Gene function and cell surface protein association analysis based on single-cell multiomics data

It is a single-cell multiomics data analysis framework that analyzes the association of gene function and cell surface proteins. The python packages, datasets and user-friendly manuals of GFPA are freely available at https://github.com/studentiz/gfpa.

The GFPA framework works with scanpy and supports the following single-cell multimodal analyses

• Single-cell multi-omics data preprocessing
• Quantification of gene function
• Gene function and protein association mining
• Visualization

Pip install

pip install gfpa

Datasets

The dataset participating in "Gene function and cell surface protein association analysis based on single-cell multiomics data" can be downloaded at figshare