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Fix #32
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@peterdesmet
peterdesmet committed Apr 30, 2020
1 parent 92ccb3c commit 43997b6
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Showing 15 changed files with 667 additions and 635 deletions.
7 changes: 2 additions & 5 deletions data/interim/taxa_unified.csv
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Original file line number Diff line number Diff line change
Expand Up @@ -357,10 +357,8 @@ verificationKey,scientificName,nameKey,taxonID,kingdom,phylum,class,order,family
2498010,"Tadorna cana (Gmelin, 1789)",10983835,gbif:2498010,Animalia,Chordata,Aves,Anseriformes,Anatidae,Tadorna,Tadorna cana,d7dddbf4-2cf0-4f39-9b2a-bb099caae36c,7485221,Tadorna,Tadorna cana," (Gmelin, 1789)",SCIENTIFIC,SPECIES,ACCEPTED,,,e1c3be64-2799-4342-8312-49d076993132,159498572
2498011,"Tadorna variegata (Gmelin, 1789)",10983929,gbif:2498011,Animalia,Chordata,Aves,Anseriformes,Anatidae,Tadorna,Tadorna variegata,d7dddbf4-2cf0-4f39-9b2a-bb099caae36c,7485221,Tadorna,Tadorna variegata," (Gmelin, 1789)",SCIENTIFIC,SPECIES,ACCEPTED,,,e1c3be64-2799-4342-8312-49d076993132,159498571
2498015,"Tadorna ferruginea (Pallas, 1764)",10983863,gbif:2498015,Animalia,Chordata,Aves,Anseriformes,Anatidae,Tadorna,Tadorna ferruginea,d7dddbf4-2cf0-4f39-9b2a-bb099caae36c,7485221,Tadorna,Tadorna ferruginea," (Pallas, 1764)",SCIENTIFIC,SPECIES,ACCEPTED,,,e1c3be64-2799-4342-8312-49d076993132|1738f272-6b5d-4f43-9a92-453a8c5ea50a,159498574|146042244
2498027,"Anser fabalis (Latham, 1787)",726014,gbif:2498027,Animalia,Chordata,Aves,Anseriformes,Anatidae,Anser,Anser fabalis,d7dddbf4-2cf0-4f39-9b2a-bb099caae36c,2498016,Anser,Anser fabalis," (Latham, 1787)",SCIENTIFIC,SPECIES,ACCEPTED,,,1738f272-6b5d-4f43-9a92-453a8c5ea50a,146042291
2498034,"Anser cygnoides (Linnaeus, 1758)",725939,gbif:2498034,Animalia,Chordata,Aves,Anseriformes,Anatidae,Anser,Anser cygnoides,d7dddbf4-2cf0-4f39-9b2a-bb099caae36c,2498016,Anser,Anser cygnoides," (Linnaeus, 1758)",SCIENTIFIC,SPECIES,ACCEPTED,,,e1c3be64-2799-4342-8312-49d076993132,159498555
2498035,"Anser indicus (Latham, 1790)",726126,gbif:2498035,Animalia,Chordata,Aves,Anseriformes,Anatidae,Anser,Anser indicus,d7dddbf4-2cf0-4f39-9b2a-bb099caae36c,2498016,Anser,Anser indicus," (Latham, 1790)",SCIENTIFIC,SPECIES,ACCEPTED,,,e1c3be64-2799-4342-8312-49d076993132|1738f272-6b5d-4f43-9a92-453a8c5ea50a,159498554|146042194
2498036,"Anser anser (Linnaeus, 1758)",725735,gbif:2498036,Animalia,Chordata,Aves,Anseriformes,Anatidae,Anser,Anser anser,d7dddbf4-2cf0-4f39-9b2a-bb099caae36c,2498016,Anser,Anser anser," (Linnaeus, 1758)",SCIENTIFIC,SPECIES,ACCEPTED,,,1738f272-6b5d-4f43-9a92-453a8c5ea50a,146042240
2498046,"Chenonetta jubata (Latham, 1802)",2350392,gbif:2498046,Animalia,Chordata,Aves,Anseriformes,Anatidae,Chenonetta,Chenonetta jubata,d7dddbf4-2cf0-4f39-9b2a-bb099caae36c,2498045,Chenonetta,Chenonetta jubata," (Latham, 1802)",SCIENTIFIC,SPECIES,ACCEPTED,,,e1c3be64-2799-4342-8312-49d076993132,159498557
2498054,"Pteronetta hartlaubii (Cassin, 1860)",9490540,gbif:2498054,Animalia,Chordata,Aves,Anseriformes,Anatidae,Pteronetta,Pteronetta hartlaubii,d7dddbf4-2cf0-4f39-9b2a-bb099caae36c,2498053,Pteronetta,Pteronetta hartlaubii," (Cassin, 1860)",SCIENTIFIC,SPECIES,ACCEPTED,,,e1c3be64-2799-4342-8312-49d076993132,159498614
2498064,"Anas erythrorhyncha Gmelin, 1789",622041,gbif:2498064,Animalia,Chordata,Aves,Anseriformes,Anatidae,Anas,Anas erythrorhyncha,d7dddbf4-2cf0-4f39-9b2a-bb099caae36c,2498056,Anas,Anas erythrorhyncha,"Gmelin, 1789",SCIENTIFIC,SPECIES,ACCEPTED,,,e1c3be64-2799-4342-8312-49d076993132,159498599
Expand Down Expand Up @@ -1868,7 +1866,6 @@ verificationKey,scientificName,nameKey,taxonID,kingdom,phylum,class,order,family
5232437,"Branta canadensis (Linnaeus, 1758)",1634940,gbif:5232437,Animalia,Chordata,Aves,Anseriformes,Anatidae,Branta,Branta canadensis,d7dddbf4-2cf0-4f39-9b2a-bb099caae36c,2498190,Branta,Branta canadensis," (Linnaeus, 1758)",SCIENTIFIC,SPECIES,ACCEPTED,,,e1c3be64-2799-4342-8312-49d076993132|1738f272-6b5d-4f43-9a92-453a8c5ea50a,159498565|146042293
5232445,"Branta sandvicensis (Vigors, 1834)",1634941,gbif:5232445,Animalia,Chordata,Aves,Anseriformes,Anatidae,Branta,Branta sandvicensis,d7dddbf4-2cf0-4f39-9b2a-bb099caae36c,2498190,Branta,Branta sandvicensis," (Vigors, 1834)",SCIENTIFIC,SPECIES,ACCEPTED,,,e1c3be64-2799-4342-8312-49d076993132,159498566
5232452,"Branta hutchinsii (Richardson, 1832)",1635082,gbif:5232452,Animalia,Chordata,Aves,Anseriformes,Anatidae,Branta,Branta hutchinsii,d7dddbf4-2cf0-4f39-9b2a-bb099caae36c,2498190,Branta,Branta hutchinsii," (Richardson, 1832)",SCIENTIFIC,SPECIES,ACCEPTED,,,e1c3be64-2799-4342-8312-49d076993132,159498567
5232464,"Branta leucopsis (Bechstein, 1803)",1634894,gbif:5232464,Animalia,Chordata,Aves,Anseriformes,Anatidae,Branta,Branta leucopsis,d7dddbf4-2cf0-4f39-9b2a-bb099caae36c,2498190,Branta,Branta leucopsis," (Bechstein, 1803)",SCIENTIFIC,SPECIES,ACCEPTED,,,1738f272-6b5d-4f43-9a92-453a8c5ea50a,146042267
5232465,"Plectropterus gambensis (Linnaeus, 1766)",8896094,gbif:5232465,Animalia,Chordata,Aves,Anseriformes,Anatidae,Plectropterus,Plectropterus gambensis,d7dddbf4-2cf0-4f39-9b2a-bb099caae36c,2498289,Plectropterus,Plectropterus gambensis," (Linnaeus, 1766)",SCIENTIFIC,SPECIES,ACCEPTED,,,e1c3be64-2799-4342-8312-49d076993132,159498559
5232469,"Oxyura vittata (Philippi, 1860)",8016139,gbif:5232469,Animalia,Chordata,Aves,Anseriformes,Anatidae,Oxyura,Oxyura vittata,d7dddbf4-2cf0-4f39-9b2a-bb099caae36c,2498299,Oxyura,Oxyura vittata," (Philippi, 1860)",SCIENTIFIC,SPECIES,ACCEPTED,,,e1c3be64-2799-4342-8312-49d076993132,159498549
5250069,"Thecaphora oxalidis (Ellis & Tracy) M.Lutz, R.Bauer & Piatek",17244014,gbif:5250069,Fungi,Basidiomycota,Ustilaginomycetes,Urocystidales,Glomosporiaceae,Thecaphora,Thecaphora oxalidis,d7dddbf4-2cf0-4f39-9b2a-bb099caae36c,2513549,Thecaphora,Thecaphora oxalidis,"M.Lutz, R.Bauer & Piatek (Ellis & Tracy)",SCIENTIFIC,SPECIES,ACCEPTED,,,1f3505cd-5d98-4e23-bd3b-ffe59d05d7c2,148437775
Expand Down Expand Up @@ -2452,7 +2449,7 @@ verificationKey,scientificName,nameKey,taxonID,kingdom,phylum,class,order,family
6308164,Scandix australis subsp. grandiflora (L.) Thell.,10108622,gbif:6308164,Plantae,Tracheophyta,Magnoliopsida,Apiales,Apiaceae,Scandix,Scandix australis,d7dddbf4-2cf0-4f39-9b2a-bb099caae36c,6027018,Scandix australis,Scandix australis grandiflora,Thell. (L.),SCIENTIFIC,SUBSPECIES,ACCEPTED,,,9ff7d317-609b-4c08-bd86-3bc404b77c42,141266082
6363496,Dianthus superbus L.,3449161,gbif:6363496,Plantae,Tracheophyta,Magnoliopsida,Caryophyllales,Caryophyllaceae,Dianthus,Dianthus superbus,d7dddbf4-2cf0-4f39-9b2a-bb099caae36c,3085411,Dianthus,Dianthus superbus,L.,SCIENTIFIC,SPECIES,ACCEPTED,,,9ff7d317-609b-4c08-bd86-3bc404b77c42,141267209
6366597,Gentiana acaulis L.,4638438,gbif:6366597,Plantae,Tracheophyta,Magnoliopsida,Gentianales,Gentianaceae,Gentiana,Gentiana acaulis,d7dddbf4-2cf0-4f39-9b2a-bb099caae36c,3170037,Gentiana,Gentiana acaulis,L.,SCIENTIFIC,SPECIES,ACCEPTED,,,9ff7d317-609b-4c08-bd86-3bc404b77c42,141264742
6369140,Prunus domestica subsp. domestica,9278132,gbif:6369140,Plantae,Tracheophyta,Magnoliopsida,Rosales,Rosaceae,Prunus,Prunus domestica,d7dddbf4-2cf0-4f39-9b2a-bb099caae36c,7931731,Prunus domestica,Prunus domestica domestica,"",SCIENTIFIC,SUBSPECIES,ACCEPTED,,,9ff7d317-609b-4c08-bd86-3bc404b77c42,141265405
6369140,Prunus domestica subsp. domestica,9278132,gbif:6369140,Plantae,Tracheophyta,Magnoliopsida,Rosales,Rosaceae,Prunus,Prunus domestica,d7dddbf4-2cf0-4f39-9b2a-bb099caae36c,7931731,Prunus domestica,Prunus domestica domestica,L.,SCIENTIFIC,SUBSPECIES,ACCEPTED,,,9ff7d317-609b-4c08-bd86-3bc404b77c42,141265405
6369819,Sambucus canadensis L.,10034700,gbif:6369819,Plantae,Tracheophyta,Magnoliopsida,Dipsacales,Adoxaceae,Sambucus,Sambucus canadensis,d7dddbf4-2cf0-4f39-9b2a-bb099caae36c,2888721,Sambucus,Sambucus canadensis,L.,SCIENTIFIC,SPECIES,ACCEPTED,,,9ff7d317-609b-4c08-bd86-3bc404b77c42,141266437
6374790,Clematis integrifolia L.,2586220,gbif:6374790,Plantae,Tracheophyta,Magnoliopsida,Ranunculales,Ranunculaceae,Clematis,Clematis integrifolia,d7dddbf4-2cf0-4f39-9b2a-bb099caae36c,3033512,Clematis,Clematis integrifolia,L.,SCIENTIFIC,SPECIES,ACCEPTED,,,9ff7d317-609b-4c08-bd86-3bc404b77c42,141266877
6374953,Helleborus orientalis Lam.,5086085,gbif:6374953,Plantae,Tracheophyta,Magnoliopsida,Ranunculales,Ranunculaceae,Helleborus,Helleborus orientalis,d7dddbf4-2cf0-4f39-9b2a-bb099caae36c,2741682,Helleborus,Helleborus orientalis,Lam.,SCIENTIFIC,SPECIES,ACCEPTED,,,9ff7d317-609b-4c08-bd86-3bc404b77c42,141266874
Expand Down Expand Up @@ -2509,7 +2506,7 @@ verificationKey,scientificName,nameKey,taxonID,kingdom,phylum,class,order,family
7225471,Vicia villosa subsp. villosa,11776092,gbif:7225471,Plantae,Tracheophyta,Magnoliopsida,Fabales,Fabaceae,Vicia,Vicia villosa,d7dddbf4-2cf0-4f39-9b2a-bb099caae36c,9182154,Vicia villosa,Vicia villosa villosa,"",SCIENTIFIC,SUBSPECIES,ACCEPTED,,,9ff7d317-609b-4c08-bd86-3bc404b77c42,141266794
7225621,Neslia paniculata subsp. paniculata,7508290,gbif:7225621,Plantae,Tracheophyta,Magnoliopsida,Brassicales,Brassicaceae,Neslia,Neslia paniculata,d7dddbf4-2cf0-4f39-9b2a-bb099caae36c,9040863,Neslia paniculata,Neslia paniculata paniculata,"",SCIENTIFIC,SUBSPECIES,ACCEPTED,,,9ff7d317-609b-4c08-bd86-3bc404b77c42,141266028
7226776,Setaria verticillata var. verticillata,10343833,gbif:7226776,Plantae,Tracheophyta,Liliopsida,Poales,Poaceae,Setaria,Setaria verticillata,d7dddbf4-2cf0-4f39-9b2a-bb099caae36c,5289686,Setaria verticillata,Setaria verticillata verticillata,"",SCIENTIFIC,VARIETY,ACCEPTED,,,9ff7d317-609b-4c08-bd86-3bc404b77c42,141265704
7226804,Avena sterilis subsp. sterilis,1235856,gbif:7226804,Plantae,Tracheophyta,Liliopsida,Poales,Poaceae,Avena,Avena sterilis,d7dddbf4-2cf0-4f39-9b2a-bb099caae36c,2705286,Avena sterilis,Avena sterilis sterilis,"",SCIENTIFIC,SUBSPECIES,ACCEPTED,,,9ff7d317-609b-4c08-bd86-3bc404b77c42,141265790
7226804,Avena sterilis subsp. sterilis,1235856,gbif:7226804,Plantae,Tracheophyta,Liliopsida,Poales,Poaceae,Avena,Avena sterilis,d7dddbf4-2cf0-4f39-9b2a-bb099caae36c,2705286,Avena sterilis,Avena sterilis sterilis,L.,SCIENTIFIC,SUBSPECIES,ACCEPTED,,,9ff7d317-609b-4c08-bd86-3bc404b77c42,141265790
7227181,Carex muricata subsp. muricata,2027689,gbif:7227181,Plantae,Tracheophyta,Liliopsida,Poales,Cyperaceae,Carex,Carex muricata,d7dddbf4-2cf0-4f39-9b2a-bb099caae36c,2722926,Carex muricata,Carex muricata muricata,"",SCIENTIFIC,SUBSPECIES,ACCEPTED,,,9ff7d317-609b-4c08-bd86-3bc404b77c42,141267127
7230699,Pinus nigra subsp. nigra,8770879,gbif:7230699,Plantae,Tracheophyta,Pinopsida,Pinales,Pinaceae,Pinus,Pinus nigra,d7dddbf4-2cf0-4f39-9b2a-bb099caae36c,5284809,Pinus nigra,Pinus nigra nigra,J.F.Arnold,SCIENTIFIC,SUBSPECIES,ACCEPTED,,,9ff7d317-609b-4c08-bd86-3bc404b77c42,141266575
7239373,Uromyces veratri (DC.) J.Schr枚t.,17247814,gbif:7239373,Fungi,Basidiomycota,Pucciniomycetes,Pucciniales,Pucciniaceae,Uromyces,Uromyces veratri,d7dddbf4-2cf0-4f39-9b2a-bb099caae36c,2513550,Uromyces,Uromyces veratri,J.Schr枚t. (DC.),SCIENTIFIC,SPECIES,ACCEPTED,,,b043c480-dd36-4f4f-aa82-e188753ff09d,143610916
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