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Qc metrics update #615

Merged
merged 11 commits into from May 7, 2019
Merged

Qc metrics update #615

merged 11 commits into from May 7, 2019

Commits on Apr 30, 2019

  1. calculate_qc_metrics can use layers and raw now

    @ivirshup
    ivirshup committed Apr 30, 2019
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  2. Update calculate_qc_metrics docs

    @ivirshup
    ivirshup committed Apr 30, 2019
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  3. Added describe_obs and describe_var 

    I'll be using these internally for `calculate_qc_metrics` next, but am leaving that undone for now for testing purposes.
    @ivirshup
    ivirshup committed Apr 30, 2019
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  4. Make cell proportions not parallel for small data 

    This eliminates the long compilation time for jit warmup in cases where it probably wasn't neccesary.

One advantage of this is the tests will run much faster after the first run.
    @ivirshup
    ivirshup committed Apr 30, 2019
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  5. Use describe_{obs,var} in calculate_qc_metrics

    @ivirshup
    ivirshup committed Apr 30, 2019
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  6. Update qc metrics docs

    @ivirshup
    ivirshup committed Apr 30, 2019
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  7. Formatting pass

    @ivirshup
    ivirshup committed Apr 30, 2019
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  8. Cut added functions, add flag for parallelism

    @ivirshup
    ivirshup committed Apr 30, 2019
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  9. scverse#615 release note

    @ivirshup
    ivirshup committed Apr 30, 2019
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Commits on May 1, 2019

  1. Merge branch 'master' into qc_metrics_update

    @ivirshup
    ivirshup committed May 1, 2019
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Commits on May 7, 2019

  1. Merge branch 'master' into qc_metrics_update

    @ivirshup
    ivirshup committed May 7, 2019
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