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It may be that this is as simple as modifying setup.py. I'm not clear on this yet, but py2app for macOS just uses the setup.py configuration, and the icon is just an option that is passed from setup.py to py2app. I wonder if it's possible to use a single setup.py for all OS's, or if we'll have to make a special one for each...
Using additional parameters in setup.py should mostly be neutral with respect to other OS's, so I wouldn't expect anything preventing us from a single setup.py there.
See also discussion in #7
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