update docs

urmi-21 · Mar 30, 2020 · aa0e22f · aa0e22f
1 parent aa70e41
commit aa0e22f
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Showing 2 changed files with 2 additions and 2 deletions.
diff --git a/pyrpipe/mapping.py b/pyrpipe/mapping.py
@@ -507,7 +507,7 @@ def perform_alignment(self,sra_object,out_suffix="_star",out_dir="",threads=None
         newOpts["--genomeDir"]=self.star_index
 
 
-        #add input files to kwargs, overwrite kwargs with newOpts
+        #add input files to kwargs, overwrite newOpts with kwargs
         mergedOpts={**newOpts,**kwargs}
 
         #call star

diff --git a/pyrpipe/sra.py b/pyrpipe/sra.py
@@ -37,7 +37,7 @@ class SRA:
         """
     def __init__(self,srr_accession=None, location=None, threads=None):
 
-        if location is None and srr_accession is None:
+        if (location is None) and (srr_accession is None):
             #pu.print_boldred("Please provide a valid srr accession or location, or both")
             raise Exception("Please provide a valid srr accession or location, or both")
             #use the scan_path to create sra object