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| Original file line number | Diff line number | Diff line change |
|---|---|---|
| @@ -0,0 +1,148 @@ | ||
| name: pyrpipe_test | ||
| channels: | ||
| - conda-forge | ||
| - bioconda | ||
| - defaults | ||
| dependencies: | ||
| - _libgcc_mutex=0.1=main | ||
| - bbmap=38.76=h516909a_0 | ||
| - blas=1.0=mkl | ||
| - bowtie=1.2.3=py37hc9558a2_0 | ||
| - bowtie2=2.3.5.1=py37he513fc3_0 | ||
| - bz2file=0.98=py37_1 | ||
| - bzip2=1.0.8=h7b6447c_0 | ||
| - ca-certificates=2020.1.1=0 | ||
| - certifi=2019.11.28=py37_0 | ||
| - curl=7.68.0=hbc83047_0 | ||
| - cutadapt=1.18=py37h14c3975_1 | ||
| - fastqc=0.11.9=0 | ||
| - font-ttf-dejavu-sans-mono=2.37=h6964260_0 | ||
| - fontconfig=2.13.0=h9420a91_0 | ||
| - freetype=2.9.1=h8a8886c_1 | ||
| - hdf5=1.10.2=hba1933b_1 | ||
| - hisat2=2.1.0=py37hc9558a2_4 | ||
| - htslib=1.9=h4da6232_3 | ||
| - icu=58.2=h9c2bf20_1 | ||
| - intel-openmp=2020.0=166 | ||
| - kallisto=0.44.0=h7d86c95_2 | ||
| - kmer-jellyfish=2.3.0=hc9558a2_1 | ||
| - krb5=1.17.1=h173b8e3_0 | ||
| - ld_impl_linux-64=2.33.1=h53a641e_7 | ||
| - libcurl=7.68.0=h20c2e04_0 | ||
| - libdeflate=1.2=h516909a_1 | ||
| - libedit=3.1.20181209=hc058e9b_0 | ||
| - libffi=3.2.1=hd88cf55_4 | ||
| - libgcc-ng=9.1.0=hdf63c60_0 | ||
| - libgfortran-ng=7.3.0=hdf63c60_0 | ||
| - libiconv=1.15=h63c8f33_5 | ||
| - libpng=1.6.37=hbc83047_0 | ||
| - libssh2=1.8.2=h1ba5d50_0 | ||
| - libstdcxx-ng=9.2.0=hdf63c60_2 | ||
| - libuuid=1.0.3=h1bed415_2 | ||
| - libxml2=2.9.9=hea5a465_1 | ||
| - mkl=2020.0=166 | ||
| - mkl-service=2.3.0=py37he904b0f_0 | ||
| - mkl_fft=1.0.15=py37ha843d7b_0 | ||
| - mkl_random=1.1.0=py37hd6b4f25_0 | ||
| - ncbi-ngs-sdk=2.10.0=hdf6179e_0 | ||
| - ncurses=6.1=he6710b0_1 | ||
| - numpy-base=1.18.1=py37hde5b4d6_1 | ||
| - openjdk=8.0.152=h7b6447c_2 | ||
| - openssl=1.1.1d=h7b6447c_4 | ||
| - pandas=1.0.1=py37h0573a6f_0 | ||
| - perl=5.26.2=h14c3975_0 | ||
| - perl-app-cpanminus=1.7044=pl526_1 | ||
| - perl-business-isbn=3.004=pl526_0 | ||
| - perl-business-isbn-data=20140910.003=pl526_0 | ||
| - perl-carp=1.38=pl526_3 | ||
| - perl-constant=1.33=pl526_1 | ||
| - perl-data-dumper=2.173=pl526_0 | ||
| - perl-encode=2.88=pl526_1 | ||
| - perl-exporter=5.72=pl526_1 | ||
| - perl-extutils-makemaker=7.36=pl526_1 | ||
| - perl-file-path=2.16=pl526_0 | ||
| - perl-file-temp=0.2304=pl526_2 | ||
| - perl-mime-base64=3.15=pl526_1 | ||
| - perl-parent=0.236=pl526_1 | ||
| - perl-uri=1.76=pl526_0 | ||
| - perl-xml-libxml=2.0132=pl526h7ec2d77_1 | ||
| - perl-xml-namespacesupport=1.12=pl526_0 | ||
| - perl-xml-sax=1.02=pl526_0 | ||
| - perl-xml-sax-base=1.09=pl526_0 | ||
| - perl-xsloader=0.24=pl526_0 | ||
| - pigz=2.4=h84994c4_0 | ||
| - pip=20.0.2=py37_1 | ||
| - python=3.7.6=h0371630_2 | ||
| - python-dateutil=2.8.1=py_0 | ||
| - pytz=2019.3=py_0 | ||
| - readline=7.0=h7b6447c_5 | ||
| - salmon=0.14.2=ha0cc327_0 | ||
| - samtools=1.9=h10a08f8_12 | ||
| - setuptools=45.2.0=py37_0 | ||
| - six=1.14.0=py37_0 | ||
| - sqlite=3.31.1=h7b6447c_0 | ||
| - sra-tools=2.10.0=pl526he1b5a44_0 | ||
| - star=2.7.3a=0 | ||
| - stringtie=2.1.1=hc900ff6_0 | ||
| - tabulate=0.8.3=py37_0 | ||
| - tbb=2020.0=hfd86e86_0 | ||
| - tk=8.6.8=hbc83047_0 | ||
| - trim-galore=0.6.5=0 | ||
| - trimmomatic=0.39=1 | ||
| - trinity=2.9.1=h8b12597_0 | ||
| - wheel=0.34.2=py37_0 | ||
| - xopen=0.7.3=py_0 | ||
| - xz=5.2.4=h14c3975_4 | ||
| - zlib=1.2.11=h7b6447c_3 | ||
| - portcullis==1.1.2 | ||
| - pip: | ||
| - attrs==19.3.0 | ||
| - cairocffi==1.1.0 | ||
| - cairosvg==2.4.2 | ||
| - cffi==1.14.0 | ||
| - chardet==3.0.4 | ||
| - click==7.0 | ||
| - coloredlogs==14.0 | ||
| - colormath==3.0.0 | ||
| - cssselect2==0.2.2 | ||
| - cycler==0.10.0 | ||
| - decorator==4.4.1 | ||
| - defusedxml==0.6.0 | ||
| - dill==0.3.1.1 | ||
| - future==0.18.2 | ||
| - html5lib==1.0.1 | ||
| - humanfriendly==7.1.1 | ||
| - idna==2.8 | ||
| - importlib-metadata==1.5.0 | ||
| - importlib-resources==1.0.2 | ||
| - jinja2==2.11.1 | ||
| - kiwisolver==1.1.0 | ||
| - lzstring==1.0.4 | ||
| - markdown==3.2.1 | ||
| - markupsafe==1.1.1 | ||
| - matplotlib==3.1.1 | ||
| - more-itertools==8.2.0 | ||
| - multiqc==1.8 | ||
| - networkx==2.4 | ||
| - numpy==1.18.1 | ||
| - packaging==20.1 | ||
| - pillow==7.0.0 | ||
| - pluggy==0.13.1 | ||
| - py==1.8.1 | ||
| - pycparser==2.19 | ||
| - pyparsing==2.4.6 | ||
| - pyphen==0.9.5 | ||
| - pyrpipe==0.0.3 | ||
| - pytest==5.3.5 | ||
| - pyyaml==5.3 | ||
| - requests==2.22.0 | ||
| - scipy==1.4.1 | ||
| - seaborn==0.10.0 | ||
| - simplejson==3.17.0 | ||
| - spectra==0.0.11 | ||
| - tinycss2==1.0.2 | ||
| - urllib3==1.25.8 | ||
| - wcwidth==0.1.8 | ||
| - weasyprint==51 | ||
| - webencodings==0.5.1 | ||
| - zipp==3.0.0 |