Computational model simulating RNA polymerase I transcription (update 2023)
The model was run in Matlab, and can be run using software accepting parallel computing i.e. Matlab (require Parallel Computing Toolbox) or Octave (free license, interprets parfor as for).
To run simulation user have to provide a runParameters.csv file. Example has been attached to this repository (runParameters_example.csv).
To execute simulation run RunModels.m script.
Output data will be stored in Data folder.
Benjamin D. Goddard and Tomasz W. Turowski