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Ordinal motifs #151

Merged
merged 23 commits into from
Jun 14, 2024
Merged

Ordinal motifs #151

merged 23 commits into from
Jun 14, 2024

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hirthjo
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@hirthjo hirthjo commented Jun 13, 2024

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@tomhanika tomhanika merged commit 97d3d7a into dev Jun 14, 2024
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tomhanika added a commit that referenced this pull request Jul 15, 2024
* repaired test when pcbo is present: clojure is not mutable (#148)

* repaired test when pcbo is present: clojure is not mutable

* Classic 'Vorzeichenfehler'

* New fca style (#149)

* new latex fca style output format

* removed whitespaces

* Added doc string

* Adapted requirements: now boring code but no warning

* Ordinal motifs (#151)

* Ordinal Motifs

* reduce computational time for candidates-by-subset-heredity and identify-full-scale-measures :interordinal

* add tests for ordinal-motifs

* add is-of-scale? method to check if context is of specific scale-type

* add documentation for ordinal motifs

* test cycles-of-g

* test scale-complex function

* more tests for ordinal-motifs

* add tests for get-complex

* fix error in restrict-extents-to-base-set

* Revert "fix error in restrict-extents-to-base-set"

This reverts commit e11f5d0.

* fix error in ordinal scale measures

* stop compute-ordinal-motifs+stats at empty set to avoid error

* add test for greedy-motif-covering

* comment

* Updated Authors

* more boring imports

---------

Co-authored-by: Johannes Hirth <jhi@cs.uni-kassel.de>
Co-authored-by: Jana <jana.fischer@student.uni-kassel.de>

---------

Co-authored-by: Johannes Hirth <58222089+hirthjo@users.noreply.github.com>
Co-authored-by: Johannes Hirth <jhi@cs.uni-kassel.de>
Co-authored-by: Jana <jana.fischer@student.uni-kassel.de>
tomhanika added a commit that referenced this pull request Aug 13, 2024
* repaired test when pcbo is present: clojure is not mutable (#148)

* repaired test when pcbo is present: clojure is not mutable

* Classic 'Vorzeichenfehler'

* New fca style (#149)

* new latex fca style output format

* removed whitespaces

* Added doc string

* Adapted requirements: now boring code but no warning

* Ordinal motifs (#151)

* Ordinal Motifs

* reduce computational time for candidates-by-subset-heredity and identify-full-scale-measures :interordinal

* add tests for ordinal-motifs

* add is-of-scale? method to check if context is of specific scale-type

* add documentation for ordinal motifs

* test cycles-of-g

* test scale-complex function

* more tests for ordinal-motifs

* add tests for get-complex

* fix error in restrict-extents-to-base-set

* Revert "fix error in restrict-extents-to-base-set"

This reverts commit e11f5d0.

* fix error in ordinal scale measures

* stop compute-ordinal-motifs+stats at empty set to avoid error

* add test for greedy-motif-covering

* comment

* Updated Authors

* more boring imports

---------

Co-authored-by: Johannes Hirth <jhi@cs.uni-kassel.de>
Co-authored-by: Jana <jana.fischer@student.uni-kassel.de>

* Adapted version number

* Update README.md

Updated year

* Simplicial complexes (#153)

* Ordinal Motifs

* reduce computational time for candidates-by-subset-heredity and identify-full-scale-measures :interordinal

* add tests for ordinal-motifs

* add is-of-scale? method to check if context is of specific scale-type

* add documentation for ordinal motifs

* test cycles-of-g

* test scale-complex function

* more tests for ordinal-motifs

* add tests for get-complex

* fix error in restrict-extents-to-base-set

* Revert "fix error in restrict-extents-to-base-set"

This reverts commit e11f5d0.

* fix error in ordinal scale measures

* stop compute-ordinal-motifs+stats at empty set to avoid error

* start adding structure for simplicial complexes

* add test for greedy-motif-covering

* comment

* add and test FullSimplicialComplex

* add constructor without check and more tests

* add constructors

* add function to create t-simplex from context and lattice

* add another test example and fix some errors

* experiments with next_closure for t-simplex

* test t-simplex computation with next closure algorithm

* generalize next-closure function (add ordinal motif case with :ordinal scale)

* refactoring

* more code cleanup

* fix error in next closure for ordinal motifs

* refactoring: move closed set functions from base to separate file

* replace fca/next-closure with already existing methods

* for :ordinal ordinal motifs with next closure, use same condition as in ordinal-motifs branch

* add :interordinal, :nominal and :contranominal ordinal motifs with next closure

* add more complex tests for ordinal motifs with next closure

* simplify tests

* refactoring and code cleanup

* add :crown ordinal motifs with next closure

* fix failing tests

* remove :crown from simplicial complexes (because it is not a simplicial complex)

* Fixed imports

---------

Co-authored-by: Johannes Hirth <jhi@cs.uni-kassel.de>
Co-authored-by: Jana <jana.fischer@student.uni-kassel.de>

* Update Getting-Started.org

* Update Getting-Started.org

* Added complex-dimension

* Added some analytics for simplicial complexes

* Update deps-lock.json (#155)

Co-authored-by: tomhanika <tomhanika@users.noreply.github.com>

---------

Co-authored-by: Johannes Hirth <58222089+hirthjo@users.noreply.github.com>
Co-authored-by: Johannes Hirth <jhi@cs.uni-kassel.de>
Co-authored-by: Jana <jana.fischer@student.uni-kassel.de>
Co-authored-by: github-actions[bot] <41898282+github-actions[bot]@users.noreply.github.com>
Co-authored-by: tomhanika <tomhanika@users.noreply.github.com>
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3 participants