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MIDS Element - 2. Organization #11

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RBGE-Herbarium opened this issue Jan 20, 2021 · 20 comments
Open

MIDS Element - 2. Organization #11

RBGE-Herbarium opened this issue Jan 20, 2021 · 20 comments
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MIDS Element Defines/tracks a MIDS information element that appears at one or more MIDS levels MIDS-0 Info element appears at MIDS level 0 MIDS-1 Info element appears at MIDS level 1 MIDS-2 Info element appears at MIDS level 2 MIDS-3 Info element appears at MIDS level 3 status: accepted in specification Status value of MIDS Element definition

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@RBGE-Herbarium
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RBGE-Herbarium commented Jan 20, 2021

Information Element Name Organization
Modified 08/12/2023
Label Organization
Definition A term to indicate in which institution the specimen is held. This may include an institution code and an institution identifier.
Purpose To allow a user to discover the location of the physical specimen to access additional information or to request access to the physical specimen.
Applicable standard(s)/recommendation(s) It is strongly recommended to include a human readable term and a globally unique persistent and resolvable identifier from GrSciColl, GRID, ROR, etc.
Examples dwc:ownerInstitutionCode : RBGE, dwc:institutionID : https://www.gbif.org/grscicoll/institution/0237598a-853a-492c-af74-a723fe251799; dwc:ownerInstitutionCode : MNHN, dwc:institutionID : https://www.gbif.org/grscicoll/institution/fe534fe7-dccd-4d79-8313-c11b2ea854ab; dwc:ownerInstitutionCode : BZ, dwc:institutionID : https://www.gbif.org/grscicoll/institution/6a6ac6c5-1b8a-48db-91a2-f8661274ff80
Required (Biological/Geological/Paelaeontological) Yes (all)
Constraints When there are multiple identifiers for the organization this term can be repeated as necessary.
Element specification status agreed; accepted in specification
Notes
@RBGE-Herbarium
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RBGE-Herbarium commented Jan 20, 2021

From CETAF DWG meetings:

Should this Include the GRSciCol ID from GBIF or equivalent or should this be the dominant value? Stability issues over plain text name or ID.

@RBGE-Herbarium
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Chat from DiSSCo Prepare OpenDS session:

(Wouter)There is a DwC field for institution referent, which is dwc:institutionID. Issue with that field though is that it includes a recommendation to use an identifier from a collections registry, and cannot capture the type of identifier (GRID, ROR etc)
(Niels)TDWG suggests http://biocol.org/urn:lsid:biocol.org:col:34777. Why cannot https://ror.org/04py0zz23 be used?
(Wouter)@niels it could be used. It is just against the current recommendation.
(Mathias)Even if we don't have institutionIDType, the use of institutionID will resolve quite a bit of ambiguity already compared to institutionCode.

@hardistyar hardistyar added MIDS-0 Info element appears at MIDS level 0 MIDS-1 Info element appears at MIDS level 1 MIDS-2 Info element appears at MIDS level 2 MIDS-3 Info element appears at MIDS level 3 MIDS Element Defines/tracks a MIDS information element that appears at one or more MIDS levels status: not yet discussed Status value of MIDS Element definition labels Jan 20, 2021
@akoivune
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akoivune commented Feb 1, 2021

How this institution code should be used if the physical location of the specimen is different from the institution that is maintaining and storing the data related to it?

@hardistyar hardistyar added status: under discussion Status value of MIDS Element definition and removed status: not yet discussed Status value of MIDS Element definition labels May 6, 2021
@dagendresen
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dwc:institutionID (and dwc:institutionCode) identifies the institution holding the physical specimen, not the custodian of the data. Would not the custodian of the data record be sufficiently described by the dataset metadata?

@wouteraddink why do think that using e ROR identifier as dwc:institutionID is against the current recommendation? The term definition only says the recommended best practice is to use an identifier from a collections registry such as the Global Registry of Biodiversity Repositories

@wouteraddink
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@dagendresen, it could be used, but it is against the current recommendation as ROR is not a collections registry. In my opinion the recommendation should change. ROR is a resolvable persistent global identifier so should be perfectly fine, encouraged even and not be against the recommendation.

@dagendresen
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I see: the words collections registry. Thanks! Completely agree that a ROR ID is much more useful than GrSciColl ID/code.

@tucotuco
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tucotuco commented May 7, 2021 via email

@matdillen
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First attempt at a revised definition after discussion on June 3:

Definition: A unique identity for the specimen's curating institution. Whatever identifier the institution offers to uniquely identify itself, as long as this identifier allows a user to locate (contact?) the institution.

Recommended practice is to provide an ROR identifier. If this is not possible, it is recommended to provide an identifier from another registry, including the registry itself if it is not apparent.

@smrgeoinfo
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If this property is identifying an institution in a particular role (curation), I'd suggest naming the property 'curatingInstitution' so its clear.

@wouteraddink
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I think the role is better defined as data custodian then as curation, also given that we aim to enable community curation of the data. Also note that we now think of using Wikidata for situations where an institution cannot get a ROR. We may add WikiData as possible known referent.

@hardistyar hardistyar added this to the MIDS level 1 proposal milestone Jul 28, 2021
@hardistyar hardistyar added status: agreed Status value of MIDS Element definition status: accepted in specification Status value of MIDS Element definition and removed status: under discussion Status value of MIDS Element definition status: agreed Status value of MIDS Element definition labels Jul 29, 2021
hardistyar added a commit that referenced this issue Jul 29, 2021
Issues #10, #11, #14, #44, #45 agreements carried into text. Proposed draft text to meet milestone [MIDS level 1 proposal](https://github.com/tdwg/mids/milestone/1
@emhaston emhaston changed the title MIDS Element - Institution MIDS Element - InstitutionID May 5, 2022
@emhaston
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emhaston commented May 5, 2022

Discussion from TDWG Task Group meeting (5 May 2022)

Two parts - code + referent
Do we need the referent?
Referent beneficial for machine readability, disambiguation
However adds another layer of complexity in what should be minimum information about a digital specimen
Keep institutionID as it stands, consider institutionCode for perhaps MIDS level 2…?
Maybe separate into two separate elements; one for code, one for the referent?

Based on the discussion at this meeting, the Institution element has been separated into 2 elements. The InstitutionID element was agreed to be included in MIDS-1. More discussion is needed for InstitutionCode but there was a recommendation to include this at MIDS-1 too.

@emhaston
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emhaston commented May 5, 2022

Purpose: to provide a machine readable identifier for where the specimen is held.

@matdillen
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What is the importance of institutionCode if an institutionID is available? I think we just need the ID.

@emhaston emhaston changed the title MIDS Element - InstitutionID MIDS Element - Institution May 29, 2022
@emhaston
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We may want to simplify this term and provide more guidance in the recommendations and mapping.

Proposal: To change the name of this MIDS element to Institution with the following definition and recommendation:

Definition: A term to indicate in which institution the specimen is held. This may include an institution code and an institution identifier.
Recommendation: To include a human readable term and a globally unique persistent identifier from GrSciColl,
GRID, ROR, etc.

DwC mapping: dwc:ownerInstitutionCode; dwc:institutionID

@tucotuco
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Hi folks,

Just a point of information on the Darwin Core mapping. The term dwc:ownerInstitutionCode is meant specifically for ownership, NOT necessarily where the specimen is held. The term for where a specimen is held is dwc:institutionCode which is supposed to be the same institution as the one referenced in dwc:institutionID.

@emhaston
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Thanks for the correction. dwc:institutionCode it is.

@PietrH
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PietrH commented May 30, 2022

Definition: A term to indicate in which institution the specimen is held. This may include an institution code and an institution identifier. Recommendation: To include a human readable term and a globally unique persistent identifier from GrSciColl, GRID, ROR, etc.

The way it's worded now we recommend an institutionCode and an institutionIdentifier, Is this intentional, or is either of these sufficient? Or do we prefer the identifier over the code?

We should strive to provide a good example as well. I can certainly come up with some institutionCode/institutionIdentifier examples for our Meise Botanic Gardens herbarium dataset; BR or https://www.wikidata.org/wiki/Q55829049 or https://www.wikidata.org/wiki/Q3052500 or https://ror.org/01h1jbk91 or http://biocol.org/urn:lsid:biocol.org:col:15605 or MeiseBG, the list goes on!

@emhaston
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emhaston commented Jun 1, 2022

The recommendation of both is intentional with the idea that we would be recommending a human readable and a globally unique identifier. There has been strong recommendations for both of these pieces of information for different use cases and I think that we should be recommending both. However, both are not required in this proposal and either one would potentially satisfy the element of Institution.

@emhaston emhaston changed the title MIDS Element - Institution MIDS Element - Organization Jun 2, 2022
@emhaston
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emhaston commented Jun 2, 2022

Task Group meeting (2 June 2022)
Notes for this element:
Institution - Simplify institution to a single element with a recommendation that people include a human readable term and a PID.
Risk that institutions will not use this properly if it is just in recommendation
Would need very clear recommendations and examples
Difficult to manage the requirements/quality within this framework
Change to Organisation (Schema.org)

Decision:
To change name to Organization (maps exactly to schema.org/Organization.
To include in all MIDS levels
To include as a 'generic' element in MIDS-0 and MIDS-1 with a recommendation to include a human readable code and a globally unique persistent identifier.
Further discussion required for MIDS-2 and MIDS-3

@emhaston emhaston removed the status: agreed Status value of MIDS Element definition label Sep 1, 2022
@emhaston emhaston changed the title MIDS Element - Organization MIDS Element - 2. Organization Oct 6, 2022
@emhaston
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emhaston commented Oct 6, 2022

Add wikidata mapping.

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MIDS Element Defines/tracks a MIDS information element that appears at one or more MIDS levels MIDS-0 Info element appears at MIDS level 0 MIDS-1 Info element appears at MIDS level 1 MIDS-2 Info element appears at MIDS level 2 MIDS-3 Info element appears at MIDS level 3 status: accepted in specification Status value of MIDS Element definition
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