HYPHAEdelity is an application created by Dr. Lisa Rogers and Scott Britton to automate the assessment of two-dimensional whole colony images and quantify the magnitude of peripheral whole colony yeast filamentation. The software application functions by determining the total area of filamentous growth, referred to as the f-measure, utilizing image analysis tools intrinsic to the OpenCV Python library. The data from this analysis is output as a set of binary files and a single statistics-containing csv file.
- Python -v3.9.11
- OpenCV -v4.5.1
- Numpy -v1.19.2
- Pandas - v1.2.3
- matplotlib -v3.3.2
V1 of App now available for download in github.com/unstablelimitcycle/hyphaeDetection/hyphaedelityGUI.app/Contents/MacOS/hyphaeDelityGUI .