Skip to content
New issue

Have a question about this project? Sign up for a free GitHub account to open an issue and contact its maintainers and the community.

Sign up for GitHub

By clicking “Sign up for GitHub”, you agree to our terms of service and privacy statement. We’ll occasionally send you account related emails.

Already on GitHub? Sign in to your account

Jump to bottom

Peptide nodes with alt splice deletion should be treated differently when collapsing #580

Closed
zhuchcn opened this issue Oct 10, 2022 · 0 comments · Fixed by #579
Closed

Peptide nodes with alt splice deletion should be treated differently when collapsing #580

zhuchcn opened this issue Oct 10, 2022 · 0 comments · Fixed by #579

Comments

@zhuchcn
Copy link
Member

zhuchcn commented Oct 10, 2022

When collapsing nodes with the same sequence in the PeptideVariantGraph after enzymatic cleaving, nodes with alt splice deletion should be treated differently otherwise the peptide sequence may be missed.
Sign up for free to join this conversation on GitHub. Already have an account? Sign in to comment
Assignees
No one assigned
Labels
None yet
Projects
None yet
Milestone
No milestone
Development

Successfully merging a pull request may close this issue.

Fix several more issues of Fusion and circRNA uclahs-cds/package-moPepGen
1 participant
@zhuchcn