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Help pulling docker image into singularity #2349

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GregorySchwing opened this issue Nov 12, 2023 · 0 comments
Closed

Help pulling docker image into singularity #2349

GregorySchwing opened this issue Nov 12, 2023 · 0 comments

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@GregorySchwing
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I built a docker image which automatically has the base environment of a conda environment activated. when I pull this into singularity, singularity doesn't know the path to python.

"/usr/bin/env python" says command not found.

Here is the docker image link

docker pull go2432/openff-toolkit:0.4.2

How do I set up my docker image so this works flawlessly with singularity?

@sylabs sylabs locked and limited conversation to collaborators Nov 13, 2023
@dtrudg dtrudg converted this issue into discussion #2351 Nov 13, 2023

This issue was moved to a discussion.

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