Delete baseline pvalue from correction method input #1132
Workflow file for this run
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| # This workflow will install Python dependencies, run tests and lint with a variety of Python versions | |
| # For more information see: https://help.github.com/actions/language-and-framework-guides/using-python-with-github-actions | |
| name: Continuous Testing | |
| on: | |
| push: | |
| branches: [ master ] | |
| pull_request: | |
| branches: [ master ] | |
| jobs: | |
| build: | |
| strategy: | |
| matrix: | |
| python-version: ['3.8', '3.11'] | |
| java: [11, 13] | |
| os: ['ubuntu-latest', 'macos-13', 'windows-latest'] | |
| terrier: ['snapshot'] #'5.3', '5.4-SNAPSHOT', | |
| include: | |
| - os: 'macos-latest' | |
| python-version: '3.9' | |
| java: 11 | |
| terrier: 'snapshot' | |
| runs-on: ${{ matrix.os }} | |
| steps: | |
| - name: Setup dependencies for xgBoost on macOs-latest | |
| if: matrix.os == 'macOs-latest' | |
| run: | | |
| brew install libomp | |
| - uses: actions/checkout@v4 | |
| - name: Set up Python ${{ matrix.python-version }} | |
| if: matrix.os != 'self-hosted' | |
| uses: actions/setup-python@v5 | |
| with: | |
| python-version: ${{ matrix.python-version }} | |
| - name: Setup java | |
| if: matrix.os != 'self-hosted' | |
| uses: actions/setup-java@v4 | |
| with: | |
| java-version: ${{ matrix.java }} | |
| distribution: 'zulu' | |
| - name: Install Terrier snapshot | |
| if: matrix.terrier == '5.4-SNAPSHOT' | |
| run: | | |
| git clone https://github.com/terrier-org/terrier-core.git | |
| cd terrier-core | |
| mvn -B -DskipTests install | |
| # follows https://medium.com/ai2-blog/python-caching-in-github-actions-e9452698e98d | |
| - name: Loading Python & dependencies from cache | |
| if: matrix.os != 'self-hosted' | |
| uses: actions/cache@v4 | |
| with: | |
| path: ${{ env.pythonLocation }} | |
| key: ${{ runner.os }}-${{ env.pythonLocation }}-${{ hashFiles('requirements.txt') }}-${{ hashFiles('requirements-test.txt') }} | |
| - name: Install Python dependencies | |
| run: | | |
| python -m pip install --upgrade pip | |
| pip install --upgrade --upgrade-strategy eager -r requirements.txt | |
| pip install --upgrade --upgrade-strategy eager -r requirements-test.txt | |
| #install this software | |
| pip install --timeout=120 . | |
| pip install pytest | |
| - name: Lint with flake8 | |
| run: | | |
| #pip install flake8 | |
| # stop the build if there are Python syntax errors or undefined names | |
| #flake8 . --count --select=E9,F63,F7,F82 --show-source --statistics | |
| # exit-zero treats all errors as warnings. The GitHub editor is 127 chars wide | |
| #flake8 . --count --exit-zero --max-complexity=10 --max-line-length=127 --statistics | |
| - name: Flash unit tests | |
| env: | |
| TERRIER_VERSION: ${{ matrix.terrier }} | |
| run: | | |
| pytest -p no:faulthandler tests/test_flash.py | |
| # Hide underlying Jnius problem by disabling faulthandler: https://github.com/pytest-dev/pytest/issues/7634 | |
| - name: All unit tests | |
| env: | |
| TERRIER_VERSION: ${{ matrix.terrier }} | |
| run: | | |
| pytest --durations=20 -p no:faulthandler |