tutorial.rst

Tutorial

what_is_sbml what_is_rr import_roadrunner loading_models running_simulations changing_parameters selecting_output plotting_data changing_initial_conditions solvers jit_engines

Quickstart

To get you started here is a very simple script that will load an example SBML model and run a time course simulation and plot the results.

import roadrunner

# load an SBML model
rr = roadrunner.RoadRunner("mymodel.xml")

# simulate from 0 to 10 time units with 100 output rows
result = rr.simulate(0,10,100)

rr.plot()

Looking for a model to start with? We included a couple with libRoadRunner, see Loading Models.