Skip to content

Commit

Permalink
updateEG
Browse files Browse the repository at this point in the history
  • Loading branch information
urmi-21 committed Feb 19, 2020
1 parent 7bb6060 commit 1127485
Show file tree
Hide file tree
Showing 2 changed files with 10 additions and 0 deletions.
3 changes: 3 additions & 0 deletions examples(case-studies)/Human_annotation_snakemake/README.md
Original file line number Diff line number Diff line change
Expand Up @@ -15,3 +15,6 @@ and merge the multiple assemblies with Mikado.
* Activate the environment: `conda activate pyrpipe_human`
* Execute Snakemake workflow: `snakemake -j <num threads>`

### To execute on a cluster with slurm

`snakemake -j 5 --cluster-config cluster.json --cluster "sbatch -t {cluster.time} -c 28`
Original file line number Diff line number Diff line change
@@ -0,0 +1,7 @@
{
"__default__":
{
"time": "12:00:00",
"procs": "28"
}
}

0 comments on commit 1127485

Please sign in to comment.