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urmi-21 · Jan 4, 2021 · da7caf2 · da7caf2
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diff --git a/case_studies/Covid_RNA-Seq/README.md b/case_studies/Covid_RNA-Seq/README.md
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-# Introduction
 
 ## Integrating pyrpipe scripts within a workflow management system (Snakemake)
 We embedded pyrpipe into the Snakemake workflow management system, using it to download COVID-19 infected human RNA-Seq data.
+Data used here is from [Rother et. al.](https://www.medrxiv.org/content/10.1101/2020.06.08.20122143v1) published under accession [SRP287810](https://trace.ncbi.nlm.nih.gov/Traces/sra/?study=SRP287810).
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 We use salmon to quantify the RNA-Seq samples and compile The transcripts TPMs for exploratory analysis with [MetaOmGraph](https://github.com/urmi-21/MetaOmGraph)
 The final output file of this workflow, `results_TPM.tsv`, can be directly imported in MetaOmGraph together with the metadata file.
 

diff --git a/case_studies/Snakemake_example/README → case_studies/Snakemake_example/README.md b/case_studies/Snakemake_example/README → case_studies/Snakemake_example/README.md