install from github not working in OS X

[donlelek]

Hi,
I tried to install from github, this is what I got:

> devtools::install_github("hadley/haven")
Downloading github repo hadley/haven@master
Installing haven
'/Library/Frameworks/R.framework/Resources/bin/R' --vanilla CMD INSTALL  \
  '/private/var/folders/r_/fm5p9qsx519fxh8cvr2vbtt80000gp/T/Rtmp3Bpad8/devtools9be559edde1/hadley-haven-432ad52'  \
  --library='/Users/dprice/Library/R/3.1/library' --install-tests 

* installing *source* package ‘haven’ ...
** libs
clang -I/Library/Frameworks/R.framework/Resources/include     -I/usr/local/include -I/usr/local/include/freetype2 -I/opt/X11/include -I"/Users/dprice/Library/R/3.1/library/Rcpp/include" -I"/Users/dprice/Library/R/3.1/library/BH/include"   -fPIC  -Wall -mtune=core2 -g -O2  -c CKHashTable.c -o CKHashTable.o
clang++ -arch x86_64 -ftemplate-depth-256 -I/Library/Frameworks/R.framework/Resources/include     -I/usr/local/include -I/usr/local/include/freetype2 -I/opt/X11/include -I"/Users/dprice/Library/R/3.1/library/Rcpp/include" -I"/Users/dprice/Library/R/3.1/library/BH/include"   -fPIC  -Wall -mtune=core2 -O3    -c DfReader.cpp -o DfReader.o
In file included from DfReader.cpp:1:
In file included from /Users/dprice/Library/R/3.1/library/Rcpp/include/Rcpp.h:27:
In file included from /Users/dprice/Library/R/3.1/library/Rcpp/include/RcppCommon.h:29:
In file included from /Users/dprice/Library/R/3.1/library/Rcpp/include/Rcpp/platform/compiler.h:171:
In file included from /Library/Developer/CommandLineTools/usr/bin/../include/c++/v1/map:423:
In file included from /Library/Developer/CommandLineTools/usr/bin/../include/c++/v1/__tree:15:
/Library/Developer/CommandLineTools/usr/bin/../include/c++/v1/iterator:341:10: fatal error: '__debug' file not found
#include <__debug>
         ^
1 error generated.
make: *** [DfReader.o] Error 1
ERROR: compilation failed for package ‘haven’
* removing ‘/Users/dprice/Library/R/3.1/library/haven’
* restoring previous ‘/Users/dprice/Library/R/3.1/library/haven’
Error: Command failed (1)
> Sys.info()
                                                                                           sysname 
                                                                                          "Darwin" 
                                                                                           release 
                                                                                          "14.3.0" 
                                                                                           version 
"Darwin Kernel Version 14.3.0: Mon Mar 23 11:59:05 PDT 2015; root:xnu-2782.20.48~5/RELEASE_X86_64" 
                                                                                          nodename 
                                                                           "UPEI-MacBookAir.local" 
                                                                                           machine 
                                                                                          "x86_64" 
                                                                                             login 
                                                                                          "dprice" 
                                                                                              user 
                                                                                          "dprice" 
                                                                                    effective_user 
                                                                                          "dprice" 
> sessionInfo()
R version 3.1.3 (2015-03-09)
Platform: x86_64-apple-darwin13.4.0 (64-bit)
Running under: OS X 10.10.3 (Yosemite)

locale:
[1] en_CA.UTF-8/en_CA.UTF-8/en_CA.UTF-8/C/en_CA.UTF-8/en_CA.UTF-8

attached base packages:
[1] stats     graphics  grDevices utils     datasets  methods   base     

loaded via a namespace (and not attached):
[1] bitops_1.0-6   devtools_1.7.0 evaluate_0.5.5 formatR_1.1    httr_0.6.1     knitr_1.9      RCurl_1.95-4.5 stringr_0.6.2  tools_3.1.3

Installing via install.packages worked though.

[donlelek]

I think it's an OS X problem, check this:
http://stackoverflow.com/questions/29529455/missing-c-header-debug-after-updating-osx-command-line-tools-6-3

[tklebel]

This is actually an issue with devtools on OS X. I opened an issue over there.

[donlelek]

I will close this since it's not specific to this package.