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  1. SexBiased SexBiased Public

    Shell

  2. popgen_tools popgen_tools Public

    This repository contains scripts that are often used in population genetics analyses (generating the site frequency spectrum or calculating genetic diversity)

    Python 5

  3. ParseGtex ParseGtex Public

    This repo contains scripts for parsing gtex data

    Python 1 1

  4. neoantigens_prioritization neoantigens_prioritization Public

    Prioritize neoantigens based on MHC binding affinity, MHC stability, and tumor abundance

    XSLT

  5. SexChrLab/Cancer_Genomics SexChrLab/Cancer_Genomics Public

    Assembling pipelines for our cancer genomics work. This includes neoepitope identification, and sex difference analyses.

    Python 4

  6. SexChrLab/SexInference SexChrLab/SexInference Public

    Infer sex from DNA sequencing data and RNA sequencing data

    R 2 1