SSU Diatom Classifier v1.0.1

New release to activate Zenodo DOI.

SSU Diatom Classifier v1.0

This classifier was developed to classify Diatom SSU rDNA sequences and is based on diatom barcode sequences from (Rimet et al., 2016). This release contains the files ready to be used with the RDP Classifier 2.12 (Wang et al., 2007). Decompressed file size is ~ 24 Mb.

Sequences were obtained from R-syst::diatom [Feb. 11/20].

SSU Diatom Classifier v1.0-ref

This reference set was developed to classify Diatom SSU rDNA sequences and is based on diatom barcode sequences from R-Syst::diatom (Rimet et al., 2016). This release contains the original FASTA and taxonomy files that were used to train the RDP Classifier 2.12 (Wang et al., 2007). These files are included here for reference only. Decompressed file size is ~ 4.3 Mb.