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Release 1.1.0 #584

Merged
merged 145 commits into from
Dec 14, 2021
Merged

Release 1.1.0 #584

merged 145 commits into from
Dec 14, 2021

Commits on Oct 19, 2021

  1. Add more comments on the code.

    @CraigMiloRogers
    CraigMiloRogers committed Oct 19, 2021
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  2. The primary output file is not necessarily standard output.

    @CraigMiloRogers
    CraigMiloRogers committed Oct 19, 2021
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Commits on Oct 20, 2021

  1. Lifting strings with language filtering.

    @CraigMiloRogers
    CraigMiloRogers committed Oct 20, 2021
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Commits on Oct 21, 2021

  1. Add prioritized language processing.

    @CraigMiloRogers
    CraigMiloRogers committed Oct 21, 2021
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Commits on Oct 25, 2021

  1. Merge remote-tracking branch 'origin/issue/511/add-labels-language-fi… 

    …ltering' into dev
    @CraigMiloRogers
    CraigMiloRogers committed Oct 25, 2021
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  2. Merge branch 'issue/532/count-records' into dev

    @CraigMiloRogers
    CraigMiloRogers committed Oct 25, 2021
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Commits on Oct 27, 2021

  1. remove table linker index to another notebook

    @saggu
    saggu committed Oct 27, 2021
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  2. move table linker to anothernotebook

    @saggu
    saggu committed Oct 27, 2021
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  3. add notebook for table-linker

    @saggu
    saggu committed Oct 27, 2021
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  4. add required files

    @saggu
    saggu committed Oct 27, 2021
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  5. cleanup notebooks

    @saggu
    saggu committed Oct 27, 2021
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Commits on Oct 29, 2021

  1. Add 'cls.' to access class members.

    @CraigMiloRogers
    CraigMiloRogers committed Oct 29, 2021
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  2. Use the corrected version of mgzip.

    @CraigMiloRogers
    CraigMiloRogers committed Oct 29, 2021
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Commits on Oct 31, 2021

  1. must end with blank line

    Pedro Szekely committed Oct 31, 2021
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  2. Merge branch 'dev' of https://github.com/usc-isi-i2/kgtk into dev

    Pedro Szekely committed Oct 31, 2021
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  3. fix input path, don't move outputs

    Pedro Szekely committed Oct 31, 2021
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Commits on Nov 1, 2021

  1. Document SQLITE_TMPDIR environment variable

    @chalypso
    chalypso committed Nov 1, 2021
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  2. Merge branch 'dev' of https://github.com/usc-isi-i2/kgtk into dev

    Pedro Szekely committed Nov 1, 2021
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  3. Implement len and substring.

    @CraigMiloRogers
    CraigMiloRogers committed Nov 1, 2021
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  4. Merge remote-tracking branch 'origin/issue/560/substring' into dev

    @CraigMiloRogers
    CraigMiloRogers committed Nov 1, 2021
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Commits on Nov 2, 2021

  1. Support alternating --old/--new options.

    @CraigMiloRogers
    CraigMiloRogers committed Nov 2, 2021
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  2. Fix --show-options.

    @CraigMiloRogers
    CraigMiloRogers committed Nov 2, 2021
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  3. Optionally rename columns when reordering them. All columns must be r… 

    …enamed.
    @CraigMiloRogers
    CraigMiloRogers committed Nov 2, 2021
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  4. Add --overwrite.

    @CraigMiloRogers
    CraigMiloRogers committed Nov 2, 2021
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  5. Improve the exception handling.

    @CraigMiloRogers
    CraigMiloRogers committed Nov 2, 2021
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  6. set multiprocessing method to fork

    @saggu
    saggu committed Nov 2, 2021
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  7. mac specific defaults

    @saggu
    saggu committed Nov 2, 2021
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  8. Merge branch 'dev' of https://github.com/usc-isi-i2/kgtk into dev

    @saggu
    saggu committed Nov 2, 2021
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  9. add notebook to import wikidata

    @saggu
    saggu committed Nov 2, 2021
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  10. python version

    @saggu
    saggu committed Nov 2, 2021
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Commits on Nov 3, 2021

  1. en labels only, add note to import all languages

    @saggu
    saggu committed Nov 3, 2021
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  2. fix typo

    @saggu
    saggu committed Nov 3, 2021
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  3. Fix the default value of --overwrite due to cut-and-paste error.

    @CraigMiloRogers
    CraigMiloRogers committed Nov 3, 2021
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Commits on Nov 4, 2021

  1. Add files via upload

    @GrantXie
    GrantXie committed Nov 4, 2021
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  2. Auto-configure temp dir to better support large data imports 

    Added commit at end of index creation to ensure we are not losing
anything.
    @chalypso
    chalypso committed Nov 4, 2021
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  3. Updated doc for temp directory handling

    @chalypso
    chalypso committed Nov 4, 2021
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  4. Added short forms for graph cache options

    @chalypso
    chalypso committed Nov 4, 2021
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Commits on Nov 5, 2021

  1. Support "stdin" as an implicit name for inputs from stdin

    @chalypso
    chalypso committed Nov 5, 2021
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  2. Fix documentation for inputs from stdin

    @chalypso
    chalypso committed Nov 5, 2021
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  3. Implement read-only processing 

    Improved normalization of stdin files to properly support a 'stdin'
alias without causing the system to hang.
    @chalypso
    chalypso committed Nov 5, 2021
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  4. Support new read-only processing

    @chalypso
    chalypso committed Nov 5, 2021
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  5. Support new read-only processing

    @chalypso
    chalypso committed Nov 5, 2021
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  6. Document read-only processing

    @chalypso
    chalypso committed Nov 5, 2021
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  7. Enhance substring with --to-string.

    @CraigMiloRogers
    CraigMiloRogers committed Nov 5, 2021
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  8. Merge branch 'dev' of github.com:usc-isi-i2/kgtk into dev

    @CraigMiloRogers
    CraigMiloRogers committed Nov 5, 2021
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Commits on Nov 9, 2021

  1. Create community-detection

    @GrantXie
    GrantXie committed Nov 9, 2021
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  2. Update community-detection

    @GrantXie
    GrantXie committed Nov 9, 2021
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  3. Update community-detection

    @GrantXie
    GrantXie committed Nov 9, 2021
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  4. Update community-detection

    @GrantXie
    GrantXie committed Nov 9, 2021
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  5. Update community-detection

    @GrantXie
    GrantXie committed Nov 9, 2021
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  6. Create community-detection

    @GrantXie
    GrantXie committed Nov 9, 2021
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  7. Update community-detection

    @GrantXie
    GrantXie committed Nov 9, 2021
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  8. Update community-detection

    @GrantXie
    GrantXie committed Nov 9, 2021
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  9. Update community-detection

    @GrantXie
    GrantXie committed Nov 9, 2021
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  10. Update community-detection

    @GrantXie
    GrantXie committed Nov 9, 2021
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  11. Update community-detection

    @GrantXie
    GrantXie committed Nov 9, 2021
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  12. Update community-detection

    @GrantXie
    GrantXie committed Nov 9, 2021
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  13. Update community-detection

    @GrantXie
    GrantXie committed Nov 9, 2021
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  14. Create community-detection.md

    @GrantXie
    GrantXie committed Nov 9, 2021
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  15. Delete community-detection

    @GrantXie
    GrantXie committed Nov 9, 2021
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  16. Update community-detection.md

    @GrantXie
    GrantXie committed Nov 9, 2021
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  17. Added shortest distance for breadth first search

    @GrantXie
    GrantXie committed Nov 9, 2021
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  18. Fixed a bug in blockmodel

    @GrantXie
    GrantXie committed Nov 9, 2021
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Commits on Nov 10, 2021

  1. Refactor calc for improved understandability, extensibility, and effi… 

    …ciency.
    @CraigMiloRogers
    CraigMiloRogers committed Nov 10, 2021
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  2. Implement group-by calculations.

    @CraigMiloRogers
    CraigMiloRogers committed Nov 10, 2021
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  3. Give more control over the group-by output record.

    @CraigMiloRogers
    CraigMiloRogers committed Nov 10, 2021
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  4. Correct argument checks on several 2-arg operations. Add several nume… 

    …ric operations.
    @CraigMiloRogers
    CraigMiloRogers committed Nov 10, 2021
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  5. Need anothe rlevel of parens in validating argument combinations.

    @CraigMiloRogers
    CraigMiloRogers committed Nov 10, 2021
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Commits on Nov 11, 2021

  1. Make --into optional if --filter is supplied for operators producing … 

    …boolean results.
    @CraigMiloRogers
    CraigMiloRogers committed Nov 11, 2021
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  2. Recognize .csv files based on extension.

    @CraigMiloRogers
    CraigMiloRogers committed Nov 11, 2021
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  3. Add files via upload

    @GrantXie
    GrantXie committed Nov 11, 2021
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Commits on Nov 12, 2021

  1. modernalize, clean

    @saggu
    saggu committed Nov 12, 2021
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  2. Merge branch 'dev' of https://github.com/usc-isi-i2/kgtk into dev

    @saggu
    saggu committed Nov 12, 2021
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  3. Fix in documentation

    @dgarijo
    dgarijo committed Nov 12, 2021
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Commits on Nov 15, 2021

  1. COnfigure for home workstation.

    @CraigMiloRogers
    CraigMiloRogers committed Nov 15, 2021
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  2. Merge branch 'dev' of github.com:usc-isi-i2/kgtk into dev

    @CraigMiloRogers
    CraigMiloRogers committed Nov 15, 2021
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  3. Fix detection of compressed CSV files.

    @CraigMiloRogers
    CraigMiloRogers committed Nov 15, 2021
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  4. Document CSV input file processing.

    @CraigMiloRogers
    CraigMiloRogers committed Nov 15, 2021
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  5. Show an example of reading a CSV file.

    @CraigMiloRogers
    CraigMiloRogers committed Nov 15, 2021
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Commits on Nov 16, 2021

  1. Added distance and dist-col-name options

    @GrantXie
    GrantXie committed Nov 16, 2021
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  2. Accept strings as well as Paths.

    @CraigMiloRogers
    CraigMiloRogers committed Nov 16, 2021
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  3. Implement kgtk --mode.

    @CraigMiloRogers
    CraigMiloRogers committed Nov 16, 2021
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Commits on Nov 17, 2021

  1. Fix improper indentation.

    @CraigMiloRogers
    CraigMiloRogers committed Nov 17, 2021
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  2. Add --write-namespaces.

    @CraigMiloRogers
    CraigMiloRogers committed Nov 17, 2021
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  3. Add an example for --write-namespaces=FALSE.

    @CraigMiloRogers
    CraigMiloRogers committed Nov 17, 2021
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  4. Fix indentation problem.

    @CraigMiloRogers
    CraigMiloRogers committed Nov 17, 2021
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  5. Add an upper case enum list.

    @CraigMiloRogers
    CraigMiloRogers committed Nov 17, 2021
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  6. Use the default mode.

    @CraigMiloRogers
    CraigMiloRogers committed Nov 17, 2021
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  7. Merge branch 'dev' of github.com:usc-isi-i2/kgtk into dev

    @CraigMiloRogers
    CraigMiloRogers committed Nov 17, 2021
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  8. Improved parallel pipeline segments.

    @CraigMiloRogers
    CraigMiloRogers committed Nov 17, 2021
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Commits on Nov 18, 2021

  1. Do not close standard output.

    @CraigMiloRogers
    CraigMiloRogers committed Nov 18, 2021
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  2. Implement parallel pipes.

    @CraigMiloRogers
    CraigMiloRogers committed Nov 18, 2021
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  3. Fix bug in --progress-debug.

    @CraigMiloRogers
    CraigMiloRogers committed Nov 18, 2021
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  4. Document the interaction between --props and --inverted-props.

    @CraigMiloRogers
    CraigMiloRogers committed Nov 18, 2021
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  5. Try harder to terminate pipelines.

    @CraigMiloRogers
    CraigMiloRogers committed Nov 18, 2021
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  6. Merge.

    @CraigMiloRogers
    CraigMiloRogers committed Nov 18, 2021
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  7. Implement --overwrite more efficiently. Impoement --overwrite for sub… 

    …string.
    @CraigMiloRogers
    CraigMiloRogers committed Nov 18, 2021
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Commits on Nov 19, 2021

  1. Fix editing error.

    @CraigMiloRogers
    CraigMiloRogers committed Nov 19, 2021
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  2. Add some string manipulation functions.

    @CraigMiloRogers
    CraigMiloRogers committed Nov 19, 2021
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  3. Add parsers for dates, strings, and numbers.

    @CraigMiloRogers
    CraigMiloRogers committed Nov 19, 2021
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  4. Remove inneeded item.

    @CraigMiloRogers
    CraigMiloRogers committed Nov 19, 2021
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  5. Add a fast path for date extraction.

    @CraigMiloRogers
    CraigMiloRogers committed Nov 19, 2021
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  6. Change --default-mode to --kgtkmode to avoid conflict. Use /. instead… 

    … of /, .
    @CraigMiloRogers
    CraigMiloRogers committed Nov 19, 2021
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Commits on Nov 22, 2021

  1. use configure KGTK

    @saggu
    saggu committed Nov 22, 2021
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Commits on Nov 23, 2021

  1. Merge pull request #1 from usc-isi-i2/dev 

    Dev
    @GrantXie
    GrantXie committed Nov 23, 2021
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  2. Added a distance column (with options)

    @GrantXie
    GrantXie committed Nov 23, 2021
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  3. Create CONTRIBUTING.md

    @dgarijo
    dgarijo committed Nov 23, 2021
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  4. Add files via upload

    @GrantXie
    GrantXie committed Nov 23, 2021
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  5. Merge pull request #580 from GrantXie/dev 

    Created community-detection command and its readme file
    @CraigMiloRogers
    CraigMiloRogers committed Nov 23, 2021
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  6. Delete community-detection.py

    @GrantXie
    GrantXie committed Nov 23, 2021
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  7. Delete community-detection.md

    @GrantXie
    GrantXie committed Nov 23, 2021
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  8. Merge branch 'dev' into dev_2

    @GrantXie
    GrantXie committed Nov 23, 2021
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Commits on Nov 30, 2021

  1. Merge pull request #581 from GrantXie/dev_2 

    Added distance column to reachable_nodes
    @CraigMiloRogers
    CraigMiloRogers committed Nov 30, 2021
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Commits on Dec 1, 2021

  1. Fix typo in error message.

    @CraigMiloRogers
    CraigMiloRogers committed Dec 1, 2021
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Commits on Dec 4, 2021

  1. Refactored query option normalization to enable reuse in API 

    Also improved handling of empty inputs to not automatically use stdin,
nevertheless empty files need to be allowed for --show-cache.
    @chalypso
    chalypso committed Dec 4, 2021
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  2. New query definition option that supports shell-style command syntax

    @chalypso
    chalypso committed Dec 4, 2021
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Commits on Dec 6, 2021

  1. update build table linker command

    @saggu
    saggu committed Dec 6, 2021
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  2. update python version

    @saggu
    saggu committed Dec 6, 2021
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  3. Merge branch 'dev' of https://github.com/usc-isi-i2/kgtk into dev

    @saggu
    saggu committed Dec 6, 2021
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  4. recommended python version is 3.9

    @saggu
    saggu committed Dec 6, 2021
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  5. update python and kgtk version

    @saggu
    saggu committed Dec 6, 2021
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  6. update release version

    @saggu
    saggu committed Dec 6, 2021
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  7. fix broken link

    @saggu
    saggu committed Dec 6, 2021
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  8. change python recommendation to 3.9

    @saggu
    saggu committed Dec 6, 2021
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  9. add link to docker installation

    @saggu
    saggu committed Dec 6, 2021
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Commits on Dec 7, 2021

  1. add languages filter

    @saggu
    saggu committed Dec 7, 2021
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  2. Merge branch 'dev' of https://github.com/usc-isi-i2/kgtk into dev

    @saggu
    saggu committed Dec 7, 2021
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  3. Summarize lists.

    @CraigMiloRogers
    CraigMiloRogers committed Dec 7, 2021
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  4. Fix a typo in a comment. Note places where quanties might be supporte… 

    …d. Add a fast path for numbers in list_sum.
    @CraigMiloRogers
    CraigMiloRogers committed Dec 7, 2021
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  5. Merge pull request #2 from usc-isi-i2/dev 

    Dev
    @GrantXie
    GrantXie committed Dec 7, 2021
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  6. Add files via upload

    @GrantXie
    GrantXie committed Dec 7, 2021
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  7. Add files via upload

    @GrantXie
    GrantXie committed Dec 7, 2021
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  8. Merge pull request #586 from GrantXie/dev_1 

    Community Detection command (accidentally deleted from previous PR)
    @CraigMiloRogers
    CraigMiloRogers committed Dec 7, 2021
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Commits on Dec 8, 2021

  1. Use continue to reduce indentation. Support quantities for abs_op.

    @CraigMiloRogers
    CraigMiloRogers committed Dec 8, 2021
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  2. Support quantities in --do minus.

    @CraigMiloRogers
    CraigMiloRogers committed Dec 8, 2021
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  3. Document an inconsistency in combining numbers and quantities.

    @CraigMiloRogers
    CraigMiloRogers committed Dec 8, 2021
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Commits on Dec 10, 2021

  1. Extract dates.

    @CraigMiloRogers
    CraigMiloRogers committed Dec 10, 2021
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  2. Add class methods to assist in converting Python bools to/from KGTK b… 

    …ooleans.
    @CraigMiloRogers
    CraigMiloRogers committed Dec 10, 2021
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  3. Add a convenience method for writing KGTK from Python values.

    @CraigMiloRogers
    CraigMiloRogers committed Dec 10, 2021
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Commits on Dec 11, 2021

  1. Add helper routines for building KGTK date_and_times and location_coo… 

    …rdinates values.
    @CraigMiloRogers
    CraigMiloRogers committed Dec 11, 2021
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  2. Improve the format-driven KGTK writer.

    @CraigMiloRogers
    CraigMiloRogers committed Dec 11, 2021
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  3. Make the format optional. Detect excess values.

    @CraigMiloRogers
    CraigMiloRogers committed Dec 11, 2021
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  4. Fix typo.

    @CraigMiloRogers
    CraigMiloRogers committed Dec 11, 2021
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  5. Fix typos.

    @CraigMiloRogers
    CraigMiloRogers committed Dec 11, 2021
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Commits on Dec 14, 2021

  1. remove docker lite

    @saggu
    saggu committed Dec 14, 2021
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