 = larry([[1, 2], [3, 4]], [['r1', 'r2'], ['c1', 'c2']])
lar2 = larry([[4, 5], [6, 7]], [['r2', 'r1'], ['c1', 'c2']])
a = isaligned(lar1, lar2, axis=0)
self.assert_(~a, "Should return False")
def test_isaligned_3(self):
"isaligned_3"
lar1 = larry([[1, 2], [3, 4]], [['r1', 'r2'], ['c1', 'c2']])
lar2 = larry([[5, 6], [7, 8]], [['r2', 'r1'], ['c1', 'c2']])
a = isaligned(lar1, lar2, axis=1)
self.assert_(a, "Should return True")
def test_isaligned_4(self):
"isaligned_4"
lar1 = larry([[1, 2], [3, 4]], [['r1', 'r2'], ['c1', 'c2']])
lar2 = larry([5, 6], [['r1', 'r2']])
a = isaligned(lar1, lar2, axis=0)
self.assert_(a, "Should return True")
def test_isaligned_5(self):
"isaligned_5"
lar1 = larry([[1, 2], [3, 4]], [['r1', 'r2'], ['c1', 'c2']])
lar2 = larry([5, 6], [['r1', 'r2']])
a = isaligned(lar1, lar2)
self.assert_(~a, "Should return False")
def test_panel_1(self):
"func.panel_1"
x = np.ones((4,3), dtype=np.int).cumsum(0) - 1
label = [['r1', 'r2', 'r3', 'r4'], ['c1', 'c2', 'c3']]
original = larry(x, label)
original = original.insertaxis(0, "name")
actual = panel(original)
x = np.array([[0,0,0,1,1,1,2,2,2,3,3,3]]).T
label = [[('r1', 'c1'),
('r1', 'c2'),
('r1', 'c3'),
('r2', 'c1'),
('r2', 'c2'),
('r2', 'c3'),
('r3', 'c1'),
('r3', 'c2'),
('r3', 'c3'),
('r4', 'c1'),
('r4', 'c2'),
('r4', 'c3')], ['name']]
desired = larry(x, label)
ale(actual, desired, msg='panel test #1', original=original)
def test_panel_2(self):
"func.panel_2"
x = np.ones((4,3)).cumsum(0) - 1
label = [['r1', 'r2', 'r3', 'r4'], ['c1', 'c2', 'c3']]
original = larry(x, label)
original = original.insertaxis(0, "name")
y = original.copy()
y.label[0] = ["two"]
original = original.merge(y)
actual = panel(original)
x = np.array([[0,0,0,1,1,1,2,2,2,3,3,3]], dtype=np.float).T
x = np.hstack((x,x))
label = [[('r1', 'c1'),
('r1', 'c2'),
('r1', 'c3'),
('r2', 'c1'),
('r2', 'c2'),
('r2', 'c3'),
('r3', 'c1'),
('r3', 'c2'),
('r3', 'c3'),
('r4', 'c1'),
('r4', 'c2'),
('r4', 'c3')], ['name', 'two']]
desired = larry(x, label)
ale(actual, desired, msg='panel test #2', original=original)
def test_stack_1(self):
"func.stack_1"
y1 = larry([[1, 2], [3, 4]])
y2 = larry([[5, 6], [7, 8]])
actual = stack('union', name1=y1, othername=y2)
x = np.array([[[ 5., 6.],
[ 7., 8.]],
[[ 1., 2.],
[ 3., 4.]]])
label = [['othername', 'name1'], [0, 1], [0, 1]]
desired = larry(x, label)
ale(actual, desired, msg='stack test #1')
def test_cov_1(self):
"func.cov_1"
original = larry([[ 2.0, 2.0, 3.0, 1.0],
[ 3.0, 2.0, 2.0, 1.0],
[ 1.0, 1.0, 1.0, 1.0]])
original = original.demean(axis=1)
desired = larry([[ 0.5, 0.25, 0. ],
[ 0.25, 0.5, 0. ],
[ 0., 0., 0. ]])
actual = cov(original)
ale(actual, desired, msg='cov test #1', original=original)
def test_cov_2(self):
"func.cov_2"
original = larry([[nan, 2.0, 1.0],
[2.0, 3.0, 1.0],
[4.0, 1.0, 1.0]])
original = original.demean(1)
desired = larry(np.ma.cov(np.ma.fix_invalid(original.x), bias=1).data)
actual = cov(original)
ale(actual, desired, msg='cov test #2', original=original)
def test_unique_1(self):
arr = unique(larry([1, 1, 2, 2, 3, 3]))
assert_array_equal(arr, np.array([1, 2, 3]), "la.unique failed")
def test_unique_2(self):
lar = larry([[1, 1], [2, 3]])
arr = unique(lar)
assert_array_equal(arr, np.array([1, 2, 3]), "la.unique failed")
def test_unique_3(self):
lar = larry(['a', 'b', 'b', 'c', 'a'])
u, indices = unique(lar, return_index=True)
assert_array_equal(u, np.array(['a', 'b', 'c'], dtype='|S1'))
assert_array_equal(indices, np.array([0, 1, 3]))
assert_array_equal(lar[indices], np.array(['a','b','c'], dtype='|S1'))
def test_unique_4(self):
lar = larry([1, 2, 6, 4, 2, 3, 2])
u, indices = unique(lar, return_inverse=True)
assert_array_equal(u, np.array([1, 2, 3, 4, 6]))
assert_array_equal(indices, np.array([0, 1, 4, 3, 1, 2, 1]))
assert_array_equal(u[indices], np.array([1, 2, 6, 4, 2, 3, 2]))
class Test_align_1d(unittest.TestCase):
"Test 1d alignment of larrys"
def test_1d1(self):
"align 1d test #1"
y1 = larry([1, 2])
y2 = larry([1, 2, 3])
a1, a2 = align(y1, y2)
d1 = larry([1, 2])
d2 = larry([1, 2])
msg = "align 1d fail on %s larry"
ale(a1, d1, msg % 'left', original=y1)
ale(a2, d2, msg % 'right', original=y2)
def test_1d2(self):
"align 1d test #2"
y1 = larry([1, 2])
y2 = larry([1, 2, 3])
a1, a2 = align(y1, y2, join='inner')
d1 = larry([1, 2])
d2 = larry([1, 2])
msg = "align 1d fail on %s larry"
ale(a1, d1, msg % 'left', original=y1)
ale(a2, d2, msg % 'right', original=y2)
def test_1d3(self):
"align 1d test #3"
y1 = larry([1, 2])
y2 = larry([1, 2, 3])
a1, a2 = align(y1, y2, join='inner', cast=False)
d1 = larry([1, 2])
d2 = larry([1, 2])
msg = "align 1d fail on %s larry"
ale(a1, d1, msg % 'left', original=y1)
ale(a2, d2, msg % 'right', original=y2)
def test_1d4(self):
"align 1d test #4"
y1 = larry([1, 2])
y2 = larry([1, 2, 3])
a1, a2 = align(y1, y2, join='outer')
d1 = larry([1, 2, nan], dtype=float)
d2 = larry([1, 2, 3])
msg = "align 1d fail on %s larry"
ale(a1, d1, msg % 'left', original=y1)
ale(a2, d2, msg % 'right', original=y2)
def test_1d5(self):
"align 1d test #5"
y1 = larry([1, 2])
y2 = larry([1, 2, 3])
self.failUnlessRaises(TypeError, align, y1, y2, 'outer', False)
def test_1d6(self):
"align 1d test #6"
y1 = larry([1, 2])
y2 = larry([1, 2, 3])
a1, a2 = align(y1, y2, join='left')
d1 = larry([1, 2])
d2 = larry([1, 2])
msg = "align 1d fail on %s larry"
ale(a1, d1, msg % 'left', original=y1)
ale(a2, d2, msg % 'right', original=y2)
def test_1d7(self):
"align 1d test #7"
y1 = larry([1, 2])
y2 = larry([1, 2, 3])
a1, a2 = align(y1, y2, join='right')
d1 = larry([1, 2, nan], dtype=float)
d2 = larry([1, 2, 3])
msg = "align 1d fail on %s larry"
ale(a1, d1, msg % 'left', original=y1)
ale(a2, d2, msg % 'right', original=y2)
def test_1d8(self):
"align 1d test #8"
y1 = larry([1, 2])
y2 = larry([1, 2, 3])
a1, a2 = align(y1, y2, join=['right'])
d1 = larry([1, 2, nan], dtype=float)
d2 = larry([1, 2, 3])
msg = "align 1d fail on %s larry"
ale(a1, d1, msg % 'left', original=y1)
ale(a2, d2, msg % 'right', original=y2)
def test_1d9(self):
"align 1d test #9"
y1 = larry([1, 2])
y2 = larry([1, 2], [['a', 'b']])
a1, a2 = align(y1, y2)
d1 = larry([], dtype=int)
d2 = larry([], dtype=int)
msg = "align 1d fail on %s larry"
ale(a1, d1, msg % 'left', original=y1)
ale(a2, d2, msg % 'right', original=y2)
def test_1d10(self):
"align 1d test #10"
y1 = larry([1, 2])
y2 = larry([1, 2], [['a', 'b']])
a1, a2 = align(y1, y2, join='inner')
d1 = larry([], dtype=int)
d2 = larry([], dtype=int)
msg = "align 1d fail on %s larry"
ale(a1, d1, msg % 'left', original=y1)
ale(a2, d2, msg % 'right', original=y2)
def test_1d11(self):
"align 1d test #11"
y1 = larry([1, 2])
y2 = larry([1, 2], [['a', 'b']])
a1, a2 = align(y1, y2, join='inner')
d1 = larry([], dtype=int)
d2 = larry([], dtype=int)
msg = "align 1d fail on %s larry"
ale(a1, d1, msg % 'left', original=y1)
ale(a2, d2, msg % 'right', original=y2)
def test_1d12(self):
"align 1d test #12"
y1 = larry([1, 2])
y2 = larry([1, 2], [['a', 'b']])
a1, a2 = align(y1, y2, join='outer')
d1 = larry([1, 2, nan, nan], [[0, 1, 'a', 'b']], dtype=float)
d2 = larry([nan, nan, 1, 2], [[0, 1, 'a', 'b']], dtype=float)
msg = "align 1d fail on %s larry"
ale(a1, d1, msg % 'left', original=y1)
ale(a2, d2, msg % 'right', original=y2)
def test_1d13(self):
"align 1d test #13"
y1 = larry([1, 2])
y2 = larry([1, 2], [['a', 'b']])
self.failUnlessRaises(TypeError, align, y1, y2, 'outer', False)
def test_1d14(self):
"align 1d test #14"
y1 = larry([1, 2])
y2 = larry([1, 2], [['a', 'b']])
a1, a2 = align(y1, y2, join='left')
d1 = larry([1, 2])
d2 = larry([nan, nan])
msg = "align 1d fail on %s larry"
ale(a1, d1, msg % 'left', original=y1)
ale(a2, d2, msg % 'right', original=y2)
def test_1d15(self):
"align 1d test #15"
y1 = larry([1, 2])
y2 = larry([1, 2], [['a', 'b']])
a1, a2 = align(y1, y2, join='right')
d1 = larry([nan, nan], [['a', 'b']])
d2 = larry([1, 2], [['a', 'b']])
msg = "align 1d fail on %s larry"
ale(a1, d1, msg % 'left', original=y1)
ale(a2, d2, msg % 'right', original=y2)
def test_1d16(self):
"align 1d test #16"
y1 = larry([1, 2])
y2 = larry([1, 2], [['a', 'b']])
a1, a2 = align(y1, y2, join=['left'])
d1 = larry([1, 2])
d2 = larry([nan, nan])
msg = "align 1d fail on %s larry"
ale(a1, d1, msg % 'left', original=y1)
ale(a2, d2, msg % 'right', original=y2)
def test_1d17(self):
"align 1d test #17"
y1 = larry([1, 2])
y2 = larry([1, 2], [['a', 'b']])
self.failUnlessRaises(TypeError, align, y1, y2, 'outer', False)
def test_1d18(self):
"align 1d test #18"
y1 = larry([1, 2])
y2 = larry([1, 2])
a1, a2 = align(y1, y2, cast=False)
d1 = larry([1, 2])
d2 = larry([1, 2])
msg = "align 1d fail on %s larry"
ale(a1, d1, msg % 'left', original=y1)
ale(a2, d2, msg % 'right', original=y2)
def test_1d19(self):
"align 1d test #19"
y1 = larry([True, False])
y2 = larry([True, False, True])
a1, a2 = align(y1, y2, join='outer')
d1 = larry([1, 0, nan], dtype=float)
d2 = larry([True, False, True])
msg = "align 1d fail on %s larry"
ale(a1, d1, msg % 'left', original=y1)
ale(a2, d2, msg % 'right', original=y2)
def test_1d20(self):
"align 1d test #20"
d = datetime.date
y1 = larry([d(2011,1,1), d(2011,1,2)])
y2 = larry([d(2011,1,3), d(2011,1,4), d(2011,1,5)])
a1, a2 = align(y1, y2, join='outer')
d1 = larry([d(2011,1,1), d(2011,1,2), None])
d2 = larry([d(2011,1,3), d(2011,1,4), d(2011,1,5)])
msg = "align 1d fail on %s larry"
ale(a1, d1, msg % 'left', original=y1)
ale(a2, d2, msg % 'right', original=y2)
def test_1d21(self):
"align 1d test #21"
y1 = larry([1, 2, 3])
y2 = larry([1, 2, 3, 4])
a1, a2 = align(y1, y2, join='skip')
d1, d2 = y1.copy(), y2.copy()
msg = "align 1d fail on %s larry"
ale(a1, d1, msg % 'left', original=y1)
ale(a2, d2, msg % 'right', original=y2)
class Test_align_2d(unittest.TestCase):
"Test 2d alignment of larrys"
def test_2d1(self):
"align 2d test #1"
y1 = larry([[1, 2], [3, 4]])
y2 = larry([[1, 2, 5], [3, 4, 6]])
a1, a2 = align(y1, y2)
d1 = larry([[1, 2], [3, 4]])
d2 = larry([[1, 2], [3, 4]])
msg = "align 2d fail on %s larry"
ale(a1, d1, msg % 'left', original=y1)
ale(a2, d2, msg % 'right', original=y2)
def test_2d2(self):
"align 2d test #2"
y1 = larry([[1, 2], [3, 4]])
y2 = larry([[1, 2, 5], [3, 4, 6]])
a1, a2 = align(y1, y2, join='inner')
d1 = larry([[1, 2], [3, 4]])
d2 = larry([[1, 2], [3, 4]])
msg = "align 2d fail on %s larry"
ale(a1, d1, msg % 'left', original=y1)
ale(a2, d2, msg % 'right', original=y2)
def test_2d3(self):
"align 2d test #3"
y1 = larry([[1, 2], [3, 4]])
y2 = larry([[1, 2, 5], [3, 4, 6]])
a1, a2 = align(y1, y2, join='inner', cast=False)
d1 = larry([[1, 2], [3, 4]])
d2 = larry([[1, 2], [3, 4]])
msg = "align 2d fail on %s larry"
ale(a1, d1, msg % 'left', original=y1)
ale(a2, d2, msg % 'right', original=y2)
def test_2d4(self):
"align 2d test #4"
y1 = larry([[1, 2], [3, 4]])
y2 = larry([[1, 2, 5], [3, 4, 6]])
a1, a2 = align(y1, y2, join='outer')
d1 = larry([[1, 2, nan], [3, 4, nan]], dtype=float)
d2 = larry([[1, 2, 5], [3, 4, 6]])
msg = "align 2d fail on %s larry"
ale(a1, d1, msg % 'left', original=y1)
ale(a2, d2, msg % 'right', original=y2)
def test_2d5(self):
"align 2d test #5"
y1 = larry([[1, 2], [3, 4]])
y2 = larry([[1, 2, 5], [3, 4, 6]])
self.failUnlessRaises(TypeError, align, y1, y2, 'outer', False)
def test_2d6(self):
"align 2d test #6"
y1 = larry([[1, 2], [3, 4]])
y2 = larry([[1, 2, 5], [3, 4, 6]])
a1, a2 = align(y1, y2, join=['inner', 'outer'])
d1 = larry([[1, 2, nan], [3, 4, nan]])
d2 = larry([[1, 2, 5], [3, 4, 6]])
msg = "align 2d fail on %s larry"
ale(a1, d1, msg % 'left', original=y1)
ale(a2, d2, msg % 'right', original=y2)
def test_2d7(self):
"align 2d test #7"
y1 = larry([[1, 2], [3, 4]])
y2 = larry([[1, 2, 5], [3, 4, 6]])
j = ['outer', 'inner', 'left']
self.failUnlessRaises(ValueError, align, y1, y2, j, False)
def test_2d8(self):
"align 2d test #8"
y1 = larry([[1, 2], [3, 4]])
y2 = larry([[1, 2], [3, 4]])
a1, a2 = align(y1, y2, cast=False)
d1 = larry([[1, 2], [3, 4]])
d2 = larry([[1, 2], [3, 4]])
msg = "align 2d fail on %s larry"
ale(a1, d1, msg % 'left', original=y1)
ale(a2, d2, msg % 'right', original=y2)
def test_2d9(self):
"align 2d test #9"
y1 = larry([[1, 2], [3, 4]])
y2 = larry([[1, 2, 5], [3, 4, 6]])
a1, a2 = align(y1, y2, 'skip')
d1, d2 = y1.copy(), y2.copy()
msg = "align 2d fail on %s larry"
ale(a1, d1, msg % 'left', original=y1)
ale(a2, d2, msg % 'right', original=y2)
def test_2d10(self):
"align 2d test #10"
y1 = larry([[1, 2], [3, 4], [7, 8]])
y2 = larry([[1, 2, 5], [3, 4, 6]])
a1, a2 = align(y1, y2, ['inner', 'skip'])
d1 = larry([[1, 2], [3, 4]])
d2 = larry([[1, 2, 5], [3, 4, 6]])
msg = "align 2d fail on %s larry"
ale(a1, d1, msg % 'left', original=y1)
ale(a2, d2, msg % 'right', original=y2)
def test_2d11(self):
"align 2d test #11"
y1 = larry([[0.1, 0.2], [0.3, 0.4], [0.7, 0.8]])
y2 = larry([[0.1, 0.2, 0.5], [0.3, 0.4, 0.6]])
a1, a2 = align(y1, y2, ['skip', 'outer'])
d1 = larry([[0.1, 0.2, np.nan], [0.3, 0.4, np.nan],
[0.7, 0.8, np.nan]])
d2 = larry([[0.1, 0.2, 0.5], [0.3, 0.4, 0.6]])
msg = "align 2d fail on %s larry"
ale(a1, d1, msg % 'left', original=y1)
ale(a2, d2, msg % 'right', original=y2)
class Test_align_axis(unittest.TestCase):
"Test align_axis on larrys"
def test_align_axis_1(self):
y1 = larry([[0.1, 0.2], [0.3, 0.4], [0.7, 0.8]])
y2 = larry([[0.1, 0.2, 0.5], [0.3, 0.4, 0.6]])
a1, a2 = align_axis([y1, y2], axis=1, join='outer')
d1 = larry([[0.1, 0.2, np.nan], [0.3, 0.4, np.nan],
[0.7, 0.8, np.nan]])
d2 = larry([[0.1, 0.2, 0.5], [0.3, 0.4, 0.6]])
msg = "align_axis fail on %s larry"
ale(a1, d1, msg % 'left', original=y1)
ale(a2, d2, msg % 'right', original=y2)
def test_align_axis_2(self):
"align 2d test #10"
y1 = larry([[1, 2], [3, 4], [7, 8]])
y2 = larry([[1, 2, 5], [3, 4, 6]])
a1, a2 = align_axis([y1, y2], axis=0, join='inner')
d1 = larry([[1, 2], [3, 4]])
d2 = larry([[1, 2, 5], [3, 4, 6]])
msg = "align_axis fail on %s larry"
ale(a1, d1, msg % 'left', original=y1)
ale(a2, d2, msg % 'right', original=y2)
def test_align_axis_3(self):
y1 = larry([1.0, 2.0, 3.0, 4.0], [[1, 2, 3, 4]])
y2 = larry([5.0, 6.0], [[2, 3]])
y3 = larry([7.0, 8.0, 9.0], [[2, 3, 5]])
a1, a2, a3 = align_axis([y1, y2, y3])
dlab = [[2, 3]]
d1 = larry([2.0, 3.0], dlab)
d2 = larry([5.0, 6.0], dlab)
d3 = larry([7.0, 8.0], dlab)
msg = "align_axis fail on %s larry"
ale(a1, d1, msg % '1st', original=y1)
ale(a2, d2, msg % '2nd', original=y2)
ale(a3, d3, msg % '3rd', original=y3)
def test_align_axis_4(self):
y1 = larry([1.0, 2.0, 3.0, 4.0], [[1, 2, 3, 4]])
y2 = larry([5.0, 6.0], [[2, 3]])
y3 = larry([7.0, 8.0, 9.0], [[2, 3, 5]])
a1, a2, a3 = align_axis([y1, y2, y3], join='outer')
dlab = [[1, 2, 3, 4, 5]]
d1 = larry([1.0, 2.0, 3.0, 4.0, nan], dlab)
d2 = larry([nan, 5.0, 6.0, nan, nan], dlab)
d3 = larry([nan, 7.0, 8.0, nan, 9.0], dlab)
msg = "align_axis fail on %s larry"
ale(a1, d1, msg % '1st', original=y1)
ale(a2, d2, msg % '2nd', original=y2)
ale(a3, d3, msg % '3rd', original=y3)
def test_align_axis_5(self):
y1 = larry([[1.0, 2.0],
[3.0, 4.0],
[5.0, 6.0]], [['a', 'b', 'c'], [1, 2]])
y2 = larry([['x'], ['y'], ['z']], [['a', 'b', 'cc'], [1]])
y3 = larry([50, 51, 52], [['aa', 'b', 'c']])
a1, a2, a3 = align_axis([y1, y2, y3], axis=0, join='inner')
d1 = larry([[3.0, 4.0]], [['b'], [1, 2]])
d2 = larry([['y']], [['b'], [1]])
d3 = larry([51], [['b']])
msg = "align_axis fail on %s larry"
ale(a1, d1, msg % '1st', original=y1)
ale(a2, d2, msg % '2nd', original=y2)
ale(a3, d3, msg % '3rd', original=y3)
def test_align_axis_6(self):
y1 = larry([[1.0, 2.0],
[3.0, 4.0],
[5.0, 6.0]], [['a', 'b', 'c'], [1, 2]])
y2 = larry([['x'], ['y'], ['z']], [['a', 'b', 'cc'], [1]])
y3 = larry([50, 51, 52], [['aa', 'b', 'c']])
a1, a2, a3 = align_axis([y1, y2, y3], axis=0, join='outer')
d1 = larry([[1.0, 2.0],
[nan, nan],
[3.0, 4.0],
[5.0, 6.0],
[nan, nan]],
label = [['a', 'aa', 'b', 'c', 'cc'], [1, 2]])
d2 = larry([['x'], [''], ['y'], [''], ['z']],
[['a', 'aa', 'b', 'c', 'cc'], [1]])
d3 = larry([nan, 50.0, 51.0, 52.0, nan], [['a', 'aa', 'b', 'c', 'cc']])
msg = "align_axis fail on %s larry"
ale(a1, d1, msg % '1st', original=y1)
ale(a2, d2, msg % '2nd', original=y2)
ale(a3, d3, msg % '3rd', original=y3)
def test_align_axis_7(self):
y1 = larry([[1.0, 2.0],
[3.0, 4.0],
[5.0, 6.0]], [['a', 'b', 'c'], [1, 2]])
y2 = larry([['x'], ['y'], ['z']], [['a', 'b', 'cc'], [1]])
y3 = larry([50, 51, 52], [['aa', 'b', 'c']])
a1, a2, a3 = align_axis([y1, y2, y3], axis=0, join='left')
d1 = larry([[1.0, 2.0],
[3.0, 4.0],
[5.0, 6.0]], [['a', 'b', 'c'], [1, 2]])
d2 = larry([['x'], ['y'], ['']],
[['a', 'b', 'c'], [1]])
d3 = larry([nan, 51.0, 52.0], [['a', 'b', 'c']])
msg = "align_axis fail on %s larry"
ale(a1, d1, msg % '1st', original=y1)
ale(a2, d2, msg % '2nd', original=y2)
ale(a3, d3, msg % '3rd', original=y3)
def test_align_axis_8(self):
y1 = larry([[1.0, 2.0],
[3.0, 4.0],
[5.0, 6.0]], [['a', 'b', 'c'], [1, 2]])
y2 = larry([['x'], ['y'], ['z']], [['a', 'b', 'cc'], [1]])
y3 = larry([50, 51, 52], [['aa', 'b', 'c']])
a3, a2, a1 = align_axis([y3, y2, y1], axis=0, join='right')
d1 = larry([[1.0, 2.0],
[3.0, 4.0],
[5.0, 6.0]], [['a', 'b', 'c'], [1, 2]])
d2 = larry([['x'], ['y'], ['']],
[['a', 'b', 'c'], [1]])
d3 = larry([nan, 51.0, 52.0], [['a', 'b', 'c']])
msg = "align_axis fail on %s larry"
ale(a1, d1, msg % '1st', original=y1)
ale(a2, d2, msg % '2nd', original=y2)
ale(a3, d3, msg % '3rd', original=y3)
def test_align_axis_9(self):
y1 = larry([[1.0, 2.0],
[3.0, 4.0],
[5.0, 6.0]], [['a', 'b', 'c'], [1, 2]])
y1 = y1.T
y2 = larry([['x'], ['y'], ['z']], [['a', 'b', 'cc'], [1]])
y3 = larry([50, 51, 52], [['aa', 'b', 'c']])
a1, a2, a3 = align_axis([y1, y2, y3], axis=[1, 0, 0], join='left')
d1 = larry([[1.0, 2.0],
[3.0, 4.0],
[5.0, 6.0]], [['a', 'b', 'c'], [1, 2]])
d1 = d1.T
d2 = larry([['x'], ['y'], ['']],
[['a', 'b', 'c'], [1]])
d3 = larry([nan, 51.0, 52.0], [['a', 'b', 'c']])
msg = "align_axis fail on %s larry"
ale(a1, d1, msg % '1st', original=y1)
ale(a2, d2, msg % '2nd', original=y2)
ale(a3, d3, msg % '3rd', original=y3)
class Test_quick_inst(unittest.TestCase):
"Test quick larry-creation functions."
def test_lrange_1(self):
a = lrange(5)
d = larry([0, 1, 2, 3, 4])
ale(a, d, "lrange failed.")
def test_lrange_2(self):
a = lrange(label=[['a', 'b', 'c', 'd']])
d = larry([0, 1, 2, 3], [['a', 'b', 'c', 'd']])
ale(a, d, "lrange failed.")
def test_lrange_3(self):
a = lrange((2, 2), dtype='f8')
d = larry(np.array([0, 1, 2, 3], dtype='f8').reshape(2,2))
ale(a, d, "lrange failed.")
def test_lrange_4(self):
a = lrange([['a', 'b'], ['c', 'd']])
d = larry([[0, 1], [2, 3]], [['a', 'b'], ['c', 'd']])
ale(a, d, "lrange failed.")
def test_ones_1(self):
a = ones(5)
d = larry([1., 1., 1., 1., 1.])
ale(a, d, "ones failed.")
def test_ones_2(self):
a = ones(label=[['a', 'b', 'c', 'd']])
d = larry([1., 1., 1., 1.], [['a', 'b', 'c', 'd']])
ale(a, d, "ones failed.")
def test_ones_3(self):
a = ones((2, 2), dtype='i8')
d = larry(np.array([1., 1., 1., 1.], dtype='i8').reshape(2,2))
ale(a, d, "ones failed.")
def test_ones_4(self):
a = ones([['a', 'b'], ['c', 'd']])
d = larry([[1., 1.], [1., 1.]], [['a', 'b'], ['c', 'd']])
ale(a, d, "ones failed.")
def test_zeros_1(self):
a = zeros(5)
d = larry([0., 0., 0., 0., 0.])
ale(a, d, "zeros failed.")
def test_zeros_2(self):
a = zeros(label=[['a', 'b', 'c', 'd']])
d = larry([0., 0., 0., 0.], [['a', 'b', 'c', 'd']])
ale(a, d, "zeros failed.")
def test_zeros_3(self):
a = zeros((2, 2), dtype='i8')
d = larry(np.array([0., 0., 0., 0.], dtype='i8').reshape(2,2))
ale(a, d, "zeros failed.")
def test_zeros_4(self):
a = zeros([['a', 'b'], ['c', 'd']])
d = larry([[0., 0.], [0., 0.]], [['a', 'b'], ['c', 'd']])
ale(a, d, "zeros failed.")
class Test_binaryop(unittest.TestCase):
"Test la.binaryop()"
def test_binaryop_01(self):
"binaryop test #01"
y1 = larry([1, 2])
y2 = larry([1, 2, 3])
actual = binaryop(np.add, y1, y2)
desired = larry([2, 4])
msg = "binaryop failed"
ale(actual, desired, msg, original=y1)
ale(actual, desired, msg, original=y2)
def test_binaryop_02(self):
"binaryop test #02"
y1 = larry([1, 2])
y2 = larry([1, 2, 3])
actual = binaryop(np.add, y1, y2, join='inner')
desired = larry([2, 4])
msg = "binaryop failed"
ale(actual, desired, msg, original=y1)
ale(actual, desired, msg, original=y2)
def test_binaryop_03(self):
"binaryop test #03"
y1 = larry([1, 2])
y2 = larry([1, 2, 3])
actual = binaryop(np.add, y1, y2, join='inner', missone=0)
desired = larry([2, 4])
msg = "binaryop failed"
ale(actual, desired, msg, original=y1)
ale(actual, desired, msg, original=y2)
def test_binaryop_04(self):
"binaryop test #04"
y1 = larry([1, 2])
y2 = larry([1, 2, 3])
actual = binaryop(np.add, y1, y2, join='inner', missone=0, misstwo=0)
desired = larry([2, 4])
msg = "binaryop failed"
ale(actual, desired, msg, original=y1)
ale(actual, desired, msg, original=y2)
def test_binaryop_05(self):
"binaryop test #05"
y1 = larry([1, 2])
y2 = larry([1, 2, 3])
actual = binaryop(np.add, y1, y2, misstwo=0)
desired = larry([2, 4])
msg = "binaryop failed"
ale(actual, desired, msg, original=y1)
ale(actual, desired, msg, original=y2)
def test_binaryop_06(self):
"binaryop test #06"
y1 = larry([1, 2])
y2 = larry([1, 2, 3])
actual = binaryop(np.add, y1, y2, join='outer')
desired = larry([2, 4, nan])
msg = "binaryop failed"
ale(actual, desired, msg, original=y1)
ale(actual, desired, msg, original=y2)
def test_binaryop_07(self):
"binaryop test #07"
y1 = larry([1, 2])
y2 = larry([1, 2, 3])
actual = binaryop(np.add, y1, y2, join='outer', missone=0)
desired = larry([2, 4, 3], dtype=float)
msg = "binaryop failed"
ale(actual, desired, msg, original=y1)
ale(actual, desired, msg, original=y2)
def test_binaryop_08(self):
"binaryop test #08"
y1 = larry([1, 2])
y2 = larry([1, 2, 3])
actual = binaryop(np.add, y1, y2, join='outer', missone=0, misstwo=0)
desired = larry([2, 4, 3], dtype=float)
msg = "binaryop failed"
ale(actual, desired, msg, original=y1)
ale(actual, desired, msg, original=y2)
def test_binaryop_09(self):
"binaryop test #09"
y1 = larry([1, 2])
y2 = larry([1, 2, 3])
actual = binaryop(np.add, y1, y2, join='outer', misstwo=0)
desired = larry([2, 4, nan])
msg = "binaryop failed"
ale(actual, desired, msg, original=y1)
ale(actual, desired, msg, original=y2)
def test_binaryop_10(self):
"binaryop test #10"
y1 = larry([1, 2])
y2 = larry([1, 2, 3])
actual = binaryop(np.add, y1, y2, join='left')
desired = larry([2, 4])
msg = "binaryop failed"
ale(actual, desired, msg, original=y1)
ale(actual, desired, msg, original=y2)
def test_binaryop_11(self):
"binaryop test #11"
y1 = larry([1, 2])
y2 = larry([1, 2, 3])
actual = binaryop(np.add, y1, y2, join='left', missone=0)
desired = larry([2, 4])
msg = "binaryop failed"
ale(actual, desired, msg, original=y1)
ale(actual, desired, msg, original=y2)
def test_binaryop_12(self):
"binaryop test #12"
y1 = larry([1, 2])
y2 = larry([1, 2, 3])
actual = binaryop(np.add, y1, y2, join='left', missone=0, misstwo=0)
desired = larry([2, 4])
msg = "binaryop failed"
ale(actual, desired, msg, original=y1)
ale(actual, desired, msg, original=y2)
def test_binaryop_13(self):
"binaryop test #13"
y1 = larry([1, 2])
y2 = larry([1, 2, 3])
actual = binaryop(np.add, y1, y2, join='right')
desired = larry([2, 4, nan])
msg = "binaryop failed"
ale(actual, desired, msg, original=y1)
ale(actual, desired, msg, original=y2)
def test_binaryop_14(self):
"binaryop test #14"
y1 = larry([1, 2])
y2 = larry([1, 2, 3])
actual = binaryop(np.add, y1, y2, join='right', missone=0)
desired = larry([2, 4, 3], dtype=float)
msg = "binaryop failed"
ale(actual, desired, msg, original=y1)
ale(actual, desired, msg, original=y2)
def test_binaryop_15(self):
"binaryop test #15"
y1 = larry([1, 2])
y2 = larry([1, 2, 3])
actual = binaryop(np.add, y1, y2, join='right', missone=0, misstwo=0)
desired = larry([2, 4, 3], dtype=float)
msg = "binaryop failed"
ale(actual, desired, msg, original=y1)
ale(actual, desired, msg, original=y2)
def test_binaryop_16(self):
"binaryop test #16"
y1 = larry([1, 2])
y2 = larry([1, 2, 3])
actual = binaryop(np.add, y1, y2, join='right', misstwo=0)
desired = larry([2, 4, nan])
msg = "binaryop failed"
ale(actual, desired, msg, original=y1)
ale(actual, desired, msg, original=y2)
def test_binaryop_17(self):
"binaryop test #17"
y1 = larry([1, nan, nan, 1])
y2 = larry([1, 1, nan, 1], [[0, 1, 2, 'a']])
actual = binaryop(np.add, y1, y2)
desired = larry([2, nan, nan], [[0, 1, 2]])
msg = "binaryop failed"
ale(actual, desired, msg, original=y1)
ale(actual, desired, msg, original=y2)
def test_binaryop_18(self):
"binaryop test #18"
y1 = larry([1, nan, nan, 1])
y2 = larry([1, 1, nan, 1], [[0, 1, 2, 'a']])
actual = binaryop(np.add, y1, y2, join='outer')
desired = larry([2, nan, nan, nan, nan], [[0, 1, 2, 3, 'a']])
msg = "binaryop failed"
ale(actual, desired, msg, original=y1)
ale(actual, desired, msg, original=y2)
def test_binaryop_19(self):
"binaryop test #19"
y1 = larry([1, nan, nan, 1])
y2 = larry([1, 1, nan, 1], [[0, 1, 2, 'a']])
actual = binaryop(np.add, y1, y2, join='outer', missone=0)
desired = larry([2, 1, nan, 1, 1], [[0, 1, 2, 3, 'a']])
msg = "binaryop failed"
ale(actual, desired, msg, original=y1)
ale(actual, desired, msg, original=y2)
def test_binaryop_20(self):
"binaryop test #20"
y1 = larry([1, nan, nan, 1])
y2 = larry([1, 1, nan, 1], [[0, 1, 2, 'a']])
actual = binaryop(np.add, y1, y2, join='outer', missone=0, misstwo=0)
desired = larry([2, 1, 0, 1, 1], [[0, 1, 2, 3, 'a']], dtype=float)
msg = "binaryop failed"
ale(actual, desired, msg, original=y1)
ale(actual, desired, msg, original=y2)
def test_binaryop_21(self):
"binaryop test #21"
y1 = larry([True, True])
y2 = larry([True, False, True])
actual = binaryop(np.logical_and, y1, y2)
desired = larry([True, False])
msg = "binaryop failed"
ale(actual, desired, msg, original=y1)
ale(actual, desired, msg, original=y2)
def test_binaryop_22(self):
"binaryop test #22"
# This is a corner case. The binaryop function uses the align_raw
# function which converts the bool larrys to float since it must
# fill in a missing value. And then logical_and(nan, True) returns
# True.
y1 = larry([True, True])
y2 = larry([True, False, True])
actual = binaryop(np.logical_and, y1, y2, join='outer')
desired = larry([True, False, True])
msg = "binaryop failed"
ale(actual, desired, msg, original=y1)
ale(actual, desired, msg, original=y2)
class Test_add(unittest.TestCase):
"Test la.add()"
def test_add_01(self):
"add test #01"
y1 = larry([1, 2])
y2 = larry([1, 2, 3])
actual = add(y1, y2)
desired = larry([2, 4])
msg = "add failed"
ale(actual, desired, msg, original=y1)
ale(actual, desired, msg, original=y2)
def test_add_02(self):
"add test #02"
y1 = larry([1, 2])
y2 = larry([1, 2, 3])
actual = add(y1, y2, join='inner')
desired = larry([2, 4])
msg = "add failed"
ale(actual, desired, msg, original=y1)
ale(actual, desired, msg, original=y2)
def test_add_03(self):
"add test #03"
y1 = larry([1, 2])
y2 = larry([1, 2, 3])
actual = add(y1, y2, join='inner', missone=0)
desired = larry([2, 4])
msg = "add failed"
ale(actual, desired, msg, original=y1)
ale(actual, desired, msg, original=y2)
def test_add_04(self):
"add test #04"
y1 = larry([1, 2])
y2 = larry([1, 2, 3])
actual = add(y1, y2, join='inner', missone=0, misstwo=0)
desired = larry([2, 4])
msg = "add failed"
ale(actual, desired, msg, original=y1)
ale(actual, desired, msg, original=y2)
def test_add_05(self):
"add test #05"
y1 = larry([1, 2])
y2 = larry([1, 2, 3])