Switch to gh actions (#20)

* Add github workflow * Enable pkgdown * Remove travis * Update README page badge + vignette links. * Bump requirement to R 3.5.0 * Only run actions on R >= 3.5
tmsalab · Mar 18, 2020 · acf01df · acf01df
1 parent 7a0a947
commit acf01df
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diff --git a/.Rbuildignore b/.Rbuildignore
@@ -11,3 +11,5 @@
 ^_pkgdown\.yml$
 ^docs$
 ^pkgdown$
+^\.github/workflows/R-CMD-check\.yaml$
+^\.github/workflows/pkgdown\.yaml$
diff --git a/.github/workflows/R-CMD-check.yaml b/.github/workflows/R-CMD-check.yaml
@@ -0,0 +1,78 @@
+on:
+  push:
+    branches:
+      - master
+  pull_request:
+    branches:
+      - master
+
+name: R-CMD-check
+
+jobs:
+  R-CMD-check:
+    runs-on: ${{ matrix.config.os }}
+
+    name: ${{ matrix.config.os }} (${{ matrix.config.r }})
+
+    strategy:
+      fail-fast: false
+      matrix:
+        config:
+          - {os: windows-latest, r: 'release'}
+          - {os: macOS-latest, r: 'release'}
+          - {os: macOS-latest, r: 'devel'}
+          - {os: ubuntu-16.04, r: '3.5', rspm: "https://demo.rstudiopm.com/all/__linux__/xenial/latest"}
+          - {os: ubuntu-16.04, r: 'release', rspm: "https://demo.rstudiopm.com/all/__linux__/xenial/latest"}
+
+    env:
+      R_REMOTES_NO_ERRORS_FROM_WARNINGS: true
+      RSPM: ${{ matrix.config.rspm }}
+
+    steps:
+      - uses: actions/checkout@v2
+
+      - uses: r-lib/actions/setup-r@master
+        with:
+          r-version: ${{ matrix.config.r }}
+
+      - uses: r-lib/actions/setup-pandoc@master
+
+      - name: Query dependencies
+        run: |
+          install.packages('remotes')
+          saveRDS(remotes::dev_package_deps(dependencies = TRUE), "depends.Rds", version = 2)
+        shell: Rscript {0}
+
+      - name: Cache R packages
+        if: runner.os != 'Windows'
+        uses: actions/cache@v1
+        with:
+          path: ${{ env.R_LIBS_USER }}
+          key: ${{ runner.os }}-r-${{ matrix.config.r }}-${{ hashFiles('depends.Rds') }}
+          restore-keys: ${{ runner.os }}-r-${{ matrix.config.r }}-
+
+      - name: Install system dependencies
+        if: runner.os == 'Linux'
+        env:
+          RHUB_PLATFORM: linux-x86_64-ubuntu-gcc
+        run: |
+          Rscript -e "remotes::install_github('r-hub/sysreqs')"
+          sysreqs=$(Rscript -e "cat(sysreqs::sysreq_commands('DESCRIPTION'))")
+          sudo -s eval "$sysreqs"
+
+      - name: Install dependencies
+        run: |
+          remotes::install_deps(dependencies = TRUE)
+          remotes::install_cran("rcmdcheck")
+        shell: Rscript {0}
+
+      - name: Check
+        run: rcmdcheck::rcmdcheck(args = "--no-manual", error_on = "warning", check_dir = "check")
+        shell: Rscript {0}
+
+      - name: Upload check results
+        if: failure()
+        uses: actions/upload-artifact@master
+        with:
+          name: ${{ runner.os }}-r${{ matrix.config.r }}-results
+          path: check
diff --git a/.github/workflows/pkgdown.yaml b/.github/workflows/pkgdown.yaml
@@ -0,0 +1,42 @@
+on:
+  push:
+    branches: master
+
+name: pkgdown
+
+jobs:
+  pkgdown:
+    runs-on: macOS-latest
+    steps:
+      - uses: actions/checkout@v2
+
+      - uses: r-lib/actions/setup-r@master
+
+      - uses: r-lib/actions/setup-pandoc@master
+
+      - name: Query dependencies
+        run: |
+          install.packages('remotes')
+          saveRDS(remotes::dev_package_deps(dependencies = TRUE), "depends.Rds", version = 2)
+        shell: Rscript {0}
+
+      - name: Cache R packages
+        uses: actions/cache@v1
+        with:
+          path: ${{ env.R_LIBS_USER }}
+          key: macOS-r-3.6-${{ hashFiles('depends.Rds') }}
+          restore-keys: macOS-r-3.6-
+
+      - name: Install dependencies
+        run: |
+          install.packages("remotes")
+          remotes::install_deps(dependencies = TRUE)
+          remotes::install_dev("pkgdown")
+        shell: Rscript {0}
+
+      - name: Install package
+        run: R CMD INSTALL .
+
+      - name: Deploy package
+        run: pkgdown::deploy_to_branch(new_process = FALSE)
+        shell: Rscript {0}
diff --git a/.travis.yml b/.travis.yml
diff --git a/DESCRIPTION b/DESCRIPTION
@@ -28,7 +28,7 @@ URL: https://tmsalab.github.io/simcdm, https://github.com/tmsalab/simcdm
 BugReports: https://github.com/tmsalab/simcdm/issues
 License: GPL (>= 2)
 Depends:
-    R (>= 3.4.0)
+    R (>= 3.5.0)
 Imports: Rcpp  (>= 1.0.0)
 LinkingTo: Rcpp,
     RcppArmadillo (>= 0.9.200)

diff --git a/README.Rmd b/README.Rmd
@@ -15,7 +15,7 @@ knitr::opts_chunk$set(
 # simcdm 
 
 <!-- badges: start -->
-[![Build Status](https://travis-ci.com/tmsalab/simcdm.svg)](https://travis-ci.com/tmsalab/simcdm)
+[![R build status](https://github.com/tmsalab/simcdm/workflows/R-CMD-check/badge.svg)](https://github.com/tmsalab/simcdm/actions)
 [![Package-License](http://img.shields.io/badge/license-GPL%20(%3E=2)-brightgreen.svg?style=flat)](http://www.gnu.org/licenses/gpl-2.0.html)
 [![CRAN Version Badge](http://www.r-pkg.org/badges/version/simcdm)](https://cran.r-project.org/package=simcdm)
 [![CRAN Status](https://cranchecks.info/badges/worst/simcdm)](https://cran.r-project.org/web/checks/check_results_simcdm.html)
@@ -60,15 +60,15 @@ a later time, the `attribute_*()` will likely be moved to a different package.
 
 For more details, please see the [package vignettes](vignettes/):
 
-- [Overview of `simcdm`](vignettes/overview-simcdm.html)
-- [Using `simcdm` in R packages](vignettes/simcdm-in-packages.html)
+- [Overview of `simcdm`](https://tmsalab.github.io/simcdm/articles/overview-simcdm.html)
+- [Using `simcdm` in R packages](https://tmsalab.github.io/simcdm/articles/simcdm-in-packages.html)
 
 ## Authors
 
 James Joseph Balamuta and Steven Andrew Culpepper
 with contributions from Aaron Hudson.
 
-## Citing the `simcdm` package
+## Citing the simcdm package
 
 To ensure future development of the package, please cite `simcdm` package if 
 used during the analysis or simulations. Citation information for the package

diff --git a/README.md b/README.md
@@ -5,8 +5,8 @@
 
 <!-- badges: start -->
 
-[![Build
-Status](https://travis-ci.com/tmsalab/simcdm.svg)](https://travis-ci.com/tmsalab/simcdm)
+[![R build
+status](https://github.com/tmsalab/simcdm/workflows/R-CMD-check/badge.svg)](https://github.com/tmsalab/simcdm/actions)
 [![Package-License](http://img.shields.io/badge/license-GPL%20\(%3E=2\)-brightgreen.svg?style=flat)](http://www.gnu.org/licenses/gpl-2.0.html)
 [![CRAN Version
 Badge](http://www.r-pkg.org/badges/version/simcdm)](https://cran.r-project.org/package=simcdm)
@@ -59,15 +59,17 @@ likely be moved to a different package.
 
 For more details, please see the [package vignettes](vignettes/):
 
-  - [Overview of `simcdm`](vignettes/overview-simcdm.html)
-  - [Using `simcdm` in R packages](vignettes/simcdm-in-packages.html)
+  - [Overview of
+    `simcdm`](https://tmsalab.github.io/simcdm/articles/overview-simcdm.html)
+  - [Using `simcdm` in R
+    packages](https://tmsalab.github.io/simcdm/articles/simcdm-in-packages.html)
 
 ## Authors
 
 James Joseph Balamuta and Steven Andrew Culpepper with contributions
 from Aaron Hudson.
 
-## Citing the `simcdm` package
+## Citing the simcdm package
 
 To ensure future development of the package, please cite `simcdm`
 package if used during the analysis or simulations. Citation information