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Center for Computational Genomics and Data Science (CGDS)

Hi there 👋

The Center for Computational Genomics and Data Science (CGDS) seeks to develop and apply tools and methods to uncover new and novel information that provide benefits for patients suffering from rare, undiagnosed, or misdiagnosed diseases, their families, and the people that care for them.

Click here for an organized list and description of all CGDS repos.

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  1. rosalution rosalution Public

    Rosalution assists researchers study genetic variation 🧬 in patients 🧑🏾‍🤝‍🧑🏼 by helping select candidate animal models 🐀🐁🐠🪱 to replicate the variation to further research to derive, diagnose, and p…

    JavaScript 9 1

  2. quac quac Public

    🦆 Quality Control of WGS and exome samples 🦆

    Python 4 1

  3. DITTO-UI DITTO-UI Public

    Easy to use web interface for biologists to look for genetic variants and understand their deleteriousness using DITTO scores.

    Python 3

Repositories

Showing 10 of 10 repositories
  • rosalution Public

    Rosalution assists researchers study genetic variation 🧬 in patients 🧑🏾‍🤝‍🧑🏼 by helping select candidate animal models 🐀🐁🐠🪱 to replicate the variation to further research to derive, diagnose, and provide therapies for ultra-rare diseases. Developed by the UAB Center for Computational Genomics and Data Science (CGDS).

    JavaScript 9 GPL-3.0 1 2 (2 issues need help) 1 Updated Apr 25, 2024
  • DITTO Public

    Variant Deleteriousness prediction tool using AI

    Jupyter Notebook 1 GPL-3.0 0 0 0 Updated Apr 23, 2024
  • cgds-domain-home-page Public

    The base HTML page and to be packaged and deployed to cgds.uab.edu

    CSS 0 0 0 0 Updated Apr 12, 2024
  • DITTO-API Public

    This is the API for serving up DITTO scores and hosting on Cloud.rc at UAB.

    Python 0 GPL-3.0 0 0 0 Updated Apr 7, 2024
  • DITTO-UI Public

    Easy to use web interface for biologists to look for genetic variants and understand their deleteriousness using DITTO scores.

    Python 3 GPL-3.0 0 3 0 Updated Apr 7, 2024
  • learnings_journal Public

    Tips and tricks we learn at CGDS to get stuff working

    Python 2 0 0 0 Updated Feb 16, 2024
  • quac Public

    🦆 Quality Control of WGS and exome samples 🦆

    Python 4 GPL-3.0 1 17 0 Updated Jan 10, 2024
  • shareops-self-hosted-runners-demo Public

    Weeeeeeeeeeeeeeeeeeeeeeeeeeeeeeeeeeeeee

    0 LGPL-2.1 0 0 0 Updated Aug 8, 2023
  • .github Public

    The Center for Computational Genomics and Data Science (CGDS) seeks to develop and apply tools and methods to uncover new and novel information that provide benefits for patients suffering from rare, undiagnosed, or misdiagnosed diseases, their families, and the people that care for them.

    0 0 0 0 Updated Jun 23, 2023
  • mixoviz Public Forked from HudsonAlpha/mixoviz

    Detection and visualization of 2n/3n mixoploidy from a VCF

    Python 0 2 0 0 Updated May 20, 2021

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