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urmi-21 committed Jan 18, 2021
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py.test tests/test_*
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## Setting NCBI SRA Toolkit
If you face problems with downloading data from SRA, try configuring the SRA Toolkit.
## Setting NCBI SRA-Tools
If you face problems with downloading data from SRA, try configuring the SRA-Tools.
Use ```vdb-config -i``` to configure SRA Toolkit. Make sure that:

* Under the **TOOLS** tab, prefetch downloads to is set to public user-repository
* Under the **CACHE** tab, location of public user-repository is not empty

Use the following pyrpipe_diagnostic command to test if SRA-Tools are setup properly

```
pyrpipe_diagnostic test
```

## Funding

This work is funded in part by the National Science Foundation award IOS 1546858, "Orphan Genes: An Untapped Genetic Reservoir of Novel Traits".
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