Crossbow #186129
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| # Licensed to the Apache Software Foundation (ASF) under one | |
| # or more contributor license agreements. See the NOTICE file | |
| # distributed with this work for additional information | |
| # regarding copyright ownership. The ASF licenses this file | |
| # to you under the Apache License, Version 2.0 (the | |
| # "License"); you may not use this file except in compliance | |
| # with the License. You may obtain a copy of the License at | |
| # | |
| # http://www.apache.org/licenses/LICENSE-2.0 | |
| # | |
| # Unless required by applicable law or agreed to in writing, | |
| # software distributed under the License is distributed on an | |
| # "AS IS" BASIS, WITHOUT WARRANTIES OR CONDITIONS OF ANY | |
| # KIND, either express or implied. See the License for the | |
| # specific language governing permissions and limitations | |
| # under the License. | |
| # NOTE: must set "Crossbow" as name to have the badge links working in the | |
| # github comment reports! | |
| name: Crossbow | |
| on: | |
| push: | |
| branches: | |
| - "*-github-*" | |
| jobs: | |
| source: | |
| # This job will change the version to either the custom_version param or YMD format. | |
| # The output allows other steps to use the exact version to prevent issues (e.g. date changes during run) | |
| name: Source Package | |
| runs-on: ubuntu-latest | |
| outputs: | |
| pkg_version: ${{ steps.save-version.outputs.pkg_version }} | |
| steps: | |
| - name: Checkout Arrow | |
| uses: actions/checkout@v4 | |
| with: | |
| fetch-depth: 1 | |
| path: arrow | |
| repository: paleolimbot/arrow | |
| ref: 9b9186aa2f75d6cbe354369aa9e7d4e0c9a86041 | |
| submodules: recursive | |
| - name: Modify version | |
| shell: bash | |
| run: | | |
| cd arrow/r | |
| sed -i.bak -E -e \ | |
| 's/(^Version: )([0-9]+\.[0-9]+\.[0-9]+).*$/\113.0.0.100000428/' \ | |
| DESCRIPTION | |
| head DESCRIPTION | |
| rm -f DESCRIPTION.bak | |
| - name: Save Version | |
| id: save-version | |
| shell: bash | |
| run: | | |
| echo "pkg_version=$(grep ^Version arrow/r/DESCRIPTION | sed s/Version:\ //)" >> $GITHUB_OUTPUT | |
| - uses: r-lib/actions/setup-r@v2 | |
| with: | |
| install-r: false | |
| - name: Build R source package | |
| shell: bash | |
| run: | | |
| cd arrow/r | |
| # Copy in the Arrow C++ source | |
| make sync-cpp | |
| R CMD build --no-build-vignettes . | |
| - name: Upload package artifact | |
| uses: actions/upload-artifact@v3 | |
| with: | |
| name: r-pkg__src__contrib | |
| path: arrow/r/arrow_*.tar.gz | |
| macos-cpp: | |
| name: C++ Binary macOS OpenSSL ${{ matrix.openssl }} ${{ matrix.platform.arch }} | |
| runs-on: ${{ matrix.platform.runs_on }} | |
| needs: source | |
| strategy: | |
| fail-fast: false | |
| matrix: | |
| platform: | |
| - { runs_on: ["self-hosted", "macos-10.13"], arch: "x86_64" } | |
| - { runs_on: ["self-hosted", "macOS", "arm64", "devops-managed"], arch: "arm64" } | |
| openssl: ['3.0', '1.1'] | |
| steps: | |
| - name: Checkout Arrow | |
| uses: actions/checkout@v3 | |
| with: | |
| fetch-depth: 1 | |
| path: arrow | |
| repository: paleolimbot/arrow | |
| ref: 9b9186aa2f75d6cbe354369aa9e7d4e0c9a86041 | |
| submodules: recursive | |
| - name: Modify version | |
| shell: bash | |
| run: | | |
| cd arrow/r | |
| sed -i.bak -E -e \ | |
| 's/(^Version: )([0-9]+\.[0-9]+\.[0-9]+).*$/\1${{ needs.source.outputs.pkg_version }}/' \ | |
| DESCRIPTION | |
| head DESCRIPTION | |
| rm -f DESCRIPTION.bak | |
| - name: Install Deps | |
| if: ${{ !contains(matrix.platform.runs_on, 'macos-10.13') }} | |
| run: | | |
| brew install sccache ninja | |
| brew install openssl@${{ matrix.openssl }} | |
| - name: Build libarrow | |
| shell: bash | |
| env: | |
| AWS_ACCESS_KEY_ID: "${{ secrets.AWS_ACCESS_KEY_ID }}" | |
| AWS_SECRET_ACCESS_KEY: "${{ secrets.AWS_SECRET_ACCESS_KEY }}" | |
| SCCACHE_BUCKET: "${{ secrets.SCCACHE_BUCKET }}" | |
| SCCACHE_REGION: "${{ secrets.SCCACHE_REGION }}" | |
| SCCACHE_S3_KEY_PREFIX: "sccache" | |
| MACOSX_DEPLOYMENT_TARGET: "10.13" | |
| ARROW_S3: ON | |
| ARROW_GCS: ON | |
| ARROW_DEPENDENCY_SOURCE: BUNDLED | |
| CMAKE_GENERATOR: Ninja | |
| LIBARROW_MINIMAL: false | |
| run: | | |
| sccache --start-server | |
| export EXTRA_CMAKE_FLAGS="-DOPENSSL_ROOT_DIR=$(brew --prefix openssl@${{ matrix.openssl }})" | |
| cd arrow | |
| r/inst/build_arrow_static.sh | |
| - name: Bundle libarrow | |
| shell: bash | |
| env: | |
| PKG_FILE: arrow-${{ needs.source.outputs.pkg_version }}.zip | |
| VERSION: ${{ needs.source.outputs.pkg_version }} | |
| run: | | |
| cd arrow/r/libarrow/dist | |
| zip -r $PKG_FILE lib/ include/ | |
| - name: Create Checksum | |
| shell: bash | |
| run: | | |
| cd arrow/r/libarrow/dist | |
| shasum -a 512 arrow-*.zip > arrow-${{ needs.source.outputs.pkg_version }}.zip.sha512 | |
| - name: Upload binary artifact | |
| uses: actions/upload-artifact@v3 | |
| with: | |
| name: r-lib__libarrow__bin__darwin-${{ matrix.platform.arch }}-openssl-${{ matrix.openssl }} | |
| path: arrow/r/libarrow/dist/arrow-*.zip* | |
| linux-cpp: | |
| name: C++ Binary Linux OpenSSL ${{ matrix.openssl }} | |
| runs-on: ubuntu-latest | |
| needs: source | |
| strategy: | |
| fail-fast: false | |
| matrix: | |
| include: | |
| - openssl: "3.0" | |
| os: ubuntu | |
| ubuntu: "22.04" | |
| - extra-cmake-flags: >- | |
| -DCMAKE_INCLUDE_PATH=/usr/include/openssl11 | |
| -DCMAKE_LIBRARY_PATH=/usr/lib64/openssl11 | |
| openssl: "1.1" | |
| os: centos | |
| - openssl: "1.0" | |
| os: centos | |
| steps: | |
| - name: Checkout Arrow | |
| uses: actions/checkout@v4 | |
| with: | |
| fetch-depth: 1 | |
| path: arrow | |
| repository: paleolimbot/arrow | |
| ref: 9b9186aa2f75d6cbe354369aa9e7d4e0c9a86041 | |
| submodules: recursive | |
| - name: Modify version | |
| shell: bash | |
| run: | | |
| cd arrow/r | |
| sed -i.bak -E -e \ | |
| 's/(^Version: )([0-9]+\.[0-9]+\.[0-9]+).*$/\1${{ needs.source.outputs.pkg_version }}/' \ | |
| DESCRIPTION | |
| head DESCRIPTION | |
| rm -f DESCRIPTION.bak | |
| - name: Set up Python by actions/setup-python | |
| if: runner.arch == 'X64' | |
| uses: actions/setup-python@v4 | |
| with: | |
| cache: 'pip' | |
| python-version: 3.8 | |
| - name: Set up Python by apt | |
| if: runner.os == 'Linux' && runner.arch != 'X64' | |
| run: | | |
| sudo apt update | |
| sudo apt-get install -y python3-pip | |
| pip install -U pip | |
| echo "$HOME/.local/bin" >>"$GITHUB_PATH" | |
| - name: Install Archery | |
| shell: bash | |
| run: pip install -e arrow/dev/archery[all] | |
| - name: Build libarrow | |
| shell: bash | |
| env: | |
| UBUNTU: "${{ matrix.ubuntu }}" | |
| AWS_ACCESS_KEY_ID: "${{ secrets.AWS_ACCESS_KEY_ID }}" | |
| AWS_SECRET_ACCESS_KEY: "${{ secrets.AWS_SECRET_ACCESS_KEY }}" | |
| SCCACHE_BUCKET: "${{ secrets.SCCACHE_BUCKET }}" | |
| SCCACHE_REGION: "${{ secrets.SCCACHE_REGION }}" | |
| SCCACHE_S3_KEY_PREFIX: "sccache" | |
| run: | | |
| sudo sysctl -w kernel.core_pattern="core.%e.%p" | |
| ulimit -c unlimited | |
| archery docker run \ | |
| -e EXTRA_CMAKE_FLAGS="${{ matrix.extra-cmake-flags }}" \ | |
| ${{ matrix.os }}-cpp-static | |
| - name: Bundle libarrow | |
| shell: bash | |
| env: | |
| PKG_FILE: arrow-${{ needs.source.outputs.pkg_version }}.zip | |
| VERSION: ${{ needs.source.outputs.pkg_version }} | |
| run: | | |
| # These files were created by the docker user so we have to chown them | |
| sudo chown -R $USER:$USER arrow/r/libarrow | |
| cd arrow/r/libarrow/dist | |
| zip -r $PKG_FILE lib/ include/ | |
| - name: Create Checksum | |
| shell: bash | |
| run: | | |
| cd arrow/r/libarrow/dist | |
| shasum -a 512 arrow-*.zip > arrow-${{ needs.source.outputs.pkg_version }}.zip.sha512 | |
| - name: Upload binary artifact | |
| uses: actions/upload-artifact@v3 | |
| with: | |
| name: r-lib__libarrow__bin__linux-openssl-${{ matrix.openssl }} | |
| path: arrow/r/libarrow/dist/arrow-*.zip* | |
| windows-cpp: | |
| name: C++ Binary Windows RTools (40 only) | |
| needs: source | |
| runs-on: windows-latest | |
| steps: | |
| - run: git config --global core.autocrlf false | |
| - name: Checkout Arrow | |
| uses: actions/checkout@v4 | |
| with: | |
| fetch-depth: 1 | |
| path: arrow | |
| repository: paleolimbot/arrow | |
| ref: 9b9186aa2f75d6cbe354369aa9e7d4e0c9a86041 | |
| submodules: recursive | |
| - name: Modify version | |
| shell: bash | |
| run: | | |
| cd arrow/r | |
| sed -i.bak -E -e \ | |
| 's/(^Version: )([0-9]+\.[0-9]+\.[0-9]+).*$/\1${{ needs.source.outputs.pkg_version }}/' \ | |
| DESCRIPTION | |
| head DESCRIPTION | |
| rm -f DESCRIPTION.bak | |
| - uses: r-lib/actions/setup-r@v2 | |
| with: | |
| rtools-version: 40 | |
| r-version: "4.0" | |
| Ncpus: 2 | |
| - name: Install sccache | |
| shell: bash | |
| run: arrow/ci/scripts/install_sccache.sh pc-windows-msvc $(pwd)/sccache | |
| - name: Build Arrow C++ with rtools40 | |
| shell: bash | |
| env: | |
| ARROW_HOME: "arrow" | |
| AWS_ACCESS_KEY_ID: "${{ secrets.AWS_ACCESS_KEY_ID }}" | |
| AWS_SECRET_ACCESS_KEY: "${{ secrets.AWS_SECRET_ACCESS_KEY }}" | |
| SCCACHE_BUCKET: "${{ secrets.SCCACHE_BUCKET }}" | |
| SCCACHE_REGION: "${{ secrets.SCCACHE_REGION }}" | |
| SCCACHE_S3_KEY_PREFIX: "sccache" | |
| run: arrow/ci/scripts/r_windows_build.sh | |
| - name: Create Checksum | |
| shell: bash | |
| run: | | |
| cd build | |
| sha512sum arrow-*.zip > arrow-${{ needs.source.outputs.pkg_version }}.zip.sha512 | |
| - name: Upload binary artifact | |
| uses: actions/upload-artifact@v3 | |
| with: | |
| name: r-lib__libarrow__bin__windows | |
| path: build/arrow-*.zip* | |
| r-packages: | |
| needs: [source, windows-cpp, macos-cpp] | |
| name: ${{ matrix.platform.name }} ${{ matrix.r_version.r }} | |
| runs-on: ${{ matrix.platform.runs_on }} | |
| strategy: | |
| fail-fast: false | |
| matrix: | |
| platform: | |
| - { runs_on: 'windows-latest', name: "Windows"} | |
| - { runs_on: ["self-hosted", "macos-10.13"], name: "macOS High Sierra"} | |
| - { runs_on: ["self-hosted", "macOS", "arm64", "devops-managed"], name: "macOS Big Sur" } | |
| r_version: | |
| - { rtools: "42", r: "4.2" } | |
| - { rtools: "40", r: "4.1" } | |
| steps: | |
| - uses: r-lib/actions/setup-r@v2 | |
| # expression marker prevents the ! being parsed as yaml tag | |
| if: ${{ !contains(matrix.platform.runs_on, 'self-hosted') }} | |
| with: | |
| r-version: ${{ matrix.r_version.r }} | |
| rtools-version: ${{ matrix.r_version.rtools }} | |
| - name: Setup R Self-Hosted | |
| if: contains(matrix.platform.runs_on, 'self-hosted') | |
| run: | | |
| if [ "${{ contains(matrix.platform.runs_on, 'arm64') }}" == "true" ]; then | |
| rig_arch="-arm64" | |
| fi | |
| # rig is a system utility that allows for switching | |
| # between pre-installed R version on the self-hosted runners | |
| rig default ${{ matrix.r_version.r }}$rig_arch | |
| rig system setup-user-lib | |
| rig system add-pak | |
| # TODO: improve arg handling | |
| - name: Setup local repo | |
| shell: bash | |
| run: mkdir repo | |
| - name: Get windows binary | |
| uses: actions/download-artifact@v3 | |
| with: | |
| name: r-lib__libarrow__bin__windows | |
| path: repo/libarrow/bin/windows | |
| - name: Get macOS x86_64 OpenSSL 1.1 binary | |
| uses: actions/download-artifact@v3 | |
| with: | |
| name: r-lib__libarrow__bin__darwin-x86_64-openssl-1.1 | |
| path: repo/libarrow/bin/darwin-x86_64-openssl-1.1 | |
| - name: Get macOS arm64 OpenSSL 1.1 binary | |
| uses: actions/download-artifact@v3 | |
| with: | |
| name: r-lib__libarrow__bin__darwin-arm64-openssl-1.1 | |
| path: repo/libarrow/bin/darwin-arm64-openssl-1.1 | |
| - name: Get macOS x86_64 OpenSSL 3.0 binary | |
| uses: actions/download-artifact@v3 | |
| with: | |
| name: r-lib__libarrow__bin__darwin-x86_64-openssl-3.0 | |
| path: repo/libarrow/bin/darwin-x86_64-openssl-3.0 | |
| - name: Get macOS arm64 OpenSSL 3.0 binary | |
| uses: actions/download-artifact@v3 | |
| with: | |
| name: r-lib__libarrow__bin__darwin-arm64-openssl-3.0 | |
| path: repo/libarrow/bin/darwin-arm64-openssl-3.0 | |
| - name: Get src pkg | |
| uses: actions/download-artifact@v3 | |
| with: | |
| name: r-pkg__src__contrib | |
| path: repo/src/contrib | |
| - name: Update repo index | |
| shell: Rscript {0} | |
| run: | | |
| # getwd() is necessary as this macro is used within jobs using a docker container | |
| tools::write_PACKAGES(file.path(getwd(), "repo/src/contrib", fsep = "/"), type = "source", verbose = TRUE) | |
| - name: Show repo | |
| shell: bash | |
| # tree not available in git-bash on windows | |
| run: | | |
| ls -R repo | |
| - name: Add repos to .Rprofile | |
| shell: Rscript {0} | |
| run: | | |
| profile_path <- file.path(getwd(), ".Rprofile") | |
| repo <- paste0("file://", getwd(), "/repo") | |
| str <- paste0("options(arrow.repo = '", repo, "' )") | |
| print(str) | |
| write(str, file = profile_path, append = TRUE) | |
| str <- paste0("options(arrow.dev_repo = '", repo, "' )") | |
| print(str) | |
| write(str, file = profile_path, append = TRUE) | |
| # Set envvar for later steps by appending to $GITHUB_ENV | |
| write(paste0("R_PROFILE_USER=", profile_path), file = Sys.getenv("GITHUB_ENV"), append = TRUE) | |
| - name: Prepare Dependency Installation | |
| shell: bash | |
| run: | | |
| tar -xzf repo/src/contrib/arrow_*.tar.gz arrow/DESCRIPTION | |
| - name: Install dependencies | |
| uses: r-lib/actions/setup-r-dependencies@v2 | |
| with: | |
| working-directory: 'arrow' | |
| extra-packages: cpp11 | |
| - name: Set CRAN like openssl | |
| if: contains(matrix.platform.runs_on, 'arm64') | |
| run: | | |
| # The arm64 runners contain openssl 1.1.1t in this path that is always included first so we need to override the | |
| # default setting of the brew --prefix as root dir to avoid version conflicts. | |
| echo "OPENSSL_ROOT_DIR=/opt/R/arm64" >> $GITHUB_ENV | |
| - name: Build Binary | |
| id: build | |
| shell: Rscript {0} | |
| env: | |
| NOT_CRAN: "false" # actions/setup-r sets this implicitly | |
| ARROW_R_DEV: "true" | |
| LIBARROW_BINARY: "true" # has to be set as long as allowlist not updated | |
| ARROW_R_ENFORCE_CHECKSUM: "true" | |
| ARROW_R_CHECKSUM_PATH: "${{ github.workspace }}/repo/libarrow/bin" | |
| run: | | |
| on_windows <- tolower(Sys.info()[["sysname"]]) == "windows" | |
| # Build | |
| Sys.setenv(MAKEFLAGS = paste0("-j", parallel::detectCores())) | |
| INSTALL_opts <- "--build" | |
| if (!on_windows) { | |
| # Windows doesn't support the --strip arg | |
| INSTALL_opts <- c(INSTALL_opts, "--strip") | |
| } | |
| # always remove arrow (mainly for self-hosted runners) | |
| try(remove.packages("arrow"), silent = TRUE) | |
| cat("Install arrow from dev repo.\n") | |
| install.packages( | |
| "arrow", | |
| type = "source", | |
| # The sub is necessary to prevent an error on windows. | |
| repos = sub("file://", "file:", getOption("arrow.dev_repo")),, | |
| INSTALL_opts = INSTALL_opts | |
| ) | |
| # Test | |
| library(arrow) | |
| arrow_info() | |
| read_parquet(system.file("v0.7.1.parquet", package = "arrow")) | |
| # encode contrib.url for artifact name | |
| cmd <- paste0( | |
| "path=", | |
| gsub( | |
| "/", "__", | |
| contrib.url("", type = "binary") | |
| ), | |
| "\n" | |
| ) | |
| cat(cmd, file = Sys.getenv("GITHUB_OUTPUT"), append = TRUE) | |
| - name: Upload binary artifact | |
| uses: actions/upload-artifact@v3 | |
| with: | |
| name: r-pkg${{ steps.build.outputs.path }} | |
| path: arrow_* | |
| test-linux-binary: | |
| needs: [source, linux-cpp] | |
| name: Test binary ${{ matrix.config.image }} | |
| runs-on: ubuntu-latest | |
| container: ${{ matrix.config.image }} | |
| strategy: | |
| fail-fast: false | |
| matrix: | |
| config: | |
| # If libarrow_binary is unset, we're testing that we're automatically | |
| # choosing a binary on this OS. If libarrow_binary is TRUE, we're on | |
| # an OS that is not in the allowlist, so we have to opt-in to use the | |
| # binary. Other env vars used in r_docker_configure.sh can be added | |
| # here (like devtoolset) and wired up in the later steps. | |
| - {image: "rhub/debian-clang-devel", libarrow_binary: "TRUE"} | |
| # fedora-clang-devel cannot use binaries bc of libc++ (uncomment to see the error) | |
| # - {image: "rhub/fedora-clang-devel", libarrow_binary: "TRUE"} | |
| - {image: "rhub/ubuntu-gcc-release"} # currently ubuntu-20.04 (focal) | |
| - {image: "rocker/r-ubuntu:22.04"} # openssl3 | |
| - {image: "rocker/r-ver"} # whatever is latest ubuntu LTS | |
| - {image: "rocker/r-ver:4.0.0"} # ubuntu-20.04 | |
| - {image: "rocker/r-ver:3.6.3", libarrow_binary: "TRUE"} # debian:buster (10) | |
| - {image: "rstudio/r-base:4.1-focal"} # ubuntu-20.04 | |
| - {image: "rstudio/r-base:4.2-centos7", devtoolset: "8"} | |
| steps: | |
| # Get the arrow checkout just for the docker config scripts | |
| # Don't need submodules for this (hence false arg to macro): they fail on | |
| # actions/checkout for some reason in this context | |
| - name: Checkout Arrow | |
| uses: actions/checkout@v3 | |
| with: | |
| fetch-depth: 1 | |
| path: arrow | |
| repository: paleolimbot/arrow | |
| ref: 9b9186aa2f75d6cbe354369aa9e7d4e0c9a86041 | |
| submodules: False | |
| - name: Install system requirements | |
| env: | |
| ARROW_R_DEV: "TRUE" # To install curl/openssl in r_docker_configure.sh | |
| DEVTOOLSET_VERSION: ${{ matrix.config.devtoolset }} | |
| shell: bash | |
| run: | | |
| # Make sure R is on the path for the R-hub devel versions (where RPREFIX is set in its dockerfile) | |
| echo "${RPREFIX}/bin" >> $GITHUB_PATH | |
| export PATH="${RPREFIX}/bin:${PATH}" | |
| cd arrow && ARROW_SOURCE_HOME=$(pwd) ./ci/scripts/r_docker_configure.sh | |
| # TODO: improve arg handling | |
| - name: Setup local repo | |
| shell: bash | |
| run: mkdir repo | |
| - name: Get Linux OpenSSL 1.0 binary | |
| uses: actions/download-artifact@v3 | |
| with: | |
| name: r-lib__libarrow__bin__linux-openssl-1.0 | |
| path: repo/libarrow/bin/linux-openssl-1.0 | |
| - name: Get Linux OpenSSL 1.1 binary | |
| uses: actions/download-artifact@v3 | |
| with: | |
| name: r-lib__libarrow__bin__linux-openssl-1.1 | |
| path: repo/libarrow/bin/linux-openssl-1.1 | |
| - name: Get Linux OpenSSL 3.0 binary | |
| uses: actions/download-artifact@v3 | |
| with: | |
| name: r-lib__libarrow__bin__linux-openssl-3.0 | |
| path: repo/libarrow/bin/linux-openssl-3.0 | |
| - name: Get src pkg | |
| uses: actions/download-artifact@v3 | |
| with: | |
| name: r-pkg__src__contrib | |
| path: repo/src/contrib | |
| - name: Update repo index | |
| shell: Rscript {0} | |
| run: | | |
| # getwd() is necessary as this macro is used within jobs using a docker container | |
| tools::write_PACKAGES(file.path(getwd(), "repo/src/contrib", fsep = "/"), type = "source", verbose = TRUE) | |
| - name: Show repo | |
| shell: bash | |
| # tree not available in git-bash on windows | |
| run: | | |
| ls -R repo | |
| - name: Add repos to .Rprofile | |
| shell: Rscript {0} | |
| run: | | |
| profile_path <- file.path(getwd(), ".Rprofile") | |
| repo <- paste0("file://", getwd(), "/repo") | |
| str <- paste0("options(arrow.repo = '", repo, "' )") | |
| print(str) | |
| write(str, file = profile_path, append = TRUE) | |
| str <- paste0("options(arrow.dev_repo = '", repo, "' )") | |
| print(str) | |
| write(str, file = profile_path, append = TRUE) | |
| # Set envvar for later steps by appending to $GITHUB_ENV | |
| write(paste0("R_PROFILE_USER=", profile_path), file = Sys.getenv("GITHUB_ENV"), append = TRUE) | |
| - name: Install arrow from our repo | |
| env: | |
| ARROW_R_DEV: "TRUE" | |
| LIBARROW_BUILD: "FALSE" | |
| LIBARROW_BINARY: ${{ matrix.config.libarrow_binary }} | |
| ARROW_R_ENFORCE_CHECKSUM: "true" | |
| ARROW_R_CHECKSUM_PATH: "${{ github.workspace }}/repo/libarrow/bin" | |
| shell: bash | |
| run: | | |
| Rscript -e ' | |
| source("https://raw.githubusercontent.com/apache/arrow/HEAD/ci/etc/rprofile") | |
| # always remove arrow (mainly for self-hosted runners) | |
| try(remove.packages("arrow"), silent = TRUE) | |
| install.packages( | |
| "arrow", | |
| repos = c(getOption("arrow.dev_repo"), getOption("repos")), | |
| verbose = TRUE, | |
| type = "source", | |
| INSTALL_opts = "--build" | |
| ) | |
| library(arrow) | |
| read_parquet(system.file("v0.7.1.parquet", package = "arrow")) | |
| print(arrow_info()) | |
| # Our Version should always be > CRAN so we would detect a CRAN version here. | |
| stopifnot(packageVersion("arrow") == "${{needs.source.outputs.pkg_version}}") | |
| ' | |
| - name: Upload binary artifact | |
| if: matrix.config.devtoolset | |
| uses: actions/upload-artifact@v3 | |
| with: | |
| name: r-pkg_centos7 | |
| path: arrow_* | |
| test-centos-binary: | |
| # arrow binary package not on ppm currently see #37922 | |
| if: false | |
| needs: test-linux-binary | |
| runs-on: ubuntu-latest | |
| container: "rstudio/r-base:4.2-centos7" | |
| steps: | |
| - uses: actions/download-artifact@v3 | |
| with: | |
| name: r-pkg_centos7 | |
| - name: Install DTS Package | |
| shell: Rscript {0} | |
| run: | | |
| pkg <- list.files(pattern = "arrow_*") | |
| if(length(pkg) > 1) { | |
| pkg <- pkg[[1]] | |
| warning("Multiple packages found! Using first one.") | |
| } | |
| # Install dependencies from RSPM | |
| install.packages("arrow", repos = "https://packagemanager.rstudio.com/all/__linux__/centos7/latest") | |
| remove.packages("arrow") | |
| install.packages(pkg) | |
| library(arrow) | |
| read_parquet(system.file("v0.7.1.parquet", package = "arrow")) | |
| print(arrow_info()) | |
| test-source: | |
| needs: source | |
| name: Test ${{ matrix.platform.name }} source build | |
| runs-on: ${{ matrix.platform.runs_on }} | |
| strategy: | |
| fail-fast: false | |
| matrix: | |
| platform: | |
| - {runs_on: "ubuntu-latest", name: "Linux"} | |
| - {runs_on: ["self-hosted", "macos-10.13"] , name: "macOS"} | |
| steps: | |
| - name: Install R | |
| if: matrix.platform.name == 'Linux' | |
| uses: r-lib/actions/setup-r@v2 | |
| # TODO: improve arg handling | |
| - name: Setup local repo | |
| shell: bash | |
| run: mkdir repo | |
| - name: Get src pkg | |
| uses: actions/download-artifact@v3 | |
| with: | |
| name: r-pkg__src__contrib | |
| path: repo/src/contrib | |
| - name: Update repo index | |
| shell: Rscript {0} | |
| run: | | |
| # getwd() is necessary as this macro is used within jobs using a docker container | |
| tools::write_PACKAGES(file.path(getwd(), "repo/src/contrib", fsep = "/"), type = "source", verbose = TRUE) | |
| - name: Show repo | |
| shell: bash | |
| # tree not available in git-bash on windows | |
| run: | | |
| ls -R repo | |
| - name: Add repos to .Rprofile | |
| shell: Rscript {0} | |
| run: | | |
| profile_path <- file.path(getwd(), ".Rprofile") | |
| repo <- paste0("file://", getwd(), "/repo") | |
| str <- paste0("options(arrow.repo = '", repo, "' )") | |
| print(str) | |
| write(str, file = profile_path, append = TRUE) | |
| str <- paste0("options(arrow.dev_repo = '", repo, "' )") | |
| print(str) | |
| write(str, file = profile_path, append = TRUE) | |
| # Set envvar for later steps by appending to $GITHUB_ENV | |
| write(paste0("R_PROFILE_USER=", profile_path), file = Sys.getenv("GITHUB_ENV"), append = TRUE) | |
| - name: Checkout Arrow | |
| uses: actions/checkout@v3 | |
| with: | |
| fetch-depth: 1 | |
| path: arrow | |
| repository: paleolimbot/arrow | |
| ref: 9b9186aa2f75d6cbe354369aa9e7d4e0c9a86041 | |
| submodules: recursive | |
| - name: Install sccache | |
| if: matrix.platform.name == 'Linux' | |
| shell: bash | |
| run: | | |
| arrow/ci/scripts/install_sccache.sh unknown-linux-musl /usr/local/bin | |
| - name: Install R package system dependencies (Linux) | |
| if: matrix.platform.name == 'Linux' | |
| run: sudo apt-get install -y libcurl4-openssl-dev libssl-dev | |
| - name: Remove arrow/ | |
| run: | | |
| rm -rf arrow/ | |
| - name: Enable parallel build | |
| run: | | |
| cores=`nproc || sysctl -n hw.logicalcpu` | |
| echo "MAKEFLAGS=-j$cores" >> $GITHUB_ENV | |
| - name: Install arrow source package | |
| env: | |
| # Test source build so be sure not to download a binary | |
| LIBARROW_BINARY: "FALSE" | |
| AWS_ACCESS_KEY_ID: "${{ secrets.AWS_ACCESS_KEY_ID }}" | |
| AWS_SECRET_ACCESS_KEY: "${{ secrets.AWS_SECRET_ACCESS_KEY }}" | |
| SCCACHE_BUCKET: "${{ secrets.SCCACHE_BUCKET }}" | |
| SCCACHE_REGION: "${{ secrets.SCCACHE_REGION }}" | |
| SCCACHE_S3_KEY_PREFIX: "sccache" | |
| shell: Rscript {0} | |
| run: | | |
| source("https://raw.githubusercontent.com/apache/arrow/HEAD/ci/etc/rprofile") | |
| # always remove arrow (mainly for self-hosted runners) | |
| try(remove.packages("arrow"), silent = TRUE) | |
| install.packages( | |
| "arrow", | |
| repos = c(getOption("arrow.dev_repo"), getOption("repos")), | |
| verbose = TRUE, | |
| type = "source", | |
| INSTALL_opts = "--build" | |
| ) | |
| library(arrow) | |
| read_parquet(system.file("v0.7.1.parquet", package = "arrow")) | |
| print(arrow_info()) | |
| # Our Version should always be > CRAN so we would detect a CRAN version here. | |
| stopifnot(packageVersion("arrow") == "${{needs.source.outputs.pkg_version}}") | |
| - name: Retry with verbosity if that failed | |
| if: failure() | |
| env: | |
| LIBARROW_BINARY: "FALSE" | |
| ARROW_R_DEV: "TRUE" | |
| CMAKE_FIND_DEBUG_MODE: "ON" | |
| AWS_ACCESS_KEY_ID: "${{ secrets.AWS_ACCESS_KEY_ID }}" | |
| AWS_SECRET_ACCESS_KEY: "${{ secrets.AWS_SECRET_ACCESS_KEY }}" | |
| SCCACHE_BUCKET: "${{ secrets.SCCACHE_BUCKET }}" | |
| SCCACHE_REGION: "${{ secrets.SCCACHE_REGION }}" | |
| SCCACHE_S3_KEY_PREFIX: "sccache" | |
| shell: Rscript {0} | |
| run: | | |
| source("https://raw.githubusercontent.com/apache/arrow/HEAD/ci/etc/rprofile") | |
| # always remove arrow (mainly for self-hosted runners) | |
| try(remove.packages("arrow"), silent = TRUE) | |
| install.packages( | |
| "arrow", | |
| repos = c(getOption("arrow.dev_repo"), getOption("repos")), | |
| verbose = TRUE, | |
| type = "source", | |
| INSTALL_opts = "--build" | |
| ) | |
| library(arrow) | |
| read_parquet(system.file("v0.7.1.parquet", package = "arrow")) | |
| print(arrow_info()) | |
| # Our Version should always be > CRAN so we would detect a CRAN version here. | |
| stopifnot(packageVersion("arrow") == "${{needs.source.outputs.pkg_version}}") | |
| upload-binaries: | |
| # Only upload binaries if all tests pass. | |
| needs: [r-packages, test-source, test-linux-binary] | |
| name: Upload artifacts | |
| runs-on: ubuntu-latest | |
| steps: | |
| - name: Checkout Arrow | |
| uses: actions/checkout@v4 | |
| with: | |
| fetch-depth: 1 | |
| path: arrow | |
| repository: paleolimbot/arrow | |
| ref: 9b9186aa2f75d6cbe354369aa9e7d4e0c9a86041 | |
| submodules: recursive | |
| - name: Download Artifacts | |
| uses: actions/download-artifact@v3 | |
| with: | |
| path: artifacts | |
| - name: Install R | |
| uses: r-lib/actions/setup-r@v2 | |
| with: | |
| install-r: false | |
| - name: Rename artifacts | |
| shell: Rscript {0} | |
| run: | | |
| file_paths <- list.files("artifacts", include.dirs = FALSE, recursive = TRUE) | |
| new_names <- file.path("binaries", sub("/", "__", file_paths)) | |
| dir.create("binaries", showWarnings = FALSE) | |
| file.copy(file.path("artifacts", file_paths), new_names) | |
| - name: Set up Python by actions/setup-python | |
| if: runner.arch == 'X64' | |
| uses: actions/setup-python@v4 | |
| with: | |
| python-version: 3.8 | |
| - name: Set up Python by apt | |
| if: runner.os == 'Linux' && runner.arch != 'X64' | |
| run: | | |
| sudo apt update | |
| sudo apt install -y \ | |
| libgit2-dev \ | |
| libpython3-dev \ | |
| python3-pip | |
| sudo python3 -m pip install --upgrade pip | |
| - name: Checkout Crossbow | |
| uses: actions/checkout@v4 | |
| with: | |
| path: crossbow | |
| ref: actions-0487ce50cd | |
| - name: Setup Crossbow | |
| shell: bash | |
| run: | | |
| python3 -m pip install -e arrow/dev/archery[crossbow] | |
| echo "$HOME/.local/bin" >> $GITHUB_PATH | |
| - name: Upload artifacts | |
| shell: bash | |
| run: | | |
| archery crossbow \ | |
| --queue-path $(pwd)/crossbow \ | |
| --queue-remote https://github.com/ursacomputing/crossbow \ | |
| upload-artifacts \ | |
| --sha actions-0487ce50cd-github-r-binary-packages \ | |
| --tag actions-0487ce50cd-github-r-binary-packages \ | |
| "binaries/r-*" | |
| env: | |
| CROSSBOW_GITHUB_TOKEN: ${{ secrets.CROSSBOW_GITHUB_TOKEN || secrets.GITHUB_TOKEN }} | |
| - name: Verify uploaded artifacts | |
| shell: bash | |
| run: | | |
| archery crossbow \ | |
| --queue-path $(pwd)/crossbow \ | |
| --queue-remote https://github.com/ursacomputing/crossbow \ | |
| status \ | |
| --task-filter 'r-binary-packages' \ | |
| --no-fetch \ | |
| --validate \ | |
| actions-0487ce50cd | |
| env: | |
| CROSSBOW_GITHUB_TOKEN: ${{ secrets.CROSSBOW_GITHUB_TOKEN || secrets.GITHUB_TOKEN }} |