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Fix panic on concurrent index-header lazy reader usage and unload #3760

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pracucci
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@pracucci pracucci commented Feb 1, 2021

  • I added CHANGELOG entry for this change.
  • Change is not relevant to the end user.

Changes

The LazyBinaryReader can be unloaded at any time. When it gets unloaded, the values returned by its functions (eg. LabelValues()) are no more valid because they're yolo strings whose underlying buffer is released (and file unmmaped) on unload().

I would guess this not to be a real issue assuming a long enough idle timeout. For example, if the idle timeout is 20 minutes, the values returned by the LazyBinaryReader needs to be around for 20 minutes before it panics, which is currently not the case.

However, the combination of ReaderPool and LazyBinaryReader doesn't guarantee that unload() is always executed on idle readers. It may happen that a reader which is idle gets returned by ReaderPool.getIdleReaders() and gets used right before calling LazyBinaryReader.unload(), causing a panic like this (line numbers match with Thanos at commit 2f7d37d7368cce61ee028a27c2a4a21f9d8fe552):

unexpected fault address 0x7f3e16fe7905
fatal error: fault
[signal SIGSEGV: segmentation violation code=0x1 addr=0x7f3e16fe7905 pc=0x4020ac]

goroutine 10902586 [running]:
runtime.throw(0x2533220, 0x5)
	/usr/local/go/src/runtime/panic.go:1116 +0x72 fp=0xc0e3094f38 sp=0xc0e3094f08 pc=0x434de2
runtime.sigpanic()
	/usr/local/go/src/runtime/signal_unix.go:702 +0x3cc fp=0xc0e3094f68 sp=0xc0e3094f38 pc=0x44bb8c
cmpbody()
	/usr/local/go/src/internal/bytealg/compare_amd64.s:115 +0xec fp=0xc0e3094f70 sp=0xc0e3094f68 pc=0x4020ac
github.com/thanos-io/thanos/pkg/block/indexheader.BinaryReader.postingsOffset(0x2b73f00, 0xc1182fc5a0, 0xc114ce36d0, 0x2b44ce0, 0xc1182fc560, 0xc0b4452180, 0x0, 0xc0d7977140, 0xc10c1ba420, 0xc353b7c190, ...)
	/__w/cortex/cortex/vendor/github.com/thanos-io/thanos/pkg/block/indexheader/binary_reader.go:696 +0xe54 fp=0xc0e30950e8 sp=0xc0e3094f70 pc=0x18f5b94
github.com/thanos-io/thanos/pkg/block/indexheader.BinaryReader.PostingsOffset(0x2b73f00, 0xc1182fc5a0, 0xc114ce36d0, 0x2b44ce0, 0xc1182fc560, 0xc0b4452180, 0x0, 0xc0d7977140, 0xc10c1ba420, 0xc353b7c190, ...)
	/__w/cortex/cortex/vendor/github.com/thanos-io/thanos/pkg/block/indexheader/binary_reader.go:646 +0xbf fp=0xc0e30951c8 sp=0xc0e30950e8 pc=0x18f4b6f
github.com/thanos-io/thanos/pkg/block/indexheader.(*LazyBinaryReader).PostingsOffset(0xc00bf6d4a0, 0xc020951520, 0x15, 0x7f3e16fe7905, 0x14, 0x0, 0x0, 0x0, 0x0)
	/__w/cortex/cortex/vendor/github.com/thanos-io/thanos/pkg/block/indexheader/lazy_binary_reader.go:162 +0x1b3 fp=0xc0e3095318 sp=0xc0e30951c8 pc=0x18f7db3
github.com/thanos-io/thanos/pkg/store.(*bucketIndexReader).fetchPostings(0xc00b6e1c80, 0xc093896e00, 0x5, 0x8, 0x0, 0x0, 0x0, 0x0, 0x0)
	/__w/cortex/cortex/vendor/github.com/thanos-io/thanos/pkg/store/bucket.go:1783 +0xb01 fp=0xc0e3095578 sp=0xc0e3095318 pc=0x199db71
github.com/thanos-io/thanos/pkg/store.(*bucketIndexReader).ExpandedPostings(0xc00b6e1c80, 0xc00b9642e0, 0x2, 0x2, 0xc182bf6120, 0x253113a, 0x3, 0x2bb7920, 0x0)
	/__w/cortex/cortex/vendor/github.com/thanos-io/thanos/pkg/store/bucket.go:1601 +0x5ac fp=0xc0e3095818 sp=0xc0e3095578 pc=0x199b68c
github.com/thanos-io/thanos/pkg/store.blockSeries(0xc00933edb0, 0xc00b6e1c80, 0xc11d7a3f80, 0xc00b9642e0, 0x2, 0x2, 0xc11d7a2540, 0x2b44f80, 0xc02b22f530, 0x125fde00, ...)
	/__w/cortex/cortex/vendor/github.com/thanos-io/thanos/pkg/store/bucket.go:687 +0x6a fp=0xc0e3095d00 sp=0xc0e3095818 pc=0x19931ba
github.com/thanos-io/thanos/pkg/store.(*BucketStore).Series.func2(0x125ff840, 0x125ff8a0)
	/__w/cortex/cortex/vendor/github.com/thanos-io/thanos/pkg/store/bucket.go:938 +0xbe fp=0xc0e3095f78 sp=0xc0e3095d00 pc=0x19a373e
golang.org/x/sync/errgroup.(*Group).Go.func1(0xc02b22f4d0, 0xc0829de0e0)
	/__w/cortex/cortex/vendor/golang.org/x/sync/errgroup/errgroup.go:57 +0x59 fp=0xc0e3095fd0 sp=0xc0e3095f78 pc=0x997bc9
runtime.goexit()
	/usr/local/go/src/runtime/asm_amd64.s:1373 +0x1 fp=0xc0e3095fd8 sp=0xc0e3095fd0 pc=0x467ca1
created by golang.org/x/sync/errgroup.(*Group).Go
	/__w/cortex/cortex/vendor/golang.org/x/sync/errgroup/errgroup.go:54 +0x66

This PR is not a definitive fix, in the sense that the values returned by LazyIndexHeader can potentially become invalid any time, but mitigates the issue fixing the race condition between ReaderPool and LazyBinaryReader guaranteeing that unload() is always executed on a idle reader.

Verification

Unit tests (but this specific race condition is hard to reproduce with a test).

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Great job finding an explanation for this panic! It makes sense in retrospect, but is super tricky to spot.

yolo strings are dangerous :(

pkg/block/indexheader/reader_pool.go Outdated Show resolved Hide resolved
pkg/block/indexheader/lazy_binary_reader.go Outdated Show resolved Hide resolved
pkg/block/indexheader/lazy_binary_reader.go Outdated Show resolved Hide resolved
pkg/block/indexheader/lazy_binary_reader.go Outdated Show resolved Hide resolved
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pracucci commented Feb 1, 2021

Thanks @pstibrany for the quick review. I've addressed your comments.

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Looks good & the code seems clean. Great work 💪 However, it seems like quay is having problems? :s

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Well spotted, thanks.

Only minor nits, not blocking.

return r.usedAt.Load()
// isLoaded returns true if the underlying index-header reader is currently loaded.
func (r *LazyBinaryReader) isLoaded() bool {
r.readerMx.RLock()
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I think this function is nice if it would be used more times than once, otherwise it might be just confusing. (It brings question why one method is mutex, another not).

Maybe inlining it would be better?

Not a blocker.

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Good point. Inlined.

pkg/block/indexheader/reader_pool.go Outdated Show resolved Hide resolved
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bwplotka commented Feb 1, 2021

e2e blocked on #3762

Signed-off-by: Marco Pracucci <marco@pracucci.com>
Signed-off-by: Marco Pracucci <marco@pracucci.com>
Signed-off-by: Marco Pracucci <marco@pracucci.com>
@pracucci pracucci force-pushed the ensure-an-user-index-header-is-never-closed branch from 4e71cae to f5ce68a Compare February 2, 2021 07:56
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pracucci commented Feb 2, 2021

Thanks a lot @bwplotka and @GiedriusS for your super quick review. I should have addressed your comments and rebased master after merging #3762.

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LGTM!

Thanks 💪🏽

@bwplotka bwplotka merged commit a24acb6 into thanos-io:master Feb 2, 2021
@pracucci pracucci deleted the ensure-an-user-index-header-is-never-closed branch February 2, 2021 09:48
openshift-merge-robot pushed a commit to stolostron/thanos that referenced this pull request Apr 12, 2021
* CHANGELOG.md: add v0.16.0 link (thanos-io#3697)

This small commit fixes the changelog entry for release v0.16.0 so that
the section title includes a link to the actual release.

Signed-off-by: Lucas Servén Marín <lserven@gmail.com>

* Delete deletion-mark.json at last when deleting a block (thanos-io#3661)

* Delete deletion-mark.json at last when deleting a block

Signed-off-by: Marco Pracucci <marco@pracucci.com>

* Fixed linter

Signed-off-by: Marco Pracucci <marco@pracucci.com>

* fixed broken links (thanos-io#3645)

Signed-off-by: Namanl2001 <namanlakhwani@gmail.com>

* chore(tutorials): fix some broken links in 2-lts (thanos-io#3702)

Signed-off-by: Bradley <bwilsonhunt@gmail.com>

* Fix race condition in BinaryReader.LookupSymbol() (thanos-io#3705)

* Fix race condition in BinaryReader.LookupSymbol()

Signed-off-by: Marco Pracucci <marco@pracucci.com>

* Fixed BinaryReader receiver and added CHANGELOG entry

Signed-off-by: Marco Pracucci <marco@pracucci.com>

* ui: make old bucket viewer UI work with vanilla blocks (thanos-io#3700)

* ui: make old UI work with vanilla blocks

Make the old bucket viewer UI work with vanilla Prometheus blocks by
checking whether the `Thanos` part exists before formatting the HTML.

Signed-off-by: Giedrius Statkevičius <giedriuswork@gmail.com>

* CHANGELOG: update

Signed-off-by: Giedrius Statkevičius <giedriuswork@gmail.com>

* ui/bucket: fix according to @squat's suggestions

Signed-off-by: Giedrius Statkevičius <giedriuswork@gmail.com>

* ui: update bindata after latest changes

Signed-off-by: Giedrius Statkevičius <giedriuswork@gmail.com>

* Query-frontend CMD: use detailed text description

Signed-off-by: dmaiocchi <sodar@riseup.net>
Co-authored-by: Bartlomiej Plotka <bwplotka@gmail.com>

* Upgrade Cortex and remove SwiftConfig (thanos-io#3708)

Signed-off-by: Marco Pracucci <marco@pracucci.com>

* chore(deps): upgrading hugo (v0.80.0) fixes thanos-io#3653 (thanos-io#3714)

Signed-off-by: Bradley <bwilsonhunt@gmail.com>

* store: Make more S3 http.Transport settings configurable. (thanos-io#3657)

The http.Transport is not auto-tuning and one size does not seem to fit
all cases. In order to respond to a query a store gateway might need to
fetch a large (thousands) of postings, series and chunks.

While the number of idle connections has been increased recently it can
still be too low or expose bursty (opening, closing) behavior. Allow to
tune most of the http.Transport parameters. I considered embedding the
full Transport but there is already a Transport member.

Signed-off-by: Holger Hans Peter Freyther <holger@freyther.de>

* added definiton of chunk and referenced it in the docs (thanos-io#3629)

* Update design.md

Update store.md

Update design.md

Update storage.md

Update troubleshooting.md

Signed-off-by: Biswajit Ghosh <biswajitghosh98@iitkgp.ac.in>

* Update design.md

Update store.md

Update design.md

Update troubleshooting.md

Update storage.md

Signed-off-by: Biswajit Ghosh <biswajitghosh98@iitkgp.ac.in>

* Upgraded to newest bingo. (thanos-io#3718)

Signed-off-by: Bartlomiej Plotka <bwplotka@gmail.com>

* Update help messages with a consistent use of capitals and periods. (thanos-io#3727)

* Update help messages with a consistent use of capitals and periods.

Signed-off-by: Matt Whitney <mattjwhitney@gmail.com>

* Update documentation to reflect message changes.

Signed-off-by: Matt Whitney <mattjwhitney@gmail.com>

* Run `make docs` to correct the documentation rather than manual edits.

Signed-off-by: Matt Whitney <mattjwhitney@gmail.com>

* docs: update examples/dashboards/dashboards.md (thanos-io#3733)

Signed-off-by: Mert Acikportali <mertacikportali@gmail.com>

* pkg/errutil: correct the multierror file suffix (thanos-io#3736)

This commit changes the file suffix from .go.go to simply .go.

Signed-off-by: Lucas Servén Marín <lserven@gmail.com>

* Fixed website and added new step for release process (tmp). (thanos-io#3738)

Signed-off-by: Bartlomiej Plotka <bwplotka@gmail.com>

* api: Added Proposal for Discovery Endpoint idea (InfoAPI) (thanos-io#3703)

* docs/proposals/210701_endpoint_discovery.md: Add initial proposal

Signed-off-by: Lili Cosic <cosiclili@gmail.com>

* Update docs/proposals/210701_endpoint_discovery.md

Co-authored-by: Bartlomiej Plotka <bwplotka@gmail.com>

Co-authored-by: Bartlomiej Plotka <bwplotka@gmail.com>

* Introduce "block-meta-fetch-concurrency" flag for compact and store (thanos-io#3752)

* Introduce "block-meta-fetch-concurrency" flag for compact and store

Furthermore consolidate the fetcher concurrency by moving the
fetcherConcurrency const to the fetcher code of the block package.

Signed-off-by: Johannes Frey <johannes.frey@daimler.com>

* Document flags

Signed-off-by: Johannes Frey <johannes.frey@daimler.com>

* Add `--query-range.request-downsampled` flag to Query Frontend (thanos-io#2641) (thanos-io#3723)

* Add `--query-range.request-downsampled` flag to Query Frontend (thanos-io#2641)

Signed-off-by: Vladimir Kononov <krya-kryak@users.noreply.github.com>

* Apply suggestions from code review

Co-authored-by: Bartlomiej Plotka <bwplotka@gmail.com>
Signed-off-by: Vladimir Kononov <krya-kryak@users.noreply.github.com>

Co-authored-by: Bartlomiej Plotka <bwplotka@gmail.com>

* Pinned to newer busybox on quay. (thanos-io#3762)

Signed-off-by: Bartlomiej Plotka <bwplotka@gmail.com>

* Fix panic on concurrent index-header lazy reader usage and unload (thanos-io#3760)

* Fix panic on concurrent index-header lazy reader usage and unload

Signed-off-by: Marco Pracucci <marco@pracucci.com>

* Addressed review comments

Signed-off-by: Marco Pracucci <marco@pracucci.com>

* Addressed review comments

Signed-off-by: Marco Pracucci <marco@pracucci.com>

* Fixed Planner.Plan() description (thanos-io#3767)

Signed-off-by: Marco Pracucci <marco@pracucci.com>

* Fixed panic on concurrent index-header lazy load / unload (thanos-io#3759)

Signed-off-by: Marco Pracucci <marco@pracucci.com>

* Pad compaction planner size check (thanos-io#3773)

Pad the index size check in the compaction planner by 15% to avoid
situations where the sum of index bytes bloats to be larger than the
sum of the original index sizes.

* thanos-io#3724
* thanos-io#3750

Signed-off-by: Ben Kochie <superq@gmail.com>

* pkg/server/http: Allow passing http.ServeMux with a server option (thanos-io#3769)

Signed-off-by: Matthias Loibl <mail@matthiasloibl.com>

* Update Katacoda Official Link (thanos-io#3768)

Signed-off-by: soniasingla <soniasingla.1812@gmail.com>

* Nomitate kakkoyun for the v0.20.0 release (thanos-io#3778)

Signed-off-by: Kemal Akkoyun <kakkoyun@gmail.com>

* Fix typo in query component documentation for store api link (thanos-io#3675)

* Fix wrong store api link

Signed-off-by: Junyoung, Sung <junyoung.sung@navercorp.com>

* Fix store api link to absolute

Signed-off-by: Junyoung, Sung <junyoung.sung@navercorp.com>

* e2e: Resolved Flaky tests (thanos-io#3777)

* added retry function

Signed-off-by: Abhishek357 <abhisheksinghchauhan357@gmail.com>

* fixed CI test

Signed-off-by: Abhishek357 <abhisheksinghchauhan357@gmail.com>

* restructured code

Signed-off-by: Abhishek357 <abhisheksinghchauhan357@gmail.com>

* Add an exempt label to ignore issue that has a PR

Signed-off-by: Kemal Akkoyun <kakkoyun@gmail.com>

* in memory cache for caching bucket (thanos-io#3579)

* in memeory cache for caching bucket

Signed-off-by: Sudharshann D <sudhar287@gmail.com>

* addressing comments

Signed-off-by: Sudharshann D <sudhar287@gmail.com>

* Introduce "allow overlapping blocks" flag for Thanos receiver (thanos-io#3792)

* add tsdb.allow-overlapping-blocks flag to receiver

Signed-off-by: Max Chandler <max_chandler@apple.com>

* make format

Signed-off-by: Max Chandler <max_chandler@apple.com>

* cleanup whitespace

Signed-off-by: Max Chandler <max_chandler@apple.com>

* cleanup whitespace

Signed-off-by: Max Chandler <max_chandler@apple.com>

* make docs

Signed-off-by: Max Chandler <max_chandler@apple.com>

* fix changelog conflict

Signed-off-by: Max Chandler <max_chandler@apple.com>

Co-authored-by: Matt Lawrence <m.law@apple.com>

* Reduce memory allocations in bucketBlock.readChunkRange() (thanos-io#3796)

Signed-off-by: Marco Pracucci <marco@pracucci.com>

* update prometheus version

Signed-off-by: Mauro Stettler <mauro.stettler@gmail.com>

* update cortex

Signed-off-by: Mauro Stettler <mauro.stettler@gmail.com>

* add new property to LabelValuesRequest

Signed-off-by: Mauro Stettler <mauro.stettler@gmail.com>

* set label matchers in LabelValueRequest

Signed-off-by: Mauro Stettler <mauro.stettler@gmail.com>

* make docs

Signed-off-by: Mauro Stettler <mauro.stettler@gmail.com>

* Allow to customise S3 SSE on a per-request basis (thanos-io#3783)

* Allow to customise S3 SSE on a per-request basis

Signed-off-by: Marco Pracucci <marco@pracucci.com>

* Addressed review comments

Signed-off-by: Marco Pracucci <marco@pracucci.com>

* Refactoring: allow to pass BytesPool to store.NewBucketStore() (thanos-io#3801)

Signed-off-by: Marco Pracucci <marco@pracucci.com>

* Allow to customise the partitioner used by the BucketStore (thanos-io#3802)

Signed-off-by: Marco Pracucci <marco@pracucci.com>

* Fix button display when there is no panels (thanos-io#3694)

Signed-off-by: Namanl2001 <namanlakhwani@gmail.com>

* fix tests

Signed-off-by: Mauro Stettler <mauro.stettler@gmail.com>

* Allow downstream projects to customise the Partitioner (thanos-io#3808)

Signed-off-by: Marco Pracucci <marco@pracucci.com>

* Makefile: Fix to command to find React source files (thanos-io#3805)

Signed-off-by: Hitanshu Mehta <hitanshu99amehta@gmail.com>

* Merge release 0.18 (thanos-io#3809)

* CHANGELOG.md: release v0.18.0

Signed-off-by: Lucas Servén Marín <lserven@gmail.com>

* VERSION,tutorials: bump versions

Signed-off-by: Lucas Servén Marín <lserven@gmail.com>

* Revert "VERSION,tutorials: bump versions"

This reverts commit 5a27c70.
The "thanos:" prefix for the container images was accidentally removed.

Signed-off-by: Lucas Servén Marín <lserven@gmail.com>

* VERSION,tutorials: bump version for all images

Signed-off-by: Lucas Servén Marín <lserven@gmail.com>

* CHANGELOG: bump release date

Signed-off-by: Lucas Servén Marín <lserven@gmail.com>

* pkg/rules/proxy: fix hotlooping when receiving client errors

Currently, if we receive an error from the underlying client stream,
we continue with trying to receive additional data.
This causes a hotloop as we will receive the same error again.
This fixes it by returning in the error case and adds a unit test for the proxy logic.

Fixes thanos-io#3717

Signed-off-by: Sergiusz Urbaniak <sergiusz.urbaniak@gmail.com>

* CHANGELOG.md: fix changelog to incorporate new fix (thanos-io#3737)

This commit fixes the order of the changelog to properly reflect a
recent change.

Signed-off-by: Lucas Servén Marín <lserven@gmail.com>

* Fixed website and added new step for release process (tmp). (thanos-io#3738)

Signed-off-by: Bartlomiej Plotka <bwplotka@gmail.com>

* CHANGELOG.md: update v0.18.0 release date

Signed-off-by: Lucas Servén Marín <lserven@gmail.com>

Co-authored-by: Sergiusz Urbaniak <sergiusz.urbaniak@gmail.com>
Co-authored-by: Bartlomiej Plotka <bwplotka@gmail.com>

* reloader: try to fix test flakiness (thanos-io#3798)

This is an attempt of fixing the `TestReloader_DirectoriesApply` test
flakiness. I call this an attempt because I cannot reproduce it locally.
However, I have noticed that during runs where this fails the logs look
like this:

```
--- FAIL: TestReloader_DirectoriesApply (3.04s)
    reloader_test.go:256: Performing step number 0
    reloader_test.go:256: Performing step number 1
    reloader_test.go:256: Performing step number 2
    reloader_test.go:256: Performing step number 3
    reloader_test.go:256: Performing step number 4
    reloader_test.go:256: Performing step number 6
    reloader_test.go:343: reloader_test.go:343:

        	exp: 5

        	got: 6
```

It immediately jumps to another value. This gave me a hint and I think
that this is happening because potentially `i` can be written to/read
from by multiple goroutines. On very resource constrained systems like
the CircleCI runners, it could just happen that the `if` doesn't do what
it is supposed to.

Try to fix this problem by protecting the whole HTTP handler with a
mutex. Since this is only a test and not a performance critical path, I
think this is a reasonable change to do.

Add extra check for reload failures.

Signed-off-by: Giedrius Statkevičius <giedriuswork@gmail.com>

* addressing PR comments

Signed-off-by: Mauro Stettler <mauro.stettler@gmail.com>

* Block Viewer: Move overlapping blocks to separate rows (thanos-io#3729)

* Block Viewer: overlapping blocks issue resolved

Signed-off-by: Namanl2001 <namanlakhwani@gmail.com>

* small changes and make assets

Signed-off-by: Namanl2001 <namanlakhwani@gmail.com>

* Add flag to set default step

Signed-off-by: Hitanshu Mehta <hitanshu99amehta@gmail.com>

* Add support to use default step in classic ui

Signed-off-by: Hitanshu Mehta <hitanshu99amehta@gmail.com>

* Add support to use default step in new ui

Signed-off-by: Hitanshu Mehta <hitanshu99amehta@gmail.com>

* Lint fixes

Signed-off-by: Hitanshu Mehta <hitanshu99amehta@gmail.com>

* change ParseStep function to be consistent with ui

Signed-off-by: Hitanshu Mehta <hitanshu99amehta@gmail.com>

* Improve description of query.default-step flag

Signed-off-by: Hitanshu Mehta <hitanshu99amehta@gmail.com>

* Minor fixes

Signed-off-by: Hitanshu Mehta <hitanshu99amehta@gmail.com>

* Use default value when  flag is undefined

Signed-off-by: Hitanshu Mehta <hitanshu99amehta@gmail.com>

* minor fixes

Signed-off-by: Hitanshu Mehta <hitanshu99amehta@gmail.com>

* Minor fixes

Signed-off-by: Hitanshu Mehta <hitanshu99amehta@gmail.com>

* Update changelog

Signed-off-by: Hitanshu Mehta <hitanshu99amehta@gmail.com>

* Fix typo

Signed-off-by: Hitanshu Mehta <hitanshu99amehta@gmail.com>

* Receive: Improve handling of empty time series from clients (thanos-io#3815)

* exit early if a request has no timeseries data

Signed-off-by: Matt Lawrence <m.law@apple.com>
Co-authored-by: Max Chandler <max_chandler@apple.com>

* update changelog

Signed-off-by: Matt Lawrence <m.law@apple.com>

* update changelog

Signed-off-by: Matt Lawrence <m.law@apple.com>

* Move constant to right side of comparison

Co-authored-by: Lucas Servén Marín <lserven@gmail.com>
Signed-off-by: Matt Lawrence <m.law@apple.com>

Co-authored-by: Max Chandler <max_chandler@apple.com>
Co-authored-by: Lucas Servén Marín <lserven@gmail.com>

* Reduced allocated memory by chunks reader in the store gateway at query time (thanos-io#3814)

* Reduced allocated memory by chunks reader in the store gateway at query time

Signed-off-by: Marco Pracucci <marco@pracucci.com>

* Fixed linter issues

Signed-off-by: Marco Pracucci <marco@pracucci.com>

* Fixed linter (hopefully)

Signed-off-by: Marco Pracucci <marco@pracucci.com>

* Renamed function

Signed-off-by: Marco Pracucci <marco@pracucci.com>

* Updated comment

Signed-off-by: Marco Pracucci <marco@pracucci.com>

* Updated code comment

Signed-off-by: Marco Pracucci <marco@pracucci.com>

* promclient: fix error's message (thanos-io#3824)

Use the provided `method` in the error messages. I got scared reading
the logs that the requests are still being sent using GET instead of
POST which I had specified.

Signed-off-by: Giedrius Statkevičius <giedriuswork@gmail.com>

* pkg/ui/react-app: update dependencies (thanos-io#3818)

Fix lodash security issue.

Signed-off-by: Simon Pasquier <spasquie@redhat.com>

* Add objstore.List() recursive support (thanos-io#3823)

* Add objstore.List() recursive support

Signed-off-by: Marco Pracucci <marco@pracucci.com>

* Fixed CachingBucket

Signed-off-by: Marco Pracucci <marco@pracucci.com>

* Fix Cortex compilation issue

Signed-off-by: Marco Pracucci <marco@pracucci.com>

* Tidy go.mod/sum

Signed-off-by: Marco Pracucci <marco@pracucci.com>

* Fix linter

Signed-off-by: Marco Pracucci <marco@pracucci.com>

* Fixed TestMetricBucket_Close

Signed-off-by: Marco Pracucci <marco@pracucci.com>

* Upgraded Cortex

Signed-off-by: Marco Pracucci <marco@pracucci.com>

* Inlined struct initialisation

Signed-off-by: Marco Pracucci <marco@pracucci.com>

* Upgrade Cortex again

Signed-off-by: Marco Pracucci <marco@pracucci.com>

* Upgrade Cortex (thanos-io#3828)

Signed-off-by: Marco Pracucci <marco@pracucci.com>

* Truncated S3 "get object" response is reported as error (thanos-io#3795)

* Add test to ensure S3 truncated response is an error

Signed-off-by: Marco Pracucci <marco@pracucci.com>

* Added missing copyright

Signed-off-by: Marco Pracucci <marco@pracucci.com>

* Upgraded Minio

Signed-off-by: Marco Pracucci <marco@pracucci.com>

* Upgraded Minio again

Signed-off-by: Marco Pracucci <marco@pracucci.com>

* Implement federated metric metadata API (thanos-io#3686)

* support federated metadata API

Signed-off-by: Ben Ye <yb532204897@gmail.com>

* update comments

Signed-off-by: yeya24 <yb532204897@gmail.com>

* use parseInt

Signed-off-by: yeya24 <yb532204897@gmail.com>

* address Prem's comments

Signed-off-by: yeya24 <yb532204897@gmail.com>

* update proto comment

Signed-off-by: yeya24 <yb532204897@gmail.com>

* add changelog

Signed-off-by: yeya24 <yb532204897@gmail.com>

* Fixed TestBucketStore_ManyParts_e2e (thanos-io#3841)

https://app.circleci.com/pipelines/github/thanos-io/thanos/5120/workflows/efd2a21d-13b7-4035-99e3-cb1af8023694/jobs/13809

This fail is only visible for anyone from Thanos Team proposing PR, due
to extra tests against bucket providers.

Signed-off-by: Bartlomiej Plotka <bwplotka@gmail.com>

* Reinforcing errutil and fixed ugly bug which caused empty []error to te treated as error, (thanos-io#3836)

Previous multi-error implementation could cause very ugly bug of returnig empty multi-error
that should be treated as success not error by API, but if .Err() is not invoked it will be
used as non nil error.

Once we merge this, we can do cleaner solution that slighly change nesting behaviour: thanos-io#3833

There were 9 places where we had this bug in handler due to MultiError lib allowing to do so.

Signed-off-by: Bartlomiej Plotka <bwplotka@gmail.com>

* Export metadata fetcher metrics (thanos-io#3660)

Signed-off-by: Marco Pracucci <marco@pracucci.com>

* store: Cleaned up API for test/benchmark purposes. (thanos-io#3650)

Signed-off-by: Bartlomiej Plotka <bwplotka@gmail.com>

* Allow Cortex to fully reuse FetcherMetrics (thanos-io#3842)

Signed-off-by: Marco Pracucci <marco@pracucci.com>

* downsample: ensure consistent order (thanos-io#3843)

Ensure that we have a consistent order of blocks that we are going to
downsample. `range` over maps doesn't enforce any particular order on
purpose.

This is needed for https://github.com/thanos-io/thanos/pull/3031/files.
ATM in that PR before downsampling we delete all directories which do
not match blocks ULIDs in the remote object storage. Ideally, we should
only keep around the files of a block which we are about to downsample.

It is impossible to do that properly ATM if during another iteration
we'd start from a different block. Thus, let's have a consistent order.

Signed-off-by: Giedrius Statkevičius <giedriuswork@gmail.com>

* [Fix] Replace unsupported %v macro in logs (thanos-io#3847)

Signed-off-by: Stéphane Brillant <stephane.brillant@jive.com>

* Update ui npm dependencies to latest versions (thanos-io#3813)

* Update ui npm deps to latest

Signed-off-by: Saswata Mukherjee <saswataminsta@yahoo.com>

* Fix linting errors

Signed-off-by: Saswata Mukherjee <saswataminsta@yahoo.com>

* Change camelcase lint rule

Signed-off-by: Saswata Mukherjee <saswataminsta@yahoo.com>

* Fix CI configs and scripts to work with main branch (thanos-io#3848)

Signed-off-by: Prem Saraswat <prmsrswt@gmail.com>

* block: precalculate hashes if enabled and use them during compaction (downloading) (thanos-io#3031)

* block: precalculate hashes if enabled and use them during compaction

Added the possibility to ignore certain directories in
objstore.{Download,DownloadDir}. Do not download files which have the
same hash as in remote object storage. Wire up `--hash-func` so that
writers could specify what hash function to use when uploading. There is
no performance impact if no hash function has been explicitly specified.
Clean up the removal of files logic in Thanos Compact to ensure we do
not remove something that exists on disk already.

Tested manually + new tests cover all of this more or less.

Signed-off-by: Giedrius Statkevičius <giedriuswork@gmail.com>

* block: expose GatherFileStats and use it

Signed-off-by: Giedrius Statkevičius <giedriuswork@gmail.com>

* Revert "block: expose GatherFileStats and use it"

This reverts commit 259c70b.

Signed-off-by: Giedrius Statkevičius <giedriuswork@gmail.com>

* block: do not calc hash for dirs, add locks

Signed-off-by: Giedrius Statkevičius <giedriuswork@gmail.com>

* docs/tools: update

Signed-off-by: Giedrius Statkevičius <giedriuswork@gmail.com>

* shipper: pass s.hashFunc

Signed-off-by: Giedrius Statkevičius <giedriuswork@gmail.com>

* Fix according to Bartek's comments

Signed-off-by: Giedrius Statkevičius <giedriuswork@gmail.com>

* compact: clean up comment

Signed-off-by: Giedrius Statkevičius <giedriuswork@gmail.com>

* block: close with log on error

Signed-off-by: Giedrius Statkevičius <giedriuswork@gmail.com>

* *: remove unused FNs

Signed-off-by: Giedrius Statkevičius <giedriuswork@gmail.com>

* compact: add e2e test for new hash functionality

Signed-off-by: Giedrius Statkevičius <giedriuswork@gmail.com>

* Fix according to Bartek's comments

Signed-off-by: Giedrius Statkevičius <giedriuswork@gmail.com>

* mixin: Upgrade jsonnet tooling (thanos-io#3855)

* Upgrade jsonnet tooling

Signed-off-by: Kemal Akkoyun <kakkoyun@gmail.com>

* Fix bingo version issue

Signed-off-by: Kemal Akkoyun <kakkoyun@gmail.com>

* Fix unintended removal issue

Signed-off-by: Kemal Akkoyun <kakkoyun@gmail.com>

* Update reference of master to main in docs (thanos-io#3849)

* Update reference of master to main in docs

Signed-off-by: Prem Saraswat <prmsrswt@gmail.com>

* Update image tag in tutorials/kubernetes-helm

Signed-off-by: Prem Saraswat <prmsrswt@gmail.com>

* Cut v0.19.0-rc.0 (thanos-io#3860)

Signed-off-by: Bartlomiej Plotka <bwplotka@gmail.com>

* Fixed missed changelog comments. (thanos-io#3865)

Missed from: thanos-io#3860

Signed-off-by: Bartlomiej Plotka <bwplotka@gmail.com>

* rename Metadata API to MetricMetadata API (thanos-io#3877)

Signed-off-by: yeya24 <yb532204897@gmail.com>

* Fix parseStep bug introduced in PR thanos-io#3740 (thanos-io#3887) (thanos-io#3889)

* Fix bug introduced in PR thanos-io#3740

Signed-off-by: Hitanshu Mehta <hitanshu99amehta@gmail.com>

* Minor change in test

Signed-off-by: Hitanshu Mehta <hitanshu99amehta@gmail.com>

Co-authored-by: Hitanshu Mehta <44025541+hitanshu-mehta@users.noreply.github.com>

* Tools: rewrite delete can delete series only if it matches all matchers (thanos-io#3886) (thanos-io#3890)

* rewrite delete should delete a series only if it matches all matchers in a deletion request

Signed-off-by: yeya24 <yb532204897@gmail.com>

* add test case

Signed-off-by: yeya24 <yb532204897@gmail.com>

Co-authored-by: Ben Ye <yb532204897@gmail.com>

* cmd/thanos/receive.go: Receive client infers TLS (thanos-io#3899)

Currently, the thanos Receiver infers whether it should use TLS for
the gRPC clients that forwards time series to other receivers based on
whether the remote-write HTTP server uses TLS. This is not correct, as
the HTTP server may use TLS without the gRPC server using TLS. This
commit fixes the inference.

Longer-term, this will be taken care of by the receive/router split.

Signed-off-by: Lucas Servén Marín <lserven@gmail.com>

* Cut v0.19.0-rc.1 (thanos-io#3900)

Signed-off-by: Bartlomiej Plotka <bwplotka@gmail.com>

* tools: Fix partial and empty matchers in rewrite (thanos-io#3891)

* Fix partial and empty matchers match

Signed-off-by: yeya24 <yb532204897@gmail.com>

* add testcase for non-equal matchers

Signed-off-by: yeya24 <yb532204897@gmail.com>

* v0.19.0 patch: Added receive benchmark; Fixed Receiver excessive mem usage introduced in 0.17 (thanos-io#3943)

* Added receive benchmark, baseline.

```
goos: linux
goarch: amd64
pkg: github.com/thanos-io/thanos/pkg/receive
BenchmarkHandlerReceiveHTTP
BenchmarkHandlerReceiveHTTP/typical_labels_under_1KB,_500_of_them.
BenchmarkHandlerReceiveHTTP/typical_labels_under_1KB,_500_of_them./OK
BenchmarkHandlerReceiveHTTP/typical_labels_under_1KB,_500_of_them./OK-12      	   22260	   1550152 ns/op	 1380340 B/op	    6093 allocs/op
BenchmarkHandlerReceiveHTTP/typical_labels_under_1KB,_500_of_them./conflict_errors
BenchmarkHandlerReceiveHTTP/typical_labels_under_1KB,_500_of_them./conflict_errors-12         	    6619	   6430408 ns/op	 4522487 B/op	   26118 allocs/op
BenchmarkHandlerReceiveHTTP/typical_labels_under_1KB,_5000_of_them.
BenchmarkHandlerReceiveHTTP/typical_labels_under_1KB,_5000_of_them./OK
BenchmarkHandlerReceiveHTTP/typical_labels_under_1KB,_5000_of_them./OK-12                     	    2695	  17208794 ns/op	15072963 B/op	   60441 allocs/op
BenchmarkHandlerReceiveHTTP/typical_labels_under_1KB,_5000_of_them./conflict_errors
BenchmarkHandlerReceiveHTTP/typical_labels_under_1KB,_5000_of_them./conflict_errors-12        	     474	  72533286 ns/op	46396932 B/op	  260141 allocs/op
BenchmarkHandlerReceiveHTTP/extremely_large_label_value_10MB,_10_of_them
BenchmarkHandlerReceiveHTTP/extremely_large_label_value_10MB,_10_of_them/OK
BenchmarkHandlerReceiveHTTP/extremely_large_label_value_10MB,_10_of_them/OK-12                	     270	 137050518 ns/op	226595379 B/op	     132 allocs/op
BenchmarkHandlerReceiveHTTP/extremely_large_label_value_10MB,_10_of_them/conflict_errors
BenchmarkHandlerReceiveHTTP/extremely_large_label_value_10MB,_10_of_them/conflict_errors-12   	      21	1616025443 ns/op	698724321 B/op	     408 allocs/op
PASS

Process finished with exit code 0
```


Signed-off-by: Bartlomiej Plotka <bwplotka@gmail.com>

* Copy labels.

```
GOROOT=/home/bwplotka/.gvm/gos/go1.15 #gosetup
GOPATH=/home/bwplotka/Repos/thanosgopath #gosetup
/home/bwplotka/.gvm/gos/go1.15/bin/go test -c -o /tmp/___BenchmarkHandlerReceiveHTTP_in_github_com_thanos_io_thanos_pkg_receive github.com/thanos-io/thanos/pkg/receive #gosetup
/tmp/___BenchmarkHandlerReceiveHTTP_in_github_com_thanos_io_thanos_pkg_receive -test.v -test.bench ^\QBenchmarkHandlerReceiveHTTP\E$ -test.run ^$ -test.benchmem -test.benchtime=30s
goos: linux
goarch: amd64
pkg: github.com/thanos-io/thanos/pkg/receive
BenchmarkHandlerReceiveHTTP
BenchmarkHandlerReceiveHTTP/typical_labels_under_1KB,_500_of_them
BenchmarkHandlerReceiveHTTP/typical_labels_under_1KB,_500_of_them/OK
BenchmarkHandlerReceiveHTTP/typical_labels_under_1KB,_500_of_them/OK-12      	   25887	   1537262 ns/op	 1380023 B/op	    6092 allocs/op
BenchmarkHandlerReceiveHTTP/typical_labels_under_1KB,_500_of_them/conflict_errors
BenchmarkHandlerReceiveHTTP/typical_labels_under_1KB,_500_of_them/conflict_errors-12         	    4237	   7547968 ns/op	 4522583 B/op	   26118 allocs/op
BenchmarkHandlerReceiveHTTP/typical_labels_under_1KB,_5000_of_them
BenchmarkHandlerReceiveHTTP/typical_labels_under_1KB,_5000_of_them/OK
BenchmarkHandlerReceiveHTTP/typical_labels_under_1KB,_5000_of_them/OK-12                     	    2205	  16513380 ns/op	15071092 B/op	   60420 allocs/op
BenchmarkHandlerReceiveHTTP/typical_labels_under_1KB,_5000_of_them/conflict_errors
BenchmarkHandlerReceiveHTTP/typical_labels_under_1KB,_5000_of_them/conflict_errors-12        	     525	  67278233 ns/op	46396645 B/op	  260141 allocs/op
BenchmarkHandlerReceiveHTTP/extremely_large_label_value_10MB,_10_of_them
BenchmarkHandlerReceiveHTTP/extremely_large_label_value_10MB,_10_of_them/OK
BenchmarkHandlerReceiveHTTP/extremely_large_label_value_10MB,_10_of_them/OK-12               	     285	 148049189 ns/op	226596168 B/op	     132 allocs/op
BenchmarkHandlerReceiveHTTP/extremely_large_label_value_10MB,_10_of_them/conflict_errors
BenchmarkHandlerReceiveHTTP/extremely_large_label_value_10MB,_10_of_them/conflict_errors-12  	      20	1731361499 ns/op	698722550 B/op	     401 allocs/op
PASS

Process finished with exit code 0

```

Signed-off-by: Bartlomiej Plotka <bwplotka@gmail.com>

* Addded bench.,

Signed-off-by: Bartlomiej Plotka <bwplotka@gmail.com>

* Fix.

Signed-off-by: Bartlomiej Plotka <bwplotka@gmail.com>

* Improved API.

Signed-off-by: Bartlomiej Plotka <bwplotka@gmail.com>

* Changelog.

Signed-off-by: Bartlomiej Plotka <bwplotka@gmail.com>

* Addressed Lucas comments.

Signed-off-by: Bartlomiej Plotka <bwplotka@gmail.com>

* compact: clean up directories thoroughly (thanos-io#3869)

* compact: clean up directories properly

I couldn't stop thinking about this code for some reason and I have
figured that I had missed one case in thanos-io#3031. We need to also clean up
the directories in compaction groups. A compaction could fail leaving
some new directory with a random ULID on the disk. Before attempting to
do another compaction loop, we need to remove it as well because the
compaction process always produces a new, unique directory.

Signed-off-by: Giedrius Statkevičius <giedriuswork@gmail.com>

* Remove all non expected dirs.

Signed-off-by: Bartlomiej Plotka <bwplotka@gmail.com>

* Addressed comment.

Signed-off-by: Bartlomiej Plotka <bwplotka@gmail.com>

Co-authored-by: Bartlomiej Plotka <bwplotka@gmail.com>

* Added benchmark, Moved minio-deps to fork without race fix we don't need. (thanos-io#3968)

Fixes: thanos-io#3917

Long term fix: thanos-io#3967

Signed-off-by: Bartlomiej Plotka <bwplotka@gmail.com>

* Cut v0.19.0-rc.2 (thanos-io#3969)

Signed-off-by: Bartlomiej Plotka <bwplotka@gmail.com>

* pkg/rules: fix deduplication of equal alerts with different labels (thanos-io#3960) (thanos-io#3999)

Currently, if an alerting rule having the same name with different
severity labels is being returned from different replicas then they
are being treated as separate alerts.

Given the following alerts a1,a2 with severities s1,s2 returned from
replicas r1,2:

a1[s1,r1]
a1[s2,r1]
a1[s1,r2]
a1[s2,r2]

Then, currently, the algorithm deduplicates to:

a1[s1]
a1[s2]
a1[s1]
a1[s2]

Instead of the intendet result:

a1[s1]
a1[s2]

This fixes it by removing replica labels before sorting labels for
deduplication.

Signed-off-by: Sergiusz Urbaniak <sergiusz.urbaniak@gmail.com>
# Conflicts:
#	CHANGELOG.md

Co-authored-by: Sergiusz Urbaniak <sergiusz.urbaniak@gmail.com>

* Cut v0.19.0 (thanos-io#3998)

Signed-off-by: Bartlomiej Plotka <bwplotka@gmail.com>

* Fixed VERSION file.

Signed-off-by: Bartlomiej Plotka <bwplotka@gmail.com>

Co-authored-by: Lucas Servén Marín <lserven@gmail.com>
Co-authored-by: Marco Pracucci <marco@pracucci.com>
Co-authored-by: Naman Lakhwani <namanlakhwani@gmail.com>
Co-authored-by: Bradley <bwilsonhunt@gmail.com>
Co-authored-by: Giedrius Statkevičius <giedriuswork@gmail.com>
Co-authored-by: dmaiocchi <dmaiocchi@suse.com>
Co-authored-by: Bartlomiej Plotka <bwplotka@gmail.com>
Co-authored-by: Ben Ye <yb532204897@gmail.com>
Co-authored-by: Holger Freyther <holger@freyther.de>
Co-authored-by: Biswajit Ghosh <34703680+Biswajitghosh98@users.noreply.github.com>
Co-authored-by: Matt W <mattjwhitney@gmail.com>
Co-authored-by: Mert Açıkportalı <mertacikportali@gmail.com>
Co-authored-by: Lili Cosic <cosiclili@gmail.com>
Co-authored-by: Johannes Frey <johannes.frey@daimler.com>
Co-authored-by: Vladimir Kononov <krya-kryak@users.noreply.github.com>
Co-authored-by: Ben Kochie <superq@gmail.com>
Co-authored-by: Matthias Loibl <mail@matthiasloibl.com>
Co-authored-by: Sonia Singla <soniasingla.1812@gmail.com>
Co-authored-by: Kemal Akkoyun <kakkoyun@users.noreply.github.com>
Co-authored-by: Junyoung, Sung <junyoung.sung@navercorp.com>
Co-authored-by: Abhishek Singh Chauhan <abhisheksinghchauhan357@gmail.com>
Co-authored-by: Sudhar287 <sudhar287@gmail.com>
Co-authored-by: Max Chandler <59826076+Max-Chandler@users.noreply.github.com>
Co-authored-by: Matt Lawrence <m.law@apple.com>
Co-authored-by: Mauro Stettler <mauro.stettler@gmail.com>
Co-authored-by: Hitanshu Mehta <44025541+hitanshu-mehta@users.noreply.github.com>
Co-authored-by: Sergiusz Urbaniak <sergiusz.urbaniak@gmail.com>
Co-authored-by: Hitanshu Mehta <hitanshu99amehta@gmail.com>
Co-authored-by: Matt Lawrence <79317313+m-lawre@users.noreply.github.com>
Co-authored-by: Max Chandler <max_chandler@apple.com>
Co-authored-by: Simon Pasquier <spasquie@redhat.com>
Co-authored-by: Stephane Brillant <stephane.brillant@logmein.com>
Co-authored-by: Saswata Mukherjee <saswataminsta@yahoo.com>
Co-authored-by: Prem Saraswat <prmsrswt@gmail.com>
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