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Footprinting issue #1689

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leecon30 opened this issue Apr 23, 2024 · 0 comments
Open

Footprinting issue #1689

leecon30 opened this issue Apr 23, 2024 · 0 comments
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bug Something isn't working

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@leecon30
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Hi I've been trying to run footprint on my v5 Seurat object and i encounter this issue "Error in loadFUN(x, seqname, ranges) :
trying to load regions beyond the boundaries of non-circular sequence "chr1""

I have read previous threads where this problem was encountered with people for the addMotifs function. Interestingly i have no problem running addMotifs and this only appears when i use the footprinting function. I excluded the peaks found on contigs early on so i dont think that is the issue either.

Can you advise?

Cheers,
Lee
@leecon30 leecon30 added the bug Something isn't working label Apr 23, 2024
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@leecon30