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* README: Added ebib dependency
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Tom Dye committed Jul 12, 2011
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Expand Up @@ -29,28 +29,32 @@ relevant calculations, and generating the referenced figures.
4. Your R installation must include the ggplot2 package,
http://had.co.nz/ggplot2/

5. Emacs Speaks Statistics (ESS) provides support for communication
5. The ability to jump to bibliographic entries from citations in the
Org-mode file depends on ebib, http://ebib.sourceforge.net/

6. Emacs Speaks Statistics (ESS) provides support for communication
between Emacs and a persistent R process. To install ESS download
the source code from http://ess.r-project.org/ -- this paper was
tested with version 5.13. Unpack the download into a directory on
your machine, and update the `ess-path' variable on the second line
of init.el in this directory to point to your local ess/lisp/
directory.

6. Alternatively, follow steps 6 through 9 or call make from within
the directory that holds colonization.org.
7. Alternatively, follow steps 8 through 11 or call make from within
the directory that holds colonization.org. The make program will
create the file colonization.pdf.

7. From the command line, cd into the directory that holds colonization.org
8. From the command line, cd into the directory that holds colonization.org
and then launch Emacs using the following command

: emacs -Q -l init.el colonization.org

8. The resulting Emacs window will be visiting the Org-mode file,
9. The resulting Emacs window will be visiting the Org-mode file,
colonization.org. From here it is possible to navigate and edit the
document, and to inspect and evaluate source code blocks.

9. Export the document to LaTeX with the M-x org-export-as-latex
10. Export the document to LaTeX with the M-x org-export-as-latex
command---just press RET in reply to queries from R.

10. The resulting colonization.tex file can be built from the command line
11. The resulting colonization.tex file can be built from the command line
with pdflatex and bibtex.

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