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Add API call for pairwise distance computation #52

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ayan-b opened this issue Jul 22, 2020 · 0 comments · Fixed by #54
Closed

Add API call for pairwise distance computation #52

ayan-b opened this issue Jul 22, 2020 · 0 comments · Fixed by #54
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@ayan-b
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enhancement
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GSOC2020

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@ayan-b
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ayan-b commented Jul 22, 2020 •
edited

Related to #51.

A new API for this:

Let's say that I have 180 points. On the first iteration I take the first one and compute the distance to the other 179, on the following iteration i take the second one and compute the distance to the next 178, and so on.

In particular, for n points we would consider the 1st one as source and rest of the (n - 1) ones as target and, then 2nd one as source and (n - 2) as target and so on...
@ayan-b ayan-b self-assigned this Jul 24, 2020
@ayan-b ayan-b added this to the GSOC2020 milestone Jul 24, 2020
ayan-b added a commit to ayan-b/tvb-geodesic that referenced this issue Jul 24, 2020
@ayan-b
gdist.pyx: New API distance_matrix_of_selected_points
9aa7c4d 
Closes the-virtual-brain#52
@ayan-b ayan-b mentioned this issue Jul 24, 2020
Merged
ayan-b added a commit to ayan-b/tvb-geodesic that referenced this issue Jul 25, 2020
@ayan-b
gdist.pyx: New API distance_matrix_of_selected_points
36b80ae 
Closes the-virtual-brain#52
ayan-b added a commit to ayan-b/tvb-geodesic that referenced this issue Jul 25, 2020
@ayan-b
test_gdist.py: Add more assertions
248a55d 
Check if distances is of type sparse matrix. Also
add API doc in README.rst and add docstring to
distance_matrix_of_selected_points

Related to the-virtual-brain#52
ayan-b added a commit to ayan-b/tvb-geodesic that referenced this issue Jul 25, 2020
@ayan-b
test_gdist.py: Add more assertions
30e7fac 
Check if distances is of type sparse matrix. Also
add API doc in README.rst and add docstring to
distance_matrix_of_selected_points

Related to the-virtual-brain#52
@liadomide liadomide changed the title Add API for new use case Add API call for pairwise distance computation Jul 25, 2020
ayan-b added a commit to ayan-b/tvb-geodesic that referenced this issue Jul 25, 2020
@ayan-b
gdist.pyx: New API distance_matrix_of_selected_points
314e014 
Closes the-virtual-brain#52
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TVB-2719 gdist.pyx: New API distance_matrix_of_selected_points ayan-b/tvb-geodesic
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