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Failed to create validator: org.topbraid.shacl.validation.SHACLException: Invalid SPARQL constraint #513

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DrSnowbird opened this issue Jan 9, 2023 · 1 comment · Fixed by #514
Closed
8 tasks done

Failed to create validator: org.topbraid.shacl.validation.SHACLException: Invalid SPARQL constraint #513

DrSnowbird opened this issue Jan 9, 2023 · 1 comment · Fixed by #514
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bug
Milestone
UCO 1.2.0

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@DrSnowbird
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DrSnowbird commented Jan 9, 2023 •
edited by ajnelson-nist

Bug description

Tool transcript:

Failed to create validator: org.topbraid.shacl.validation.SHACLException: Invalid SPARQL constraint (Line 5, column 41: Unresolved prefixed name: rdfs:subClassOf):\n\n\t\t\tPREFIX uco-core: <https://ontology.unifiedcyberontology.org/uco/core/>\n\t\t\tSELECT $this\n\t\t\tWHERE {\n\t\t\t        $this a/rdfs:subClassOf* uco-core:UcoThing .\n\t\t\t        FILTER (\n\t\t\t                ! REGEX (\n\t\t\t                        STR($this),\n\t\t\t                        \"[0-9a-f]{8}-[0-9a-f]{4}-[0-5][0-9a-f]{3}-[0-9a-f]{4}-[0-9a-f]{12}$\",\n\t\t\t                        \"i\"\n\t\t\t                )\n\t\t\t        )

Steps to reproduce

Steps to reproduce the behavior.

  1. Use Topbraid SHACL validator to load UCO v1.1.0 Shapes and then,
  2. Use the input sample: "https://raw.githubusercontent.com/casework/CASE-Examples/master/examples/illustrations/location/location.json"
  3. The results will come back to report the failure as "Failed to create validator: org.topbraid.shacl.validation.SHACLException: Invalid SPARQL constraint". -- Please see the attachment JSON file (the response using SHACL validator Service)

UCO-v1-1-0-SHACL-Exception (copy).txt

Coordination

  • Tracking in Jira ticket OC-287
  • Administrative review completed, proposal announced to Ontology Committees (OCs) on 2023-01-17
  • Solution announced to OCs on 2023-01-17
  • Solutions development phase completed.
  • Backwards-compatible implementation merged into develop for the next release
  • develop state with backwards-compatible implementation merged into develop-2.0.0
  • Backwards-incompatible implementation merged into develop-2.0.0 (N/A)
  • Milestone linked
  • Documentation logged in pending release page
@DrSnowbird DrSnowbird added the bug label Jan 9, 2023
@ajnelson-nist
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It appears there's a disagreement between the tool you used and rdflib on what the guaranteed RDF prefixes are. It looks like we need to add explicit rdfs declarations to each of the SHACL-SPARQL constraints.

@DrSnowbird , thank you for the bug report, we'll schedule it for the next release.

@ajnelson-nist ajnelson-nist added this to the UCO 1.2.0 milestone Jan 9, 2023
@ajnelson-nist ajnelson-nist linked a pull request Jan 13, 2023 that will close this issue
Bug fix 513 #514
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11 tasks
@ajnelson-nist ajnelson-nist mentioned this issue Jan 13, 2023
Merged
11 tasks
ajnelson-nist added a commit that referenced this issue Jan 18, 2023
@ajnelson-nist
Regenerate Make-managed files
494c4ad 
References:
* #513

Signed-off-by: Alex Nelson <alexander.nelson@nist.gov>
ajnelson-nist added a commit to casework/CASE-Archive that referenced this issue Jan 18, 2023
@ajnelson-nist
Bump UCO unstable pointer
18fe007 
No effects were observed on Make-managed files.

References:
* ucoProject/UCO#513

Signed-off-by: Alex Nelson <alexander.nelson@nist.gov>
ajnelson-nist added a commit to casework/CASE-Examples that referenced this issue Jan 18, 2023
@ajnelson-nist
Bump unstable pointers
314ca12 
No effects were observed on Make-managed files.

References:
* ucoProject/UCO#513

Signed-off-by: Alex Nelson <alexander.nelson@nist.gov>
ajnelson-nist added a commit to casework/CASE-Examples that referenced this issue Jan 18, 2023
@ajnelson-nist
Bump unstable pointers
8d31d60 
A follow-on patch will regenerate Make-managed files.

References:
* ucoProject/UCO#513

Signed-off-by: Alex Nelson <alexander.nelson@nist.gov>
ajnelson-nist added a commit to casework/CASE-Examples that referenced this issue Jan 18, 2023
@ajnelson-nist
Regenerate Make-managed files
33e4262 
References:
* ucoProject/UCO#513

Signed-off-by: Alex Nelson <alexander.nelson@nist.gov>
ajnelson-nist added a commit to casework/casework.github.io that referenced this issue Jan 18, 2023
@ajnelson-nist
Bump unstable pointers
68add5b 
A follow-on patch will regenerate Make-managed files.

References:
* ucoProject/UCO#513

Signed-off-by: Alex Nelson <alexander.nelson@nist.gov>
ajnelson-nist added a commit to casework/casework.github.io that referenced this issue Jan 18, 2023
@ajnelson-nist
Regenerate Make-managed files
4fb6dde 
References:
* ucoProject/UCO#513

Signed-off-by: Alex Nelson <alexander.nelson@nist.gov>
@ajnelson-nist ajnelson-nist linked a pull request Jan 27, 2023 that will close this issue
Issue 501: Catch develop-2.0.0 up to develop #515
Merged
4 tasks
@ajnelson-nist ajnelson-nist removed a link to a pull request Jan 30, 2023
Issue 501: Catch develop-2.0.0 up to develop #515
Merged
4 tasks
ajnelson-nist added a commit to casework/CASE-Utilities-Python that referenced this issue Mar 28, 2023
@ajnelson-nist
Regenerate Make-managed files.
24e763b 
References:
* ucoProject/UCO#508
* ucoProject/UCO#513
* ucoProject/UCO#526

Signed-off-by: Alex Nelson <alexander.nelson@nist.gov>
@ajnelson-nist ajnelson-nist mentioned this issue Apr 26, 2023
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Bug fix 513 ucoProject/UCO
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