Preview release for module A
Pre-release
Pre-release
gijskant
released this
16 Dec 17:48
·
1394 commits
to master
since this release
Preview release including the functionality of modules B and A and most of module C.
Added features since previous release:
- Fetching ontology codes from an external ontology server
- Generating a ontology mapping file for the variables used in a study
- Applying the ontology mapping in transmart-batch when loading data
- Shared concepts (not bound to a study) supported in the v2 tree
- Shared concepts supported in the v2 query language
- REST API for storage and supported workflows (module C)
- Bug fixes for module B
Known issues
- The
capsule
feature oftransmart-batch
is currently not working. The tool needs to be started with
gradle run -Pargs='-p studies/TEST_17_1'
- Some tests in
transmart-batch
related to the cross-study nodes and some tests related to high dimensional data are failing. We are still investigating and fixing them. - Some tests in
transmart-e2e
are failing. We are still investigating and fixing them.