re-write convert_to_netCDF to deal with directories with more that one file type

[tsherwen]

Currently convert_to_netCDF will not work on directories that contain a mixture of timestptamp files (ts*.bpch), ctm output (ctm.bpch or trac), HEMCO etc. This should be updated to process only the file type that convert_to_netCDF is called for and have a option to process all output.

[BenNewsome]

I am not sure I follow.

Are you saying the convert_to_netCDF does not work if you have say 201202.bpch and a file called ctm.bpch in the same folder?

[tsherwen]

Yes. So I think using a glob.glob call to make lists of the difference file
types would be a good idea. I think default behavior should be to process
the file type called for (e.g. ctm.bpch), but an option should be there to
try and process all file types.

On 10 November 2016 at 13:27, Ben Newsome notifications@github.com wrote:

I am not sure I follow.

Are you saying the convert_to_netCDF does not work if you have say
201202.bpch and a file called ctm.bpch in the same folder?

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Dr Tomás Sherwen
Postdoctoral Research Associate

Wolfson Atmospheric Chemistry Laboratories (WACL)
Department of Chemistry, University of York
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Office phone (shared): +44(0)1904 324758
Homepage: https://www.york.ac.uk/chemistry/staff/resstaff/sherwent/
tomas.sherwen@york.ac.uk [image: tomas.sherwen]
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https://scholar.google.co.uk/citations?user=e3SmNJoAAAAJ&hl

[BenNewsome]

Updated to allow filetype to be specified (So you can do ' *.ctm.bpch' or ' *.bpch')

Not tested properly, but it should work with whatever format you like.